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Reviewed, UniProtKB/Swiss-Prot P50167 (ARDH_PICST)

Last modified June 16, 2009. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    D-arabinitol 2-dehydrogenase [ribulose-forming]
      Short name=ARDH
    EC=1.1.1.250
Gene names
Name: ARDH
Synonyms: ARD2
ORF Names: PICST_65696
OrganismPichia stipitis (Yeast) [Complete proteome]
Taxonomic identifier4924 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaePichia

Protein attributes

Sequence length278 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Catalytic activity

D-arabinitol + NAD+ = D-ribulose + NADH.

Pathway

Carbohydrate metabolism; D-arabinitol metabolism.

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Ontologies

Keywords
   LigandNAD
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processoxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionD-arabinitol 2-dehydrogenase activity

Inferred from electronic annotation. Source: EC

binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 278278D-arabinitol 2-dehydrogenase [ribulose-forming]
PRO_0000054519

Regions

Nucleotide binding22 – 4423NAD By similarity

Sites

Active site1811Proton acceptor By similarity
Binding site1661Substrate By similarity

Sequences

Sequence LengthMass (Da)Tools
P50167-1 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 36869165F23964F6

FASTA27830,003
        10         20         30         40         50         60 
MDYSYANVVP NFRLDGRLAI ITGGSGGLAA VISRALLAQG ADVALIDMNL ERTKSAAKEV 

        70         80         90        100        110        120 
LGWGEETLKG EHASAIGQVS AWSCNIGDAE AVDATFSSIN EHHGKIADLL INTAGYCENF 

       130        140        150        160        170        180 
PAETYPATNA ESIMKVNGLG SFYVSQSFAR PLIQNNLRGS IILIGSMSGT IVNDPQPQCM 

       190        200        210        220        230        240 
YNMSKAGVIH LVRSLACEWA KYNIRVNTLS PGYILTPLTR NVISGHTEMK EAWESKIPMK 

       250        260        270 
RMAEPKEFVG SILYLASETA SSYTTGHNLV VDGGYECW 

« Hide

References

« Hide 'large scale' references
[1]"A short-chain dehydrogenase gene from Pichia stipitis having D-arabinitol dehydrogenase activity."
Hallborn J., Walfridsson M., Penttilae M., Keraenen S., Hahn-Haegerdal B.
Yeast 11:839-847(1995) [PubMed: 7483848] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: ATCC 58785 / CBS 6054 / IFO 10063 / NRRL Y-11545.
[2]"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis."
Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M.
Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 58785 / CBS 6054 / IFO 10063 / NRRL Y-11545.

Cross-references

Sequence databases

Z46866 mRNA. Translation: CAA86939.1.
CP000499 Genomic DNA. Translation: ABN67006.1.
PIRS57351.
RefSeqXP_001385035.1.

3D structure databases

HSSPHSSP built from PDB template 1FK8 based on UniProtKB Q9ZFY9.
ModBaseSearch...

Genome annotation databases

GeneID4839199.
KEGGpic:PICST_65696.

Phylogenomic databases

OMAP50167. IVNDPQP.

Enzyme and pathway databases

BRENDA1.1.1.250. 81766.

Family and domain databases

InterProIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHERPTHR19410. ADH_short_C2. 1 hit.
PfamPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSPR00081. GDHRDH.
PR00080. SDRFAMILY.
PROSITEPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameARDH_PICST
AccessionPrimary (citable) accession number: P50167
Secondary accession number(s): A3LUR3
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: June 16, 2009
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents