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Protein

Uncharacterized protein YphB

Gene

yphB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU22850-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YphB
Gene namesi
Name:yphB
Ordered Locus Names:BSU22850
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei3 – 23HelicalSequence analysisAdd BLAST21
Transmembranei38 – 58HelicalSequence analysisAdd BLAST21
Transmembranei103 – 123HelicalSequence analysisAdd BLAST21
Transmembranei128 – 148HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000496951 – 297Uncharacterized protein YphBAdd BLAST297

Proteomic databases

PaxDbiP50742.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100012556.

Structurei

3D structure databases

ProteinModelPortaliP50742.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105S2F. Bacteria.
ENOG410XTDQ. LUCA.
HOGENOMiHOG000086714.
KOiK05739.
OMAiQQFRDVR.
PhylomeDBiP50742.

Family and domain databases

InterProiIPR025918. YIEGIA.
[Graphical view]
PfamiPF14045. YIEGIA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P50742-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDYIYPIIA GVIAGIATRL YMLKTDYRQY PTYVHGKVIH IALGLIAAGL
60 70 80 90 100
GAIIMPALLQ EEFTAITFLT LAATQFRDVR NMERNTLTQM DSYELVSRGS
110 120 130 140 150
TYIEGIAIAF ESRNYIVIFT ALLTTSAYVF LSIWAAVIAA VVCFLLAMKF
160 170 180 190 200
MSGSVLKDIV DIEYIKPRFD GPGLFVDNIY MMNIGLPEKQ ELILKHGMGF
210 220 230 240 250
ILTPKNFNSA ATIANLGQRQ AILFDVSNVL GVYRDSGEPS LTPIAKRDLN
260 270 280 290
DGRVAVFVLP QIHHPETAVQ IISNVPTLEN AIRMPTEFIK NQDKVIG
Length:297
Mass (Da):32,932
Last modified:October 1, 1996 - v1
Checksum:i3351B471F655B938
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L47648 Genomic DNA. Translation: AAC83965.1.
AL009126 Genomic DNA. Translation: CAB14201.1.
PIRiH69935.
RefSeqiNP_390166.1. NC_000964.3.
WP_003230562.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB14201; CAB14201; BSU22850.
GeneIDi938990.
KEGGibsu:BSU22850.
PATRICi18976383. VBIBacSub10457_2382.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L47648 Genomic DNA. Translation: AAC83965.1.
AL009126 Genomic DNA. Translation: CAB14201.1.
PIRiH69935.
RefSeqiNP_390166.1. NC_000964.3.
WP_003230562.1. NZ_JNCM01000036.1.

3D structure databases

ProteinModelPortaliP50742.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100012556.

Proteomic databases

PaxDbiP50742.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14201; CAB14201; BSU22850.
GeneIDi938990.
KEGGibsu:BSU22850.
PATRICi18976383. VBIBacSub10457_2382.

Phylogenomic databases

eggNOGiENOG4105S2F. Bacteria.
ENOG410XTDQ. LUCA.
HOGENOMiHOG000086714.
KOiK05739.
OMAiQQFRDVR.
PhylomeDBiP50742.

Enzyme and pathway databases

BioCyciBSUB:BSU22850-MONOMER.

Family and domain databases

InterProiIPR025918. YIEGIA.
[Graphical view]
PfamiPF14045. YIEGIA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYPHB_BACSU
AccessioniPrimary (citable) accession number: P50742
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: September 7, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.