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Protein

Uncharacterized protein y4sN

Gene

NGR_a01590

Organism
Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transposition

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4sN
Gene namesi
Ordered Locus Names:NGR_a01590
ORF Names:y4sN
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiSinorhizobium fredii (strain NBRC 101917 / NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001054 Componenti: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002009481 – 125Uncharacterized protein y4sNAdd BLAST125

Family & Domainsi

Sequence similaritiesi

To transposase of insertion sequence IS6501.Curated

Phylogenomic databases

HOGENOMiHOG000254172.
OMAiLEWLMID.
OrthoDBiPOG091H07HG.

Family and domain databases

InterProiIPR025161. Put_IS4/IS5.
[Graphical view]
PfamiPF13340. DUF4096. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P50358-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDCDGLRDDQ WERIRGFVPG GTKGKRGPRT NNRLFLDALL WMARSGGRWR
60 70 80 90 100
DLPERLGDYR AVKRRYYRWI EMGVLDEMLA VLAREADLEW LMIDSTIVRA
110 120
HQHAAGARRA KGGRMPRAWV GLEAG
Length:125
Mass (Da):14,424
Last modified:November 1, 1997 - v2
Checksum:iB692CFFDE1DC2AFE
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti47G → D in CAA52363 (PubMed:8190622).Curated1
Sequence conflicti64R → L in CAA52363 (PubMed:8190622).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91853.1.
X74314 Genomic DNA. Translation: CAA52363.1.
PIRiS35957.
RefSeqiNP_444066.1. NC_000914.2.
WP_010875195.1. NC_012586.1.
YP_002823938.1. NC_012586.1.

Genome annotation databases

EnsemblBacteriaiAAB91853; AAB91853; NGR_a01590.
GeneIDi7789057.
962223.
KEGGirhi:NGR_a01590.
rhi:NGR_b17340.
PATRICi32301025. VBIRhiSp122450_0148.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91853.1.
X74314 Genomic DNA. Translation: CAA52363.1.
PIRiS35957.
RefSeqiNP_444066.1. NC_000914.2.
WP_010875195.1. NC_012586.1.
YP_002823938.1. NC_012586.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91853; AAB91853; NGR_a01590.
GeneIDi7789057.
962223.
KEGGirhi:NGR_a01590.
rhi:NGR_b17340.
PATRICi32301025. VBIRhiSp122450_0148.

Phylogenomic databases

HOGENOMiHOG000254172.
OMAiLEWLMID.
OrthoDBiPOG091H07HG.

Family and domain databases

InterProiIPR025161. Put_IS4/IS5.
[Graphical view]
PfamiPF13340. DUF4096. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY4SN_SINFN
AccessioniPrimary (citable) accession number: P50358
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: November 1, 1997
Last modified: September 7, 2016
This is version 64 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome, Transposable element

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.