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P50358 (Y4SN_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein y4sN
Gene names
Ordered Locus Names:NGR_a01590
ORF Names:y4sN
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length125 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

To transposase of insertion sequence IS6501.

Ontologies

Keywords
   Biological processTransposition
   Technical termComplete proteome
Plasmid
Transposable element
Gene Ontology (GO)
   Biological_processtransposition

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 125125Uncharacterized protein y4sN
PRO_0000200948

Experimental info

Sequence conflict471G → D in CAA52363. Ref.3
Sequence conflict641R → L in CAA52363. Ref.3

Sequences

Sequence LengthMass (Da)Tools
P50358 [UniParc].

Last modified November 1, 1997. Version 2.
Checksum: B692CFFDE1DC2AFE

FASTA12514,424
        10         20         30         40         50         60 
MDCDGLRDDQ WERIRGFVPG GTKGKRGPRT NNRLFLDALL WMARSGGRWR DLPERLGDYR 

        70         80         90        100        110        120 
AVKRRYYRWI EMGVLDEMLA VLAREADLEW LMIDSTIVRA HQHAAGARRA KGGRMPRAWV 


GLEAG 

« Hide

References

« Hide 'large scale' references
[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[3]"Subtraction hybridisation and shot-gun sequencing: a new approach to identify symbiotic loci."
Perret X., Fellay R., Bjourson A.J., Cooper J.E., Brenner S., Broughton W.J.
Nucleic Acids Res. 22:1335-1341(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-123.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91853.1.
X74314 Genomic DNA. Translation: CAA52363.1.
PIRS35957.
RefSeqNP_444066.1. NC_000914.2.
YP_002823938.1. NC_012586.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91853; AAB91853; NGR_a01590.
GeneID7789057.
962223.
KEGGrhi:NGR_a01590.
rhi:NGR_b17340.
PATRIC32301025. VBIRhiSp122450_0148.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3293.
HOGENOMHOG000254172.
OMALEWLMID.
OrthoDBEOG6XWV6M.

Family and domain databases

InterProIPR025161. Put_IS4/IS5.
[Graphical view]
PfamPF13340. DUF4096. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4SN_RHISN
AccessionPrimary (citable) accession number: P50358
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names