Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

40S ribosomal protein S2

Gene

rps-2

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-CEL-72702. Ribosomal scanning and start codon recognition.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S2
Gene namesi
Name:rps-2
ORF Names:C49H3.11
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC49H3.11; CE04237; WBGene00004471; rps-2.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001316771 – 27240S ribosomal protein S2Add BLAST272

Proteomic databases

EPDiP51403.
PaxDbiP51403.
PeptideAtlasiP51403.
PRIDEiP51403.

PTM databases

iPTMnetiP51403.

Expressioni

Gene expression databases

BgeeiWBGene00004471.

Interactioni

Protein-protein interaction databases

BioGridi42699. 3 interactors.
DIPiDIP-25206N.
IntActiP51403. 3 interactors.
MINTiMINT-228946.
STRINGi6239.C49H3.11.3.

Structurei

3D structure databases

ProteinModelPortaliP51403.
SMRiP51403.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini98 – 161S5 DRBMPROSITE-ProRule annotationAdd BLAST64

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0877. Eukaryota.
COG0098. LUCA.
GeneTreeiENSGT00390000001433.
HOGENOMiHOG000072596.
InParanoidiP51403.
KOiK02981.
OMAiPHTVPMK.
OrthoDBiEOG091G0LPC.
PhylomeDBiP51403.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
InterProiView protein in InterPro
IPR000851. Ribosomal_S5.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR005711. Ribosomal_S5_euk/arc.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiView protein in Pfam
PF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR01020. uS5_euk_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.

Sequencei

Sequence statusi: Complete.

P51403-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADRGGFQSG FGGRGGGRGG ARPAGDRPAG RGGRGGRGGR GGRGGRAGRG
60 70 80 90 100
GEKETEWTPV TKLGRLVKEK KITTLEEIYL NSLPIKEFEI IDALCSNLKD
110 120 130 140 150
EVLKISPVQK QTTAGQRTRF KAFVAIGDHA GHVGLGVKCS KEVATAIRGA
160 170 180 190 200
IVAAKLAVVP VRRGYWGNKI GLPHTVPCKV TGKCASVMVR LIPAPRGTGI
210 220 230 240 250
VSAPVPKKLL HMAGIEDCYT AAKGSTATLG NFAKATYAAL QRTYSYLTPD
260 270
LWKEEALEKS PYQRHHEYLA RN
Length:272
Mass (Da):28,960
Last modified:October 1, 1996 - v1
Checksum:i60049F6B7DB8CB34
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080908 Genomic DNA. Translation: CCD67711.1.
PIRiT34184.
RefSeqiNP_501322.1. NM_068921.5.
UniGeneiCel.23413.

Genome annotation databases

EnsemblMetazoaiC49H3.11.1; C49H3.11.1; WBGene00004471.
C49H3.11.2; C49H3.11.2; WBGene00004471.
GeneIDi177583.
KEGGicel:CELE_C49H3.11.
UCSCiC49H3.11.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080908 Genomic DNA. Translation: CCD67711.1.
PIRiT34184.
RefSeqiNP_501322.1. NM_068921.5.
UniGeneiCel.23413.

3D structure databases

ProteinModelPortaliP51403.
SMRiP51403.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi42699. 3 interactors.
DIPiDIP-25206N.
IntActiP51403. 3 interactors.
MINTiMINT-228946.
STRINGi6239.C49H3.11.3.

PTM databases

iPTMnetiP51403.

Proteomic databases

EPDiP51403.
PaxDbiP51403.
PeptideAtlasiP51403.
PRIDEiP51403.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC49H3.11.1; C49H3.11.1; WBGene00004471.
C49H3.11.2; C49H3.11.2; WBGene00004471.
GeneIDi177583.
KEGGicel:CELE_C49H3.11.
UCSCiC49H3.11.1. c. elegans.

Organism-specific databases

CTDi177583.
WormBaseiC49H3.11; CE04237; WBGene00004471; rps-2.

Phylogenomic databases

eggNOGiKOG0877. Eukaryota.
COG0098. LUCA.
GeneTreeiENSGT00390000001433.
HOGENOMiHOG000072596.
InParanoidiP51403.
KOiK02981.
OMAiPHTVPMK.
OrthoDBiEOG091G0LPC.
PhylomeDBiP51403.

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-CEL-72702. Ribosomal scanning and start codon recognition.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiPR:P51403.

Gene expression databases

BgeeiWBGene00004471.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
InterProiView protein in InterPro
IPR000851. Ribosomal_S5.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR005711. Ribosomal_S5_euk/arc.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiView protein in Pfam
PF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR01020. uS5_euk_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS2_CAEEL
AccessioniPrimary (citable) accession number: P51403
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: June 7, 2017
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.