Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Chalcone synthase RJ5

Gene
N/A
Organism
Fragaria ananassa (Strawberry)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Catalytic activityi

3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.PROSITE-ProRule annotation

Pathway:iflavonoid biosynthesis

This protein is involved in the pathway flavonoid biosynthesis, which is part of Secondary metabolite biosynthesis.
View all proteins of this organism that are known to be involved in the pathway flavonoid biosynthesis and in Secondary metabolite biosynthesis.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Acyltransferase, Transferase

Keywords - Biological processi

Flavonoid biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00154.

Names & Taxonomyi

Protein namesi
Recommended name:
Chalcone synthase RJ5 (EC:2.3.1.74)
Alternative name(s):
Naringenin-chalcone synthase
OrganismiFragaria ananassa (Strawberry)
Taxonomic identifieri3747 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesRosaceaeRosoideaePotentilleaeFragariinaeFragaria

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 99›99Chalcone synthase RJ5PRO_0000215976Add
BLAST

Expressioni

Tissue specificityi

Predominantly in developing fruit.

Developmental stagei

Expression of the protein is enhanced in a ripening fruit.

Structurei

3D structure databases

ProteinModelPortaliP51076.
SMRiP51076. Positions 2-98.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the chalcone/stilbene synthases family.Curated

Family and domain databases

Gene3Di3.40.47.10. 1 hit.
InterProiIPR012328. Chalcone/stilbene_synth_C.
IPR016039. Thiolase-like.
[Graphical view]
PfamiPF02797. Chal_sti_synt_C. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 1 hit.

Sequencei

Sequence statusi: Fragment.

P51076-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
NITDWNSLFW IAHPGGPAIL DQVEAKLALK PEKLEATRHI LSEYGNMSSA
60 70 80 90
CVLFILDEVR RKSAANGHKT TGEGLEWGVL FGFGPGLTVE TVVLHSVSA
Length:99
Mass (Da):10,715
Last modified:October 1, 1996 - v1
Checksum:i38F83B45F6B1179B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19942 mRNA. Translation: AAA79923.1.
PIRiS56675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19942 mRNA. Translation: AAA79923.1.
PIRiS56675.

3D structure databases

ProteinModelPortaliP51076.
SMRiP51076. Positions 2-98.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayiUPA00154.

Family and domain databases

Gene3Di3.40.47.10. 1 hit.
InterProiIPR012328. Chalcone/stilbene_synth_C.
IPR016039. Thiolase-like.
[Graphical view]
PfamiPF02797. Chal_sti_synt_C. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Identification of mRNAs with enhanced expression in ripening strawberry fruit using polymerase chain reaction differential display."
    Wilkinson J.Q., Lanahan M.B., Conner T.W., Klee H.J.
    Plant Mol. Biol. 27:1097-1108(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Pajaro.
    Tissue: Fruit.

Entry informationi

Entry nameiCHSY_FRAAN
AccessioniPrimary (citable) accession number: P51076
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: July 22, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.