Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Chalcone synthase RJ5

Gene
N/A
Organism
Fragaria ananassa (Strawberry)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Catalytic activityi

3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.PROSITE-ProRule annotation

Pathwayi

GO - Molecular functioni

  1. naringenin-chalcone synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. flavonoid biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Acyltransferase, Transferase

Keywords - Biological processi

Flavonoid biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00154.

Names & Taxonomyi

Protein namesi
Recommended name:
Chalcone synthase RJ5 (EC:2.3.1.74)
Alternative name(s):
Naringenin-chalcone synthase
OrganismiFragaria ananassa (Strawberry)
Taxonomic identifieri3747 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesRosaceaeRosoideaePotentilleaeFragariinaeFragaria

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 99›99Chalcone synthase RJ5PRO_0000215976Add
BLAST

Expressioni

Tissue specificityi

Predominantly in developing fruit.

Developmental stagei

Expression of the protein is enhanced in a ripening fruit.

Structurei

3D structure databases

ProteinModelPortaliP51076.
SMRiP51076. Positions 2-98.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the chalcone/stilbene synthases family.Curated

Family and domain databases

Gene3Di3.40.47.10. 1 hit.
InterProiIPR012328. Chalcone/stilbene_synth_C.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
PfamiPF02797. Chal_sti_synt_C. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 1 hit.

Sequencei

Sequence statusi: Fragment.

P51076-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
NITDWNSLFW IAHPGGPAIL DQVEAKLALK PEKLEATRHI LSEYGNMSSA
60 70 80 90
CVLFILDEVR RKSAANGHKT TGEGLEWGVL FGFGPGLTVE TVVLHSVSA
Length:99
Mass (Da):10,715
Last modified:October 1, 1996 - v1
Checksum:i38F83B45F6B1179B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19942 mRNA. Translation: AAA79923.1.
PIRiS56675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19942 mRNA. Translation: AAA79923.1.
PIRiS56675.

3D structure databases

ProteinModelPortaliP51076.
SMRiP51076. Positions 2-98.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayiUPA00154.

Family and domain databases

Gene3Di3.40.47.10. 1 hit.
InterProiIPR012328. Chalcone/stilbene_synth_C.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
PfamiPF02797. Chal_sti_synt_C. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Identification of mRNAs with enhanced expression in ripening strawberry fruit using polymerase chain reaction differential display."
    Wilkinson J.Q., Lanahan M.B., Conner T.W., Klee H.J.
    Plant Mol. Biol. 27:1097-1108(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Pajaro.
    Tissue: Fruit.

Entry informationi

Entry nameiCHSY_FRAAN
AccessioniPrimary (citable) accession number: P51076
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 1, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.