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Reviewed, UniProtKB/Swiss-Prot P50641 (RIR1_HHV7J)

Last modified February 9, 2010. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Ribonucleoside-diphosphate reductase large subunit-like protein U28
Gene names
Name: U28
OrganismHuman herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus)
Taxonomic identifier57278 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeRoseolovirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length806 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the ribonucleoside diphosphate reductase large chain family.

Caution

Lacks the conserved sequence Asn-x-Cys-x-Glu essential for ribonucleotide reductase activity. Its enzyme activity is therefore uncertain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 806806Ribonucleoside-diphosphate reductase large subunit-like protein U28
PRO_0000187239

Sequences

Sequence LengthMass (Da)Tools
P50641-1 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 4BA516084FCCDCC0

FASTA80693,070
        10         20         30         40         50         60 
MDPNNKVSIN KNMGLLRKCL CHDEYNKKRF CYSRFHHKTL LYKQLYEISK ILRRLNSGLD 

        70         80         90        100        110        120 
MWCLRDAIIS ALGAMHDAPH VDRLLGQFYL KTNSASEFDS ISLILESENI LQKELIEFVR 

       130        140        150        160        170        180 
DSKVELEKIL QAAIHVWRAK FSPGVLAASR FLDEISNSFN GIEENIPTIF LRISVTLASQ 

       190        200        210        220        230        240 
IKKIEYLQKS FVSHKCPLVE EILILLYKRV CMLPFPCMSN LGLVSEKKSV FDTVFHNVSN 

       250        260        270        280        290        300 
FSLEDFLDIN SGFFLPAMLN GSYVSVNLTR YHYEAESLME LLLSQLQIVE KDTNKTTGLT 

       310        320        330        340        350        360 
IYLEIWHLSL LMWLDFCEIL PTTVQVKFCL ILPEIFMERL KTENSYWSVF HKALAINLGL 

       370        380        390        400        410        420 
YDESDFTSKY LECERTAEHA RIKTETLLDN ICRCLRRGQM GFIFRKNIHK YSMLPQIASY 

       430        440        450        460        470        480 
CLGNSMDVIP FEYGLNTAFR IALNLSYFVE NVSEEQKSHT NIDMFHYRDK IFNLKKMRKT 

       490        500        510        520        530        540 
VTELVLIGNA VIDYALENRD FLMDGIVNAR SLAICVTGLH SALMSMNLPF NSQLGCQLYR 

       550        560        570        580        590        600 
IVCENIYYSS VRTSMNCCKK GAEPCSFFQR SKYAQGILHC DLYDNVEYTL PNVLWTNLRS 

       610        620        630        640        650        660 
DIKKYGLRNL TFVSGSAMSK EFDLLNCSQS FCPIEGNKIL KRSSIKVLHP NPVFHSDLSV 

       670        680        690        700        710        720 
YSTELQTLYI PVYNGLFLNR FKNHLEYLSS VNYDVSKVNK NLFSEEEMQE MTIFLNAFDY 

       730        740        750        760        770        780 
SVNEMLNMYV GALPFTDHGQ ANVFFINKTE NMRDILVCLY QNGFKTGIYQ AVYKNQKCDG 

       790        800 
VNPSKKFDLL SGFSDGVVMS TMHVFQ 

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References

[1]"Determination and analysis of the complete nucleotide sequence of human herpesvirus."
Nicholas J.
J. Virol. 70:5975-5989(1996) [PubMed: 8709220] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U43400 Genomic DNA. Translation: AAC54690.1.
PIRT41930.
RefSeqYP_073768.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3289486.

Family and domain databases

InterProIPR000788. Ribncl_red_lg_C.
[Graphical view]
PANTHERPTHR11573. Ribncl_red_lg_C. 1 hit.
PfamPF02867. Ribonuc_red_lgC. 1 hit.
[Graphical view]
PRINTSPR01183. RIBORDTASEM1.
PROSITEPS00089. RIBORED_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRIR1_HHV7J
AccessionPrimary (citable) accession number: P50641
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: February 9, 2010
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectVirus (Virus annotation project)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents