P50993 (AT1A2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 138.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sodium/potassium-transporting ATPase subunit alpha-2 Short name=Na(+)/K(+) ATPase alpha-2 subunit EC=3.6.3.9 Alternative name(s): Sodium pump subunit alpha-2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1020 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium, providing the energy for active transport of various nutrients. |
| Catalytic activity | ATP + H2O + Na+(In) + K+(Out) = ADP + phosphate + Na+(Out) + K+(In). |
| Subunit structure | Composed of three subunits: alpha (catalytic), beta and gamma. |
| Subcellular location | Membrane; Multi-pass membrane protein. Cell membrane; Multi-pass membrane protein Ref.9. |
| Involvement in disease | Familial hemiplegic migraine 2 (FHM2) [MIM:602481]: A subtype of migraine with aura associated with hemiparesis in some families. Migraine is a disabling symptom complex of periodic headaches, usually temporal and unilateral. Headaches are often accompanied by irritability, nausea, vomiting and photobia, preceded by constriction of the cranial arteries. Migraine with aura is characterized by recurrent attacks of reversible neurological symptoms (aura) that precede or accompany the headache. Aura may include a combination of sensory disturbances, such as blurred vision, hallucinations, vertigo, numbness and difficulty in concentrating and speaking. Alternating hemiplegia of childhood 1 (AHC1) [MIM:104290]: A rare syndrome of episodic hemi- or quadriplegia lasting minutes to days. Most cases are accompanied by dystonic posturing, choreoathetoid movements, nystagmus, other ocular motor abnormalities, autonomic disturbances, and progressive cognitive impairment. It is typically distinguished from familial hemiplegic migraine by infantile onset and high prevalence of associated neurological deficits that become increasingly obvious with age. |
| Sequence similarities | Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIC subfamily. [View classification] |
| Sequence caution | The sequence BAA34498.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Propeptide | 1 – 5 | 5 | By similarity | PRO_0000002503 | |||||
| Chain | 6 – 1020 | 1015 | Sodium/potassium-transporting ATPase subunit alpha-2 | PRO_0000002504 | |||||
Regions | |||||||||
| Topological domain | 6 – 85 | 80 | Cytoplasmic Potential | ||||||
| Transmembrane | 86 – 106 | 21 | Helical; Potential | ||||||
| Topological domain | 107 – 129 | 23 | Extracellular Potential | ||||||
| Transmembrane | 130 – 150 | 21 | Helical; Potential | ||||||
| Topological domain | 151 – 286 | 136 | Cytoplasmic Potential | ||||||
| Transmembrane | 287 – 306 | 20 | Helical; Potential | ||||||
| Topological domain | 307 – 318 | 12 | Extracellular Potential | ||||||
| Transmembrane | 319 – 336 | 18 | Helical; Potential | ||||||
| Topological domain | 337 – 769 | 433 | Cytoplasmic Potential | ||||||
| Transmembrane | 770 – 789 | 20 | Helical; Potential | ||||||
| Topological domain | 790 – 799 | 10 | Extracellular Potential | ||||||
| Transmembrane | 800 – 820 | 21 | Helical; Potential | ||||||
| Topological domain | 821 – 840 | 20 | Cytoplasmic Potential | ||||||
| Transmembrane | 841 – 863 | 23 | Helical; Potential | ||||||
| Topological domain | 864 – 915 | 52 | Extracellular Potential | ||||||
| Transmembrane | 916 – 935 | 20 | Helical; Potential | ||||||
| Topological domain | 936 – 948 | 13 | Cytoplasmic Potential | ||||||
| Transmembrane | 949 – 967 | 19 | Helical; Potential | ||||||
| Topological domain | 968 – 982 | 15 | Extracellular Potential | ||||||
| Transmembrane | 983 – 1003 | 21 | Helical; Potential | ||||||
| Topological domain | 1004 – 1020 | 17 | Cytoplasmic Potential | ||||||
| Region | 80 – 82 | 3 | Interaction with phosphoinositide-3 kinase By similarity | ||||||
Sites | |||||||||
| Active site | 374 | 1 | 4-aspartylphosphate intermediate By similarity | ||||||
| Metal binding | 714 | 1 | Magnesium By similarity | ||||||
| Metal binding | 718 | 1 | Magnesium By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 570 | 1 | Phosphothreonine Ref.10 | ||||||
| Modified residue | 587 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 650 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 940 | 1 | Phosphoserine; by PKA By similarity | ||||||
Natural variations | |||||||||
| Natural variant | 378 | 1 | T → N in AHC1. Ref.13 Corresponds to variant rs28934002 [ dbSNP | Ensembl ]. | VAR_019934 | |||||
| Natural variant | 689 | 1 | R → Q in FHM2. Ref.11 Corresponds to variant rs28933401 [ dbSNP | Ensembl ]. | VAR_019935 | |||||
| Natural variant | 715 | 1 | G → R in FHM2; de novo mutation in a sporadic case. Ref.14 | VAR_065685 | |||||
| Natural variant | 731 | 1 | M → T in FHM2. Ref.11 Corresponds to variant rs28933400 [ dbSNP | Ensembl ]. | VAR_019936 | |||||
| Natural variant | 764 | 1 | L → P in FHM2; loss of function. Ref.12 Corresponds to variant rs28933398 [ dbSNP | Ensembl ]. | VAR_019937 | |||||
| Natural variant | 887 | 1 | W → R in FHM2; loss of function. Ref.12 Corresponds to variant rs28933399 [ dbSNP | Ensembl ]. | VAR_019938 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of the human Na,K-ATPase alpha 2 gene and identification of intragenic restriction fragment length polymorphisms." Shull M.M., Pugh D.G., Lingrel J.B. J. Biol. Chem. 264:17532-17543(1989) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Ishikawa K., Suyama M., Kikuno R., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:277-286(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [3] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary. |
| [6] | "Multiple genes encode the human Na+,K+-ATPase catalytic subunit." Shull M.M., Lingrel J.B. Proc. Natl. Acad. Sci. U.S.A. 84:4039-4043(1987) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 211-249. Tissue: Leukocyte. |
| [7] | "The family of human Na+,K+-ATPase genes. No less than five genes and/or pseudogenes related to the alpha-subunit." Sverdlov E.D., Monastyrskaya G.S., Broude N.E., Ushkaryov Y.A., Allikmets R.L., Melkov A.M., Smirnov Y.V., Malyshev I.V., Dulubova I.E., Petrukhin K.E., Gryshin A.V., Kiyatkin N.I., Kostina M.B., Sverdlov V.E., Modyanov N.N., Ovchinnikov Y.A. FEBS Lett. 217:275-278(1987) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 251-442. Tissue: Brain and Placenta. |
| [8] | "Family of human Na+,K+-ATPase genes. Structure of the putative regulatory region of the alpha+-gene." Sverdlov E.D., Bessarab D.A., Malyshev I.V., Petrukhin K.E., Smirnov Y.V., Ushkaryov Y.A., Monastyrskaya G.S., Broude N.E., Modyanov N.N. FEBS Lett. 244:481-483(1989) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-4. |
| [9] | "Subcellular distribution and immunocytochemical localization of Na,K-ATPase subunit isoforms in human skeletal muscle." Hundal H.S., Maxwell D.L., Ahmed A., Darakhshan F., Mitsumoto Y., Klip A. Mol. Membr. Biol. 11:255-262(1994) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-570 AND SER-587, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "Novel mutations in the Na+, K+-ATPase pump gene ATP1A2 associated with familial hemiplegic migraine and benign familial infantile convulsions." Vanmolkot K.R.J., Kors E.E., Hottenga J.-J., Terwindt G.M., Haan J., Hoefnagels W.A.J., Black D.F., Sandkuijl L.A., Frants R.R., Ferrari M.D., van den Maagdenberg A.M.J.M. Ann. Neurol. 54:360-366(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS FHM2 GLN-689 AND THR-731. |
| [12] | "Haploinsufficiency of ATP1A2 encoding the Na+/K+ pump alpha2 subunit associated with familial hemiplegic migraine type 2." De Fusco M., Marconi R., Silvestri L., Atorino L., Rampoldi L., Morgante L., Ballabio A., Aridon P., Casari G. Nat. Genet. 33:192-196(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS FHM2 PRO-764 AND ARG-887, CHARACTERIZATION OF VARIANTS FMH2 PRO-764 AND ARG-887. |
| [13] | "Alternating hemiplegia of childhood or familial hemiplegic migraine? A novel ATP1A2 mutation." Swoboda K.J., Kanavakis E., Xaidara A., Johnson J.E., Leppert M.F., Schlesinger-Massart M.B., Ptacek L.J., Silver K., Youroukos S. Ann. Neurol. 55:884-887(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT AHC1 ASN-378. |
| [14] | "Prolonged sporadic hemiplegic migraine associated with a novel de novo missense ATP1A2 gene mutation." De Sanctis S., Grieco G.S., Breda L., Casali C., Nozzi M., Del Torto M., Chiarelli F., Verrotti A. Headache 51:447-450(2011) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT FHM2 ARG-715. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | J05096 Genomic DNA. Translation: AAA51797.1. AB018321 mRNA. Translation: BAA34498.2. Different initiation. AL121987 Genomic DNA. Translation: CAI15271.1. CH471121 Genomic DNA. Translation: EAW52740.1. CH471121 Genomic DNA. Translation: EAW52741.1. BC052271 mRNA. Translation: AAH52271.2. M16795 mRNA. Translation: AAA51799.1. M27578, M27571, M27576 Genomic DNA. Translation: AAA35575.1. Y07494 mRNA. Translation: CAA68793.1. Sequence problems. |
| IPI | IPI00003021. |
| PIR | A34474. |
| RefSeq | NP_000693.1. NM_000702.3. |
| UniGene | Hs.34114. |
3D structure databases | |
| ProteinModelPortal | P50993. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P50993. 1 interaction. |
| STRING | 9606.ENSP00000354490. |
Protein family/group databases | |
| TCDB | 3.A.3.1.1. P-type ATPase (P-ATPase) superfamily. |
PTM databases | |
| PhosphoSite | P50993. |
Polymorphism databases | |
| DMDM | 1703467. |
Proteomic databases | |
| PaxDb | P50993. |
| PRIDE | P50993. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000361216; ENSP00000354490; ENSG00000018625. |
| GeneID | 477. |
| KEGG | hsa:477. |
| UCSC | uc001fvb.2. human. |
Organism-specific databases | |
| CTD | 477. |
| GeneCards | GC01P160085. |
| HGNC | HGNC:800. ATP1A2. |
| HPA | CAB022230. |
| MIM | 104290. phenotype. 182340. gene. 602481. phenotype. |
| neXtProt | NX_P50993. |
| Orphanet | 2131. Alternating hemiplegia of childhood. 569. Familial or sporadic hemiplegic migraine. |
| PharmGKB | PA30796. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0474. |
| HOGENOM | HOG000265622. |
| HOVERGEN | HBG004298. |
| InParanoid | P50993. |
| KO | K01539. |
| OMA | IINIPLP. |
| OrthoDB | EOG46MBHS. |
Enzyme and pathway databases | |
| Reactome | REACT_15518. Transmembrane transport of small molecules. |
Gene expression databases | |
| ArrayExpress | P50993. |
| Bgee | P50993. |
| CleanEx | HS_ATP1A2. |
| Genevestigator | P50993. |
| GermOnline | ENSG00000018625. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.20.1110.10. 2 hits. 2.70.150.10. 2 hits. 3.40.1110.10. 1 hit. |
| InterPro | IPR006068. ATPase_P-typ_cation-transptr_C. IPR004014. ATPase_P-typ_cation-transptr_N. IPR023299. ATPase_P-typ_cyto_domN. IPR005775. ATPase_P-typ_Na/K_IIC. IPR018303. ATPase_P-typ_P_site. IPR023298. ATPase_P-typ_TM_dom. IPR008250. ATPase_P-typ_transduc_dom_A. IPR001757. Cation_transp_P_typ_ATPase. IPR023214. HAD-like_dom. [Graphical view] |
| PANTHER | PTHR24093. PTHR24093. 1 hit. |
| Pfam | PF00689. Cation_ATPase_C. 1 hit. PF00690. Cation_ATPase_N. 1 hit. PF00122. E1-E2_ATPase. 1 hit. PF00702. Hydrolase. 1 hit. [Graphical view] |
| PRINTS | PR00119. CATATPASE. |
| SMART | SM00831. Cation_ATPase_N. 1 hit. [Graphical view] |
| SUPFAM | SSF81660. ATPase_cation_domN. 1 hit. SSF56784. HAD-like_dom. 1 hit. |
| TIGRFAMs | TIGR01106. ATPase-IIC_X-K. 1 hit. TIGR01494. ATPase_P-type. 2 hits. |
| PROSITE | PS00154. ATPASE_E1_E2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | P50993. |
| ChEMBL | CHEMBL2715. |
| ChiTaRS | ATP1A2. human. |
| GenomeRNAi | 477. |
| NextBio | 1977. |
| SOURCE | Search... |
Entry information
| Entry name | AT1A2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P50993 Secondary accession number(s): D3DVE4 Q9UQ25 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
