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P50885

- RL18_TRYB2

UniProt

P50885 - RL18_TRYB2

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Protein

60S ribosomal protein L18

Gene
RPL18-A, Tb10.6k15.0410
RPL18-B, Tb11.02.1840
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L18
Gene namesi
Name:RPL18-A
ORF Names:Tb10.6k15.0410
AND
Name:RPL18-B
ORF Names:Tb11.02.1840
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
Taxonomic identifieri999953 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 11 Scaffold 1

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 19319360S ribosomal protein L18PRO_0000132779Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb11.02.1840.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57I1-193[»]
ProteinModelPortaliP50885.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1727.
HOGENOMiHOG000213425.
KOiK02883.
OMAiINAGGEC.

Family and domain databases

InterProiIPR000039. Ribosomal_L18e.
IPR021131. Ribosomal_L18e/L15P.
IPR021132. Ribosomal_L18e_CS.
[Graphical view]
PANTHERiPTHR10934. PTHR10934. 1 hit.
PfamiPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
PROSITEiPS01106. RIBOSOMAL_L18E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P50885-1 [UniParc]FASTAAdd to Basket

« Hide

MGVDLTGVQK KKRVVRHHTY STNPYIKLLI KLYKFLGKRT NSPFNKLIHK    50
RLLKSRNNRA PISLSRIAVC MRRRTVWLKK GKKSPIAVIV GDVLDDVRMT 100
RIPALRICAL RFSKSARERI TGAGGECLTF DQLAMMAPTG KNTMLLRGRK 150
SGRESVKHFG AAGVPGSHAK PHVSSRGKER QRSSKRRHAF RHK 193
Length:193
Mass (Da):21,874
Last modified:October 1, 1996 - v1
Checksum:i350856090EAD0388
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U47286 mRNA. Translation: AAC47428.1.
CM000208 Genomic DNA. Translation: EAN78382.1.
CH464491 Genomic DNA. Translation: EAN79394.1.
RefSeqiXP_823210.1. XM_818117.1.
XP_828506.1. XM_823413.1.

Genome annotation databases

GeneIDi3661727.
3664868.
KEGGitbr:Tb10.6k15.0410.
tbr:Tb11.02.1840.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U47286 mRNA. Translation: AAC47428.1 .
CM000208 Genomic DNA. Translation: EAN78382.1 .
CH464491 Genomic DNA. Translation: EAN79394.1 .
RefSeqi XP_823210.1. XM_818117.1.
XP_828506.1. XM_823413.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 I 1-193 [» ]
ProteinModelPortali P50885.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb11.02.1840.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3661727.
3664868.
KEGGi tbr:Tb10.6k15.0410.
tbr:Tb11.02.1840.

Phylogenomic databases

eggNOGi COG1727.
HOGENOMi HOG000213425.
KOi K02883.
OMAi INAGGEC.

Family and domain databases

InterProi IPR000039. Ribosomal_L18e.
IPR021131. Ribosomal_L18e/L15P.
IPR021132. Ribosomal_L18e_CS.
[Graphical view ]
PANTHERi PTHR10934. PTHR10934. 1 hit.
Pfami PF00828. Ribosomal_L18e. 1 hit.
[Graphical view ]
SUPFAMi SSF52080. SSF52080. 1 hit.
PROSITEi PS01106. RIBOSOMAL_L18E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The cloning and sequencing of a ribosomal L18 protein from an evolutionary divergent eukaryote, Trypanosoma brucei."
    Coulter L.J., Hide G.
    Biochim. Biophys. Acta 1309:69-72(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1.

Entry informationi

Entry nameiRL18_TRYB2
AccessioniPrimary (citable) accession number: P50885
Secondary accession number(s): Q385Y7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: June 11, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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