Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P50742 (YPHB_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YphB
Gene names
Name:yphB
Ordered Locus Names:BSU22850
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 297297Uncharacterized protein YphB
PRO_0000049695

Regions

Transmembrane3 – 2321Helical; Potential
Transmembrane38 – 5821Helical; Potential
Transmembrane103 – 12321Helical; Potential
Transmembrane128 – 14821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P50742 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 3351B471F655B938

FASTA29732,932
        10         20         30         40         50         60 
MSDYIYPIIA GVIAGIATRL YMLKTDYRQY PTYVHGKVIH IALGLIAAGL GAIIMPALLQ 

        70         80         90        100        110        120 
EEFTAITFLT LAATQFRDVR NMERNTLTQM DSYELVSRGS TYIEGIAIAF ESRNYIVIFT 

       130        140        150        160        170        180 
ALLTTSAYVF LSIWAAVIAA VVCFLLAMKF MSGSVLKDIV DIEYIKPRFD GPGLFVDNIY 

       190        200        210        220        230        240 
MMNIGLPEKQ ELILKHGMGF ILTPKNFNSA ATIANLGQRQ AILFDVSNVL GVYRDSGEPS 

       250        260        270        280        290 
LTPIAKRDLN DGRVAVFVLP QIHHPETAVQ IISNVPTLEN AIRMPTEFIK NQDKVIG 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of the Bacillus subtilis chromosome region between the serA and kdg loci cloned in a yeast artificial chromosome."
Sorokin A.V., Azevedo V., Zumstein E., Galleron N., Ehrlich S.D., Serror P.
Microbiology 142:2005-2016(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168 / Marburg / ATCC 6051 / DSM 10 / JCM 1465 / NBRC 13719 / NCIMB 3610 / VKM B-501.
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L47648 Genomic DNA. Translation: AAC83965.1.
AL009126 Genomic DNA. Translation: CAB14201.1.
PIRH69935.
RefSeqNP_390166.1. NC_000964.3.

3D structure databases

ProteinModelPortalP50742.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU22850.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB14201; CAB14201; BSU22850.
GeneID938990.
KEGGbsu:BSU22850.
PATRIC18976383. VBIBacSub10457_2382.

Organism-specific databases

GenoListBSU22850.

Phylogenomic databases

HOGENOMHOG000086714.
KOK05739.
OMATDYRQYP.
OrthoDBEOG63VBXD.
PhylomeDBP50742.

Enzyme and pathway databases

BioCycBSUB:BSU22850-MONOMER.

Family and domain databases

InterProIPR025918. YIEGIA.
[Graphical view]
PfamPF14045. YIEGIA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYPHB_BACSU
AccessionPrimary (citable) accession number: P50742
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: July 9, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList