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P51007

- FNRL_RHOS4

UniProt

P51007 - FNRL_RHOS4

Protein

Transcriptional activator protein FnrL

Gene

fnrL

Organism
Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 91 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes.

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    DNA bindingi191 – 21020H-T-H motifPROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Molecular functioni

    Activator

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding, Iron

    Enzyme and pathway databases

    BioCyciRSPH272943:GJAS-2364-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Transcriptional activator protein FnrL
    Gene namesi
    Name:fnrL
    Ordered Locus Names:RHOS4_23060
    ORF Names:RSP_0698
    OrganismiRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
    Taxonomic identifieri272943 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
    ProteomesiUP000002703: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 248248Transcriptional activator protein FnrLPRO_0000100180Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi272943.RSP_0698.

    Structurei

    3D structure databases

    ProteinModelPortaliP51007.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini154 – 23279HTH crp-typePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 cyclic nucleotide-binding domain.PROSITE-ProRule annotation
    Contains 1 HTH crp-type DNA-binding domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG0664.
    HOGENOMiHOG000186462.
    KOiK01420.
    OMAiCDADELE.
    OrthoDBiEOG6TBHH3.
    PhylomeDBiP51007.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    2.60.120.10. 1 hit.
    InterProiIPR018490. cNMP-bd-like.
    IPR000595. cNMP-bd_dom.
    IPR012318. HTH_CRP_2.
    IPR014710. RmlC-like_jellyroll.
    IPR001808. Tscrpt_reg_HTH_Crp.
    IPR018335. Tscrpt_reg_HTH_Crp-type_CS.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00027. cNMP_binding. 1 hit.
    [Graphical view]
    PRINTSiPR00034. HTHCRP.
    SMARTiSM00100. cNMP. 1 hit.
    SM00419. HTH_CRP. 1 hit.
    [Graphical view]
    SUPFAMiSSF51206. SSF51206. 1 hit.
    PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
    PS00042. HTH_CRP_1. 1 hit.
    PS51063. HTH_CRP_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P51007-1 [UniParc]FASTAAdd to Basket

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    MTLHEVPTIL HRCGDCPIRH RAVCARCDSE ELATLEQIKY YRSYQAGQTV    50
    IWSGDKMDFV ASVVTGIATL TQTMEDGRRQ MVGLLLPSDF VGRPGRQTVA 100
    YDVTATTDLL MCCFRRKPFE EMMQKTPHVG QRLLEMTLDE LDAAREWMLL 150
    LGRKTAREKI ASLLAIIARR DAALKLRESN GPMTFDLPLT REEMADYLGL 200
    TLETVSRQVS ALKRDGVIAL EGKRHVIVTD FARLLEEAGD DSDGGLPV 248
    Length:248
    Mass (Da):27,800
    Last modified:October 1, 1996 - v1
    Checksum:i788F5BB365AE7DAD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z49746 Genomic DNA. Translation: CAA89820.1.
    CP000143 Genomic DNA. Translation: ABA79874.1.
    RefSeqiWP_002720880.1. NZ_AKVW01000001.1.
    YP_353775.1. NC_007493.2.

    Genome annotation databases

    EnsemblBacteriaiABA79874; ABA79874; RSP_0698.
    GeneIDi3718176.
    KEGGirsp:RSP_0698.
    PATRICi23154559. VBIRhoSph57909_2650.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z49746 Genomic DNA. Translation: CAA89820.1 .
    CP000143 Genomic DNA. Translation: ABA79874.1 .
    RefSeqi WP_002720880.1. NZ_AKVW01000001.1.
    YP_353775.1. NC_007493.2.

    3D structure databases

    ProteinModelPortali P51007.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272943.RSP_0698.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA79874 ; ABA79874 ; RSP_0698 .
    GeneIDi 3718176.
    KEGGi rsp:RSP_0698.
    PATRICi 23154559. VBIRhoSph57909_2650.

    Phylogenomic databases

    eggNOGi COG0664.
    HOGENOMi HOG000186462.
    KOi K01420.
    OMAi CDADELE.
    OrthoDBi EOG6TBHH3.
    PhylomeDBi P51007.

    Enzyme and pathway databases

    BioCyci RSPH272943:GJAS-2364-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    2.60.120.10. 1 hit.
    InterProi IPR018490. cNMP-bd-like.
    IPR000595. cNMP-bd_dom.
    IPR012318. HTH_CRP_2.
    IPR014710. RmlC-like_jellyroll.
    IPR001808. Tscrpt_reg_HTH_Crp.
    IPR018335. Tscrpt_reg_HTH_Crp-type_CS.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00027. cNMP_binding. 1 hit.
    [Graphical view ]
    PRINTSi PR00034. HTHCRP.
    SMARTi SM00100. cNMP. 1 hit.
    SM00419. HTH_CRP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51206. SSF51206. 1 hit.
    PROSITEi PS50042. CNMP_BINDING_3. 1 hit.
    PS00042. HTH_CRP_1. 1 hit.
    PS51063. HTH_CRP_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Aerobic and anaerobic regulation in Rhodobacter sphaeroides 2.4.1: the role of the fnrL gene."
      Zeilstra-Ryalls J.H., Kaplan S.
      J. Bacteriol. 177:6422-6431(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
      Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158.

    Entry informationi

    Entry nameiFNRL_RHOS4
    AccessioniPrimary (citable) accession number: P51007
    Secondary accession number(s): Q3J010
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 91 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Possesses 4 cysteines which may bind a metal ion (possibly iron).

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3