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P50885

- RL18_TRYB2

UniProt

P50885 - RL18_TRYB2

Protein

60S ribosomal protein L18

Gene

RPL18-A

more
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L18
    Gene namesi
    Name:RPL18-A
    ORF Names:Tb10.6k15.0410
    AND
    Name:RPL18-B
    ORF Names:Tb11.02.1840
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 11 Scaffold 1

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 19319360S ribosomal protein L18PRO_0000132779Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb11.02.1840.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57I1-193[»]
    ProteinModelPortaliP50885.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L18e family.Curated

    Phylogenomic databases

    eggNOGiCOG1727.
    HOGENOMiHOG000213425.
    KOiK02883.
    OMAiINAGGEC.

    Family and domain databases

    InterProiIPR000039. Ribosomal_L18e.
    IPR021131. Ribosomal_L18e/L15P.
    IPR021132. Ribosomal_L18e_CS.
    [Graphical view]
    PANTHERiPTHR10934. PTHR10934. 1 hit.
    PfamiPF00828. Ribosomal_L18e. 1 hit.
    [Graphical view]
    SUPFAMiSSF52080. SSF52080. 1 hit.
    PROSITEiPS01106. RIBOSOMAL_L18E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P50885-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGVDLTGVQK KKRVVRHHTY STNPYIKLLI KLYKFLGKRT NSPFNKLIHK    50
    RLLKSRNNRA PISLSRIAVC MRRRTVWLKK GKKSPIAVIV GDVLDDVRMT 100
    RIPALRICAL RFSKSARERI TGAGGECLTF DQLAMMAPTG KNTMLLRGRK 150
    SGRESVKHFG AAGVPGSHAK PHVSSRGKER QRSSKRRHAF RHK 193
    Length:193
    Mass (Da):21,874
    Last modified:October 1, 1996 - v1
    Checksum:i350856090EAD0388
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U47286 mRNA. Translation: AAC47428.1.
    CM000208 Genomic DNA. Translation: EAN78382.1.
    CH464491 Genomic DNA. Translation: EAN79394.1.
    RefSeqiXP_823210.1. XM_818117.1.
    XP_828506.1. XM_823413.1.

    Genome annotation databases

    GeneIDi3661727.
    3664868.
    KEGGitbr:Tb10.6k15.0410.
    tbr:Tb11.02.1840.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U47286 mRNA. Translation: AAC47428.1 .
    CM000208 Genomic DNA. Translation: EAN78382.1 .
    CH464491 Genomic DNA. Translation: EAN79394.1 .
    RefSeqi XP_823210.1. XM_818117.1.
    XP_828506.1. XM_823413.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 I 1-193 [» ]
    ProteinModelPortali P50885.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb11.02.1840.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 3661727.
    3664868.
    KEGGi tbr:Tb10.6k15.0410.
    tbr:Tb11.02.1840.

    Phylogenomic databases

    eggNOGi COG1727.
    HOGENOMi HOG000213425.
    KOi K02883.
    OMAi INAGGEC.

    Family and domain databases

    InterProi IPR000039. Ribosomal_L18e.
    IPR021131. Ribosomal_L18e/L15P.
    IPR021132. Ribosomal_L18e_CS.
    [Graphical view ]
    PANTHERi PTHR10934. PTHR10934. 1 hit.
    Pfami PF00828. Ribosomal_L18e. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52080. SSF52080. 1 hit.
    PROSITEi PS01106. RIBOSOMAL_L18E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The cloning and sequencing of a ribosomal L18 protein from an evolutionary divergent eukaryote, Trypanosoma brucei."
      Coulter L.J., Hide G.
      Biochim. Biophys. Acta 1309:69-72(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1.

    Entry informationi

    Entry nameiRL18_TRYB2
    AccessioniPrimary (citable) accession number: P50885
    Secondary accession number(s): Q385Y7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3