##gff-version 3 P49768 UniProtKB Chain 1 298 . . . ID=PRO_0000025591;Note=Presenilin-1 NTF subunit P49768 UniProtKB Chain 299 467 . . . ID=PRO_0000025592;Note=Presenilin-1 CTF subunit P49768 UniProtKB Chain 346 467 . . . ID=PRO_0000236055;Note=Presenilin-1 CTF12 P49768 UniProtKB Topological domain 1 82 . . . Note=Cytoplasmic;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 83 103 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 104 132 . . . Note=Lumenal;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 133 153 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 154 166 . . . Note=Cytoplasmic;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 167 189 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 190 194 . . . Note=Lumenal;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 195 216 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 217 220 . . . Note=Cytoplasmic;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 221 241 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 242 248 . . . Note=Lumenal;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 249 272 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 273 380 . . . Note=Cytoplasmic;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 381 401 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 402 407 . . . Note=Lumenal;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 408 428 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 429 432 . . . Note=Cytoplasmic;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Transmembrane 433 453 . . . Note=Helical;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Topological domain 454 467 . . . Note=Lumenal;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26280335;Dbxref=PMID:26280335 P49768 UniProtKB Region 13 68 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P49768 UniProtKB Region 288 290 . . . Note=Important for cleavage of target proteins;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30598546;Dbxref=PMID:30598546 P49768 UniProtKB Region 305 333 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P49768 UniProtKB Region 322 450 . . . Note=Required for interaction with CTNNB1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9738936;Dbxref=PMID:9738936 P49768 UniProtKB Region 372 399 . . . Note=Required for interaction with CTNND2;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10037471;Dbxref=PMID:10037471 P49768 UniProtKB Region 377 381 . . . Note=Important for cleavage of target proteins;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30598546;Dbxref=PMID:30598546 P49768 UniProtKB Region 432 434 . . . Note=Important for cleavage of target proteins;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30598546;Dbxref=PMID:30598546 P49768 UniProtKB Region 464 467 . . . Note=Interaction with MTCH1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10551805;Dbxref=PMID:10551805 P49768 UniProtKB Motif 433 435 . . . Note=PAL;Ontology_term=ECO:0000305;evidence=ECO:0000305|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Compositional bias 13 27 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P49768 UniProtKB Compositional bias 28 47 . . . Note=Basic and acidic residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P49768 UniProtKB Compositional bias 305 329 . . . Note=Basic and acidic residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P49768 UniProtKB Active site 257 257 . . . Ontology_term=ECO:0000305,ECO:0000305,ECO:0000305;evidence=ECO:0000305|PubMed:10206644,ECO:0000305|PubMed:10899933,ECO:0000305|PubMed:15341515;Dbxref=PMID:10206644,PMID:10899933,PMID:15341515 P49768 UniProtKB Active site 385 385 . . . Ontology_term=ECO:0000305,ECO:0000305,ECO:0000305,ECO:0000305,ECO:0000305;evidence=ECO:0000305|PubMed:10206644,ECO:0000305|PubMed:10899933,ECO:0000305|PubMed:15341515,ECO:0000305|PubMed:30598546,ECO:0000305|PubMed:30630874;Dbxref=PMID:10206644,PMID:10899933,PMID:15341515,PMID:30598546,PMID:30630874 P49768 UniProtKB Site 291 292 . . . Note=Cleavage%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9173929;Dbxref=PMID:9173929 P49768 UniProtKB Site 292 293 . . . Note=Cleavage%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9173929;Dbxref=PMID:9173929 P49768 UniProtKB Site 298 299 . . . Note=Cleavage;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9173929;Dbxref=PMID:9173929 P49768 UniProtKB Site 345 346 . . . Note=Cleavage%3B by caspase;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9485372;Dbxref=PMID:9485372 P49768 UniProtKB Modified residue 43 43 . . . Note=Phosphoserine;Ontology_term=ECO:0007744,ECO:0007744,ECO:0007744;evidence=ECO:0007744|PubMed:17081983,ECO:0007744|PubMed:21406692,ECO:0007744|PubMed:23186163;Dbxref=PMID:17081983,PMID:21406692,PMID:23186163 P49768 UniProtKB Modified residue 51 51 . . . Note=Phosphoserine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P97887 P49768 UniProtKB Modified residue 310 310 . . . Note=Phosphoserine%3B by PKA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:14576165;Dbxref=PMID:14576165 P49768 UniProtKB Modified residue 346 346 . . . Note=Phosphoserine%3B by PKC;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:14576165;Dbxref=PMID:14576165 P49768 UniProtKB Modified residue 367 367 . . . Note=Phosphoserine;Ontology_term=ECO:0007744,ECO:0007744;evidence=ECO:0007744|PubMed:21406692,ECO:0007744|PubMed:23186163;Dbxref=PMID:21406692,PMID:23186163 P49768 UniProtKB Alternative sequence 26 29 . . . ID=VSP_005191;Note=In isoform 2 and isoform 3. Missing;Ontology_term=ECO:0000303,ECO:0000303,ECO:0000303;evidence=ECO:0000303|PubMed:15489334,ECO:0000303|PubMed:7596406,ECO:0000303|PubMed:8641442;Dbxref=PMID:15489334,PMID:7596406,PMID:8641442 P49768 UniProtKB Alternative sequence 162 184 . . . ID=VSP_007986;Note=In isoform 4. IHAWLIISSLLLLFFFSFIYLGE->SMRHRSLLSTLFFLWLGILVTVT;Ontology_term=ECO:0000303;evidence=ECO:0000303|Ref.3 P49768 UniProtKB Alternative sequence 185 467 . . . ID=VSP_007987;Note=In isoform 4. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|Ref.3 P49768 UniProtKB Alternative sequence 257 289 . . . ID=VSP_041440;Note=In isoform 7. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 P49768 UniProtKB Alternative sequence 319 467 . . . ID=VSP_005192;Note=In isoform 3 and isoform 5. STERESQDTVAENDDGGFSEEWEAQRDSHLGPHRSTPESRAAVQELSSSILAGEDPEERGVKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDYLVQPFMDQLAFHQFYI->RACLPPAAINLLSIAPMAPRLFMPKGACRPTAQKGSHKTLLQRMMMAGSVRNGKPRGTVI;Ontology_term=ECO:0000303,ECO:0000303;evidence=ECO:0000303|PubMed:8641442,ECO:0000303|Ref.5;Dbxref=PMID:8641442 P49768 UniProtKB Alternative sequence 319 376 . . . ID=VSP_012288;Note=In isoform 6. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 P49768 UniProtKB Natural variant 35 35 . . . ID=VAR_075260;Note=In AD3%3B uncertain significance%3B decreased protease activity with APP. R->Q;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750592,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 79 79 . . . ID=VAR_006413;Note=In AD3%3B also found in late-onset Alzheimer disease%3B impaired protease activity with APP%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio%3B no effect on interaction with GFAP. A->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10631141,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:12058025,ECO:0000269|PubMed:16752394,ECO:0000269|PubMed:17366635,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9384602;Dbxref=dbSNP:rs63749824,PMID:10631141,PMID:11524469,PMID:12058025,PMID:16752394,PMID:17366635,PMID:27930341,PMID:9384602 P49768 UniProtKB Natural variant 82 82 . . . ID=VAR_006414;Note=In AD3%3B decreased protease activity with APP%3B no effect on interaction with GFAP. V->L;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:12058025,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634712;Dbxref=dbSNP:rs63749967,PMID:10441572,PMID:12058025,PMID:27930341,PMID:8634712 P49768 UniProtKB Natural variant 83 83 . . . ID=VAR_075261;Note=In AD3. I->T;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26145164;Dbxref=PMID:26145164 P49768 UniProtKB Natural variant 85 85 . . . ID=VAR_081228;Note=In AD3%3B the patient also manifest spastic paraparesis and apraxia%3B loss of protease activity with APP in vitro%3B altered amyloid-beta production in cells transfected with the mutant and increased amyloid-beta 42/amyloid-beta 40 ratio. L->P;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:15534188,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750599,PMID:15534188,PMID:27930341 P49768 UniProtKB Natural variant 89 89 . . . ID=VAR_081229;Note=In AD3%3B decreased protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. V->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11796781;Dbxref=dbSNP:rs63750815,PMID:11796781 P49768 UniProtKB Natural variant 92 92 . . . ID=VAR_016214;Note=In AD3%3B loss of protease activity with APP. C->S;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11027672,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751141,PMID:11027672,PMID:27930341 P49768 UniProtKB Natural variant 94 94 . . . ID=VAR_081230;Note=In AD3%3B uncertain significance%3B reduced protease activity with APP%3B no relevant change in amyloid-beta 42/amyloid-beta 40 ratio. V->M;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11568920;Dbxref=dbSNP:rs63750831,PMID:11568920 P49768 UniProtKB Natural variant 96 96 . . . ID=VAR_006415;Note=In AD3%3B loss of protease activity with APP. V->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8733303;Dbxref=dbSNP:rs63750601,PMID:27930341,PMID:8733303 P49768 UniProtKB Natural variant 97 97 . . . ID=VAR_081231;Note=In AD3%3B uncertain significance%3B slightly reduced protease activity with APP. V->L;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:15851849,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750852,PMID:15851849,PMID:27930341 P49768 UniProtKB Natural variant 105 105 . . . ID=VAR_009208;Note=In AD3. F->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10631141;Dbxref=dbSNP:rs63750321,PMID:10631141 P49768 UniProtKB Natural variant 113 113 . . . ID=VAR_016215;Note=In frontotemporal dementia. L->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11094121;Dbxref=dbSNP:rs63751399,PMID:11094121 P49768 UniProtKB Natural variant 115 115 . . . ID=VAR_006416;Note=In AD3. Y->C;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:9384602;Dbxref=dbSNP:rs63750450,PMID:11524469,PMID:12552037,PMID:9384602 P49768 UniProtKB Natural variant 115 115 . . . ID=VAR_006417;Note=In AD3%3B impaired protease activity with APP and increased amyloid-beta 42/amyloid-beta 40 ratio. Y->H;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634712;Dbxref=PMID:10441572,PMID:27930341,PMID:8634712 P49768 UniProtKB Natural variant 116 116 . . . ID=VAR_081232;Note=In AD3. T->I;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30200536;Dbxref=dbSNP:rs63750730,PMID:30200536 P49768 UniProtKB Natural variant 116 116 . . . ID=VAR_010120;Note=In AD3%3B unusual amyloid cotton wool plaques detected in one patient's brain%3B severe decrease of protease activity with APP%3B results in increased amyloid-beta 42/amyloid-beta 40 ratio. T->N;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10439444,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:29404783;Dbxref=dbSNP:rs63750730,PMID:10439444,PMID:11524469,PMID:27930341,PMID:29404783 P49768 UniProtKB Natural variant 117 117 . . . ID=VAR_009209;Note=In AD3%3B impaired ability to cleave Ephb2/CTF1%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio%3B impaired regulation of neurite outgrowth. P->L;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:15004326,ECO:0000269|PubMed:17428795,ECO:0000269|PubMed:9507958;Dbxref=dbSNP:rs63749805,PMID:15004326,PMID:17428795,PMID:9507958 P49768 UniProtKB Natural variant 117 117 . . . ID=VAR_081233;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio%3B impaired regulation of neurite outgrowth. P->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:15004326;Dbxref=dbSNP:rs63750550,PMID:15004326 P49768 UniProtKB Natural variant 120 120 . . . ID=VAR_006418;Note=In AD3%3B impaired protease activity with APP and increased amyloid-beta 42/amyloid-beta 40 ratio. E->D;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs63751272,PMID:10441572,PMID:27930341,PMID:9521423 P49768 UniProtKB Natural variant 120 120 . . . ID=VAR_006419;Note=In AD3%3B impaired protease activity with APP and increased amyloid-beta 42/amyloid-beta 40 ratio. E->K;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750800,PMID:27930341 P49768 UniProtKB Natural variant 134 134 . . . ID=VAR_070023;Note=In AD3%3B uncertain significance%3B loss of protease activity with APP. L->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:22503161,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs1595002439,PMID:22503161,PMID:27930341 P49768 UniProtKB Natural variant 135 135 . . . ID=VAR_010121;Note=In AD3%3B impaired protease activity with APP and increased amyloid-beta 42/amyloid-beta 40 ratio. N->D;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9225696;Dbxref=dbSNP:rs63750353,PMID:27930341,PMID:9225696 P49768 UniProtKB Natural variant 139 139 . . . ID=VAR_006420;Note=In AD3. M->I;Dbxref=dbSNP:rs63750522 P49768 UniProtKB Natural variant 139 139 . . . ID=VAR_010122;Note=In AD3. M->K;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9719376;Dbxref=dbSNP:rs63751106,PMID:9719376 P49768 UniProtKB Natural variant 139 139 . . . ID=VAR_006421;Note=In AD3. M->T;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:8634712;Dbxref=dbSNP:rs63751106,PMID:10441572,PMID:8634712 P49768 UniProtKB Natural variant 139 139 . . . ID=VAR_006422;Note=In AD3%3B increased amyloid-beta 42/amyloid-beta 40 ratio. M->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10631141,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7550356;Dbxref=dbSNP:rs63751037,PMID:10631141,PMID:27930341,PMID:7550356 P49768 UniProtKB Natural variant 142 142 . . . ID=VAR_081234;Note=In AD3%3B uncertain significance. V->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:29175279;Dbxref=PMID:29175279 P49768 UniProtKB Natural variant 143 143 . . . ID=VAR_006423;Note=In AD3. I->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10090481;Dbxref=dbSNP:rs63750322,PMID:10090481 P49768 UniProtKB Natural variant 143 143 . . . ID=VAR_006424;Note=In AD3%3B impaired protease activity with APP%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. I->T;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:11568920,ECO:0000269|PubMed:15122701,ECO:0000269|PubMed:16752394,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634711;Dbxref=dbSNP:rs63750004,PMID:11524469,PMID:11568920,PMID:15122701,PMID:16752394,PMID:27930341,PMID:8634711 P49768 UniProtKB Natural variant 146 146 . . . ID=VAR_006425;Note=In AD3. M->I;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:12552037;Dbxref=dbSNP:rs63750391,PMID:11524469,PMID:12552037 P49768 UniProtKB Natural variant 146 146 . . . ID=VAR_006426;Note=In AD3%3B disease phenotype shows high clinical variability%3B founder mutation originating from Southern Italy and distributed worldwide%3B alters the conformation of the active site%3B slightly increased protease activity with APP%3B decreased activity for Notch1 cleavage%3B no loss of its ability to cleave Ephb2/CTF1. M->L;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:17428795,ECO:0000269|PubMed:20164095,ECO:0000269|PubMed:22461631,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7596406;Dbxref=dbSNP:rs63750306,PMID:10441572,PMID:11524469,PMID:17428795,PMID:20164095,PMID:22461631,PMID:27930341,PMID:7596406 P49768 UniProtKB Natural variant 146 146 . . . ID=VAR_006427;Note=In AD3%3B loss of function as calcium-leak channel%3B results in calcium overload in the endoplasmic reticulum. M->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:16959576,ECO:0000269|PubMed:7550356;Dbxref=dbSNP:rs63750306,PMID:11524469,PMID:16959576,PMID:7550356 P49768 UniProtKB Natural variant 147 147 . . . ID=VAR_010123;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. T->I;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750907,PMID:10441572,PMID:27930341 P49768 UniProtKB Natural variant 153 153 . . . ID=VAR_081235;Note=In AD3%3B abolishes protease activity with APP resulting in decreased amyloid-beta 42 and amyloid-beta 40 production. L->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:24495933,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751441,PMID:12552037,PMID:24495933,PMID:27930341 P49768 UniProtKB Natural variant 154 154 . . . ID=VAR_081236;Note=In AD3%3B uncertain significance. Y->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12552037;Dbxref=dbSNP:rs63751292,PMID:12552037 P49768 UniProtKB Natural variant 154 154 . . . ID=VAR_081237;Note=In AD3%3B disease phenotype includes spastic paraparesis%3B abolishes protease activity with APP resulting in decreased amyloid-beta 42 and amyloid-beta 40 production. Y->N;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:15364419,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750588,PMID:15364419,PMID:27930341 P49768 UniProtKB Natural variant 156 156 . . . ID=VAR_075262;Note=In AD3%3B uncertain significance. Y->FTY;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11524469;Dbxref=PMID:11524469 P49768 UniProtKB Natural variant 159 159 . . . ID=VAR_081238;Note=In AD3%3B uncertain significance. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23123781;Dbxref=dbSNP:rs778630379,PMID:23123781 P49768 UniProtKB Natural variant 163 163 . . . ID=VAR_006428;Note=In AD3%3B abolishes protease activity with APP%3B decreased activity for Notch cleavage. H->R;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:22461631,ECO:0000269|PubMed:22503161,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7596406,ECO:0000269|PubMed:8634712,ECO:0000269|PubMed:8733303,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs63750590,PMID:10441572,PMID:11524469,PMID:22461631,PMID:22503161,PMID:27930341,PMID:7596406,PMID:8634712,PMID:8733303,PMID:9521423 P49768 UniProtKB Natural variant 163 163 . . . ID=VAR_006429;Note=In AD3%3B slightly increased protease activity with APP and slightly increased amyloid-beta 42 production. H->Y;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7550356;Dbxref=dbSNP:rs63749885,PMID:27930341,PMID:7550356 P49768 UniProtKB Natural variant 165 165 . . . ID=VAR_010124;Note=In AD3. W->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10441572;Dbxref=dbSNP:rs63751484,PMID:10441572 P49768 UniProtKB Natural variant 166 166 . . . ID=VAR_016216;Note=In AD3%3B onset in adolescence%3B severe decrease of protease activity with APP%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio%3B results in reduced Notch proteolysis. L->P;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12048239,ECO:0000269|PubMed:22529981,ECO:0000269|PubMed:23843529,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750265,PMID:12048239,PMID:22529981,PMID:23843529,PMID:27930341 P49768 UniProtKB Natural variant 168 168 . . . ID=VAR_081239;Note=In AD3%3B uncertain significance%3B abolishes protease activity with APP resulting in decreased amyloid-beta 42 and amyloid-beta 40 production. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12552037;Dbxref=PMID:12552037 P49768 UniProtKB Natural variant 169 169 . . . ID=VAR_006430;Note=In AD3. S->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9831473;Dbxref=dbSNP:rs63751210,PMID:9831473 P49768 UniProtKB Natural variant 169 169 . . . ID=VAR_006431;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. S->P;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10025789,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750418,PMID:10025789,PMID:27930341 P49768 UniProtKB Natural variant 170 170 . . . ID=VAR_081240;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. S->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16344340,ECO:0000269|PubMed:17502474,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:29466804;Dbxref=dbSNP:rs63750577,PMID:16344340,PMID:17502474,PMID:27930341,PMID:29466804 P49768 UniProtKB Natural variant 171 171 . . . ID=VAR_006432;Note=In AD3%3B abolishes protease activity with APP. L->P;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9833068;Dbxref=dbSNP:rs63750963,PMID:12552037,PMID:27930341,PMID:9833068 P49768 UniProtKB Natural variant 173 173 . . . ID=VAR_010125;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->W;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750299,PMID:10441572,PMID:27930341 P49768 UniProtKB Natural variant 174 174 . . . ID=VAR_016217;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->M;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12484344,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751144,PMID:12484344,PMID:27930341 P49768 UniProtKB Natural variant 177 177 . . . ID=VAR_075263;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. F->L;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63749911,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 177 177 . . . ID=VAR_075264;Note=In AD3%3B uncertain significance. F->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11524469;Dbxref=dbSNP:rs63749806,PMID:11524469 P49768 UniProtKB Natural variant 178 178 . . . ID=VAR_075265;Note=In AD3%3B uncertain significance%3B abolishes protease activity with APP. S->P;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750155,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 183 183 . . . ID=VAR_081241;Note=In PIDB and AD3%3B uncertain significance%3B neuropathologic examination of brain sections from a patient shows the presence of Pick bodies and absence of beta-amyloid plaques%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. G->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:15122701,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751068,PMID:15122701,PMID:27930341 P49768 UniProtKB Natural variant 184 184 . . . ID=VAR_081242;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. E->D;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750311,PMID:12552037,PMID:27930341 P49768 UniProtKB Natural variant 205 205 . . . ID=VAR_011876;Note=F->L;Dbxref=dbSNP:rs1042864 P49768 UniProtKB Natural variant 206 206 . . . ID=VAR_016218;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. G->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:11710891,ECO:0000269|PubMed:27073747,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750082,PMID:11524469,PMID:11710891,PMID:27073747,PMID:27930341 P49768 UniProtKB Natural variant 206 206 . . . ID=VAR_081243;Note=In AD3%3B affects APP processing resulting in increased amyloid-beta 42/amyloid-beta 40 ratio%3B does not affect NOTCH processing%3B does not affect endoproteolysis%3B reduced interaction with PEN2%3B results in decreased protein levels in the endoplasmic reticulum but increased levels in early endosome%3B reduced ability to maintain ER calcium homeostasis. G->D;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:21335660,ECO:0000269|PubMed:25394380,ECO:0000269|PubMed:29175279;Dbxref=dbSNP:rs63750082,PMID:21335660,PMID:25394380,PMID:29175279 P49768 UniProtKB Natural variant 206 206 . . . ID=VAR_075266;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. G->S;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750569,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 209 209 . . . ID=VAR_075267;Note=In AD3%3B uncertain significance. G->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11524469;Dbxref=dbSNP:rs63750053,PMID:11524469 P49768 UniProtKB Natural variant 209 209 . . . ID=VAR_009210;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. G->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10447269,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63749880,PMID:10447269,PMID:27930341 P49768 UniProtKB Natural variant 209 209 . . . ID=VAR_006433;Note=In AD3%3B abolishes protease activity with APP. G->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs63750053,PMID:27930341,PMID:9521423 P49768 UniProtKB Natural variant 213 213 . . . ID=VAR_075268;Note=In AD3%3B increases protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. I->L;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750861,PMID:11524469,PMID:26280335,PMID:27930341 P49768 UniProtKB Natural variant 213 213 . . . ID=VAR_006434;Note=In AD3%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. I->T;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:18430735,ECO:0000269|PubMed:8733303;Dbxref=dbSNP:rs63751309,PMID:18430735,PMID:8733303 P49768 UniProtKB Natural variant 214 214 . . . ID=VAR_070024;Note=Found in a patient with dementia%3B uncertain significance. H->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22503161;Dbxref=dbSNP:rs63751003,PMID:22503161 P49768 UniProtKB Natural variant 217 217 . . . ID=VAR_081244;Note=In AD3%3B with unusual amyloid cotton wool plaques%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. G->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:19667325,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs267606983,PMID:19667325,PMID:27930341 P49768 UniProtKB Natural variant 219 219 . . . ID=VAR_010126;Note=In AD3. L->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10208579;Dbxref=dbSNP:rs63750761,PMID:10208579 P49768 UniProtKB Natural variant 222 222 . . . ID=VAR_075269;Note=In AD3%3B uncertain significance%3B slightly increased protease activity with APP and slightly increased amyloid-beta 42/amyloid-beta 40 ratio. Q->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750009,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 229 229 . . . ID=VAR_081245;Note=In AD3%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. I->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63749970,PMID:12552037,PMID:27930341 P49768 UniProtKB Natural variant 231 231 . . . ID=VAR_006435;Note=In AD3%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. A->T;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634712;Dbxref=dbSNP:rs63749836,PMID:10441572,PMID:11524469,PMID:27930341,PMID:8634712 P49768 UniProtKB Natural variant 231 231 . . . ID=VAR_006436;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. A->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16752394,ECO:0000269|PubMed:9384602;Dbxref=dbSNP:rs63750799,PMID:16752394,PMID:9384602 P49768 UniProtKB Natural variant 233 233 . . . ID=VAR_009211;Note=In AD3%3B slightly decreased protease activity with APP resulting in altered amyloid-beta production and mildly increased amyloid-beta 42/amyloid-beta 40 ratio. M->L;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10533070,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751287,PMID:10533070,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 233 233 . . . ID=VAR_006437;Note=In AD3%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. M->T;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9172170;Dbxref=dbSNP:rs63751024,PMID:10441572,PMID:27930341,PMID:9172170 P49768 UniProtKB Natural variant 235 235 . . . ID=VAR_006438;Note=In AD3%3B abolishes protease activity with APP. L->P;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63749835,PMID:10441572,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 235 235 . . . ID=VAR_081246;Note=In AD3%3B abolishes protease activity with APP. L->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:21501661,ECO:0000269|PubMed:27930341;Dbxref=PMID:21501661,PMID:27930341 P49768 UniProtKB Natural variant 235 235 . . . ID=VAR_081247;Note=In AD3%3B reduced APP cleavage resulting in decreased amyloid-beta 42 and amyloid-beta 40 production%3B no relevant change in amyloid-beta 42/amyloid-beta 40 ratio. L->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751130,PMID:12552037,PMID:27930341 P49768 UniProtKB Natural variant 237 237 . . . ID=VAR_081248;Note=In AD3%3B uncertain significance%3B disease phenotype includes spastic paraparesis%3B severe decrease of protease activity with APP%3B results in decreased amyloid-beta 42 and amyloid-beta 40 production. F->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11561050,ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750858,PMID:11561050,PMID:26280335,PMID:27930341 P49768 UniProtKB Natural variant 237 237 . . . ID=VAR_081249;Note=In AD3%3B uncertain significance. F->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12552037;Dbxref=dbSNP:rs63750858,PMID:12552037 P49768 UniProtKB Natural variant 246 246 . . . ID=VAR_006439;Note=In AD3%3B nearly abolishes protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio%3B no loss of its ability to cleave Ephb2/CTF1. A->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:17428795,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7596406;Dbxref=dbSNP:rs63750526,PMID:17428795,PMID:27930341,PMID:7596406 P49768 UniProtKB Natural variant 250 250 . . . ID=VAR_006440;Note=In AD3%3B nearly abolishes protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. L->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751163,PMID:27930341 P49768 UniProtKB Natural variant 260 260 . . . ID=VAR_006441;Note=In AD3%3B nearly abolishes protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio%3B impaired ability to cleave Ephb2/CTF1. A->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:17428795,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7651536,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs63751420,PMID:12552037,PMID:17428795,PMID:27930341,PMID:7651536,PMID:9521423 P49768 UniProtKB Natural variant 261 261 . . . ID=VAR_075270;Note=In AD3%3B nearly abolishes protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. V->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750964,PMID:11524469,PMID:26280335,PMID:27930341 P49768 UniProtKB Natural variant 262 262 . . . ID=VAR_006442;Note=In AD3%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16752394,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750248,PMID:16752394,PMID:27930341 P49768 UniProtKB Natural variant 262 262 . . . ID=VAR_070025;Note=In AD3. L->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22503161;Dbxref=PMID:22503161 P49768 UniProtKB Natural variant 263 263 . . . ID=VAR_081250;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. C->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:16752394;Dbxref=dbSNP:rs63751102,PMID:12552037,PMID:16752394 P49768 UniProtKB Natural variant 263 263 . . . ID=VAR_006443;Note=In AD3%3B decreased protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. C->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750543,PMID:27930341 P49768 UniProtKB Natural variant 264 264 . . . ID=VAR_006444;Note=In AD3%3B decreased protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio%3B impaired ability to cleave Ephb2/CTF1. P->L;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:17428795,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634712,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs63750301,PMID:10441572,PMID:17428795,PMID:27930341,PMID:8634712,PMID:9521423 P49768 UniProtKB Natural variant 266 266 . . . ID=VAR_016219;Note=In AD3%3B nearly abolishes protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. G->S;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11920851,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs121917807,PMID:11920851,PMID:27930341 P49768 UniProtKB Natural variant 267 267 . . . ID=VAR_006445;Note=In AD3%3B decreased protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. P->S;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7550356;Dbxref=dbSNP:rs63751229,PMID:27930341,PMID:7550356 P49768 UniProtKB Natural variant 269 269 . . . ID=VAR_006447;Note=In AD3%3B decreased protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio. R->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751019,PMID:27930341 P49768 UniProtKB Natural variant 269 269 . . . ID=VAR_006448;Note=In AD3. R->H;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12552037;Dbxref=dbSNP:rs63750900,PMID:12552037 P49768 UniProtKB Natural variant 271 271 . . . ID=VAR_016220;Note=In AD3%3B abolishes protease activity with APP. L->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12493737,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750886,PMID:12493737,PMID:27930341 P49768 UniProtKB Natural variant 274 274 . . . ID=VAR_075271;Note=In AD3%3B uncertain significance%3B abolishes protease activity with APP. T->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750284,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 275 275 . . . ID=VAR_081251;Note=In AD3%3B uncertain significance%3B reduced protease activity with APP resulting in reduced amyloid-beta 40 levels but no relevant changes in amyloid-beta 42/amyloid-beta 40 ratio. A->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:24582897,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs1555355869,PMID:24582897,PMID:27930341 P49768 UniProtKB Natural variant 278 278 . . . ID=VAR_081252;Note=In AD3%3B atypical phenotype presenting as language impairment%2C impaired frontal executive function and relative preservation of memory%3B severe decrease of APP and Notch proteolysis. R->I;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:15534260,ECO:0000269|PubMed:23843529;Dbxref=dbSNP:rs63749891,PMID:15534260,PMID:23843529 P49768 UniProtKB Natural variant 278 278 . . . ID=VAR_006449;Note=In AD3. R->T;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9172170;Dbxref=dbSNP:rs63749891,PMID:9172170 P49768 UniProtKB Natural variant 280 280 . . . ID=VAR_006450;Note=In AD3%3B strong deposition of amyloid-beta 42 is observed in brain regions of AD3 patients%3B decreased protease activity with APP resulting in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio%3B decreased activity for Notch1 cleavage. E->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11568920,ECO:0000269|PubMed:22461631,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:28269784,ECO:0000269|PubMed:7550356,ECO:0000269|PubMed:8837617,ECO:0000269|PubMed:9298817;Dbxref=dbSNP:rs63750231,PMID:11568920,PMID:22461631,PMID:27930341,PMID:28269784,PMID:7550356,PMID:8837617,PMID:9298817 P49768 UniProtKB Natural variant 280 280 . . . ID=VAR_006451;Note=In AD3%3B some AD3 patients manifest spastic paraparesis and unusual amyloid plaques with prominent amyloid angiopathy on brain biopsy%3B decreased protease activity with APP%3B increased amyloid-beta 42/amyloid-beta 40 ratio%3B impaired ability to cleave Ephb2/CTF1. E->G;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12370477,ECO:0000269|PubMed:17428795,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7550356;Dbxref=dbSNP:rs63750231,PMID:12370477,PMID:17428795,PMID:27930341,PMID:7550356 P49768 UniProtKB Natural variant 282 282 . . . ID=VAR_009212;Note=In AD3%3B abolishes protease activity with APP. L->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10533070,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750050,PMID:10533070,PMID:27930341 P49768 UniProtKB Natural variant 282 282 . . . ID=VAR_081253;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11701593,ECO:0000269|PubMed:15122701,ECO:0000269|PubMed:16752394;Dbxref=dbSNP:rs63749937,PMID:11701593,PMID:15122701,PMID:16752394 P49768 UniProtKB Natural variant 285 285 . . . ID=VAR_006452;Note=In AD3%3B slightly decreased protease activity with APP and slightly decreased amyloid-beta 42/amyloid-beta 40 ratio. A->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7651536;Dbxref=dbSNP:rs63751139,PMID:27930341,PMID:7651536 P49768 UniProtKB Natural variant 286 286 . . . ID=VAR_006453;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7596406;Dbxref=dbSNP:rs63751235,PMID:27930341,PMID:7596406 P49768 UniProtKB Natural variant 289 289 . . . ID=VAR_010127;Note=In AD3. S->C P49768 UniProtKB Natural variant 311 311 . . . ID=VAR_081254;Note=Found in patients with late-onset Alzheimer disease%3B uncertain significance%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. K->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28269784;Dbxref=dbSNP:rs115865530,PMID:28269784 P49768 UniProtKB Natural variant 315 315 . . . ID=VAR_064747;Note=Found in a renal cell carcinoma sample%3B somatic mutation. Y->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:21248752;Dbxref=PMID:21248752 P49768 UniProtKB Natural variant 318 318 . . . ID=VAR_006454;Note=E->G;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:10533070,ECO:0000269|PubMed:10631141,ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:11568920,ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:18485326,ECO:0000269|PubMed:9384602,ECO:0000269|PubMed:9851443,ECO:0000269|PubMed:9851450,ECO:0000269|PubMed:9915968;Dbxref=dbSNP:rs17125721,PMID:10441572,PMID:10533070,PMID:10631141,PMID:11524469,PMID:11568920,PMID:12552037,PMID:18485326,PMID:9384602,PMID:9851443,PMID:9851450,PMID:9915968 P49768 UniProtKB Natural variant 333 333 . . . ID=VAR_064902;Note=In CMD1U%3B results in slightly decreased protease activity with APP and slightly decreased amyloid-beta 42/amyloid-beta 40 ratio. D->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:17186461,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs121917809,PMID:17186461,PMID:27930341 P49768 UniProtKB Natural variant 352 352 . . . ID=VAR_075272;Note=In AD3%3B uncertain significance. R->RR;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11524469;Dbxref=PMID:11524469 P49768 UniProtKB Natural variant 354 354 . . . ID=VAR_075273;Note=In AD3%3B uncertain significance%3B results in decreased protease activity with APP and decreased amyloid-beta 42/amyloid-beta 40 ratio. T->I;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751164,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 358 358 . . . ID=VAR_075274;Note=In AD3%3B uncertain significance%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. R->Q;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751174,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 365 365 . . . ID=VAR_075275;Note=In AD3%3B uncertain significance. S->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:11524469;Dbxref=dbSNP:rs63750941,PMID:11524469 P49768 UniProtKB Natural variant 377 377 . . . ID=VAR_081255;Note=In AD3%3B uncertain significance. R->M;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12552037;Dbxref=PMID:12552037 P49768 UniProtKB Natural variant 378 378 . . . ID=VAR_006455;Note=In AD3%3B decreased protease activity with APP%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. G->E;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10200054,ECO:0000269|PubMed:27930341;Dbxref=PMID:10200054,PMID:27930341 P49768 UniProtKB Natural variant 378 378 . . . ID=VAR_081256;Note=In AD3%3B abolishes protease activity with APP. G->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:12552037,ECO:0000269|PubMed:27073747,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750323,PMID:12552037,PMID:27073747,PMID:27930341 P49768 UniProtKB Natural variant 381 381 . . . ID=VAR_081257;Note=In AD3. L->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24121961;Dbxref=dbSNP:rs63750687,PMID:24121961 P49768 UniProtKB Natural variant 381 381 . . . ID=VAR_081258;Note=In AD3%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:19797784,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750687,PMID:19797784,PMID:27930341 P49768 UniProtKB Natural variant 384 384 . . . ID=VAR_006456;Note=In AD3%3B results in reduced APP and Notch proteolysis%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. G->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16752394,ECO:0000269|PubMed:23843529,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634711;Dbxref=dbSNP:rs63750646,PMID:16752394,PMID:23843529,PMID:27930341,PMID:8634711 P49768 UniProtKB Natural variant 390 390 . . . ID=VAR_010128;Note=In AD3%3B abolishes protease activity with APP. S->I;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750883,PMID:10441572,PMID:27930341 P49768 UniProtKB Natural variant 392 392 . . . ID=VAR_006457;Note=In AD3%3B results in reduced APP and Notch proteolysis%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. L->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:23843529,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:7651536,ECO:0000269|PubMed:8634712;Dbxref=dbSNP:rs63751416,PMID:10441572,PMID:23843529,PMID:27930341,PMID:7651536,PMID:8634712 P49768 UniProtKB Natural variant 394 394 . . . ID=VAR_075276;Note=In AD3%3B uncertain significance%3B abolishes protease activity with APP. G->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750929,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 396 396 . . . ID=VAR_070026;Note=In AD3%3B uncertain significance%3B decreased protease activity with APP%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. A->T;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Natural variant 405 405 . . . ID=VAR_010129;Note=In AD3%3B uncertain significance%3B decreased protease activity with APP. N->S;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10644793,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751254,PMID:10644793,PMID:27930341 P49768 UniProtKB Natural variant 408 408 . . . ID=VAR_075277;Note=In AD3. I->T;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26549787;Dbxref=dbSNP:rs906454643,PMID:26549787 P49768 UniProtKB Natural variant 409 409 . . . ID=VAR_009213;Note=In AD3%3B uncertain significance%3B decreased protease activity with APP. A->T;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10533070,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750227,PMID:10533070,PMID:27930341 P49768 UniProtKB Natural variant 410 410 . . . ID=VAR_006458;Note=In AD3%3B results in reduced APP and Notch proteolysis. C->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10441572,ECO:0000269|PubMed:23843529,ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:8634712,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs661,PMID:10441572,PMID:23843529,PMID:27930341,PMID:8634712,PMID:9521423 P49768 UniProtKB Natural variant 417 417 . . . ID=VAR_081259;Note=In AD3%3B uncertain significance. G->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30180983;Dbxref=PMID:30180983 P49768 UniProtKB Natural variant 418 418 . . . ID=VAR_075278;Note=In AD3%3B uncertain significance%3B nearly abolishes protease activity with APP. L->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63751316,PMID:11524469,PMID:27930341 P49768 UniProtKB Natural variant 426 426 . . . ID=VAR_006459;Note=In AD3%3B uncertain significance%3B slightly decreased protease activity with APP. A->P;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:27930341,ECO:0000269|PubMed:9521423;Dbxref=dbSNP:rs63751223,PMID:27930341,PMID:9521423 P49768 UniProtKB Natural variant 431 431 . . . ID=VAR_025605;Note=In AD3%3B decreased protease activity with APP%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. A->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:16628450,ECO:0000269|PubMed:16897084,ECO:0000269|PubMed:27930341,ECO:0000269|Ref.93;Dbxref=dbSNP:rs63750083,PMID:11524469,PMID:16628450,PMID:16897084,PMID:27930341 P49768 UniProtKB Natural variant 435 435 . . . ID=VAR_075280;Note=In AD3%3B with unusual amyloid cotton wool plaques%3B almost abolishes gamma-secretase activity%3B no endoproteolytic cleavage%3B no APP nor NOTCH1 processing%3B no detectable amyloid-beta. L->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:16305624,ECO:0000269|PubMed:20460383,ECO:0000269|PubMed:23843529,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750001,PMID:11524469,PMID:16305624,PMID:20460383,PMID:23843529,PMID:27930341 P49768 UniProtKB Natural variant 436 436 . . . ID=VAR_006460;Note=In AD3%3B severe decrease of protease activity with APP. P->Q;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:22529981,ECO:0000269|PubMed:9831473;Dbxref=dbSNP:rs121917808,PMID:22529981,PMID:9831473 P49768 UniProtKB Natural variant 436 436 . . . ID=VAR_008141;Note=In AD3%3B partially abolishes gamma-secretase activity%3B results in altered amyloid-beta production and increased amyloid-beta 42/amyloid-beta 40 ratio. P->S;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10090481,ECO:0000269|PubMed:21248752,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63749925,PMID:10090481,PMID:21248752,PMID:27930341 P49768 UniProtKB Natural variant 439 439 . . . ID=VAR_075282;Note=In AD3%3B uncertain significance%3B no significant change of protease activity with APP. I->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11524469,ECO:0000269|PubMed:27930341;Dbxref=dbSNP:rs63750249,PMID:11524469,PMID:27930341 P49768 UniProtKB Mutagenesis 66 72 . . . Note=No effect on interaction with GFAP. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12058025;Dbxref=PMID:12058025 P49768 UniProtKB Mutagenesis 76 77 . . . Note=No effect on interaction with GFAP. KY->AA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12058025;Dbxref=PMID:12058025 P49768 UniProtKB Mutagenesis 82 83 . . . Note=Loss of interaction with GFAP. VI->EE;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12058025;Dbxref=PMID:12058025 P49768 UniProtKB Mutagenesis 82 82 . . . Note=Loss of interaction with GFAP. V->K%2CE;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12058025;Dbxref=PMID:12058025 P49768 UniProtKB Mutagenesis 84 85 . . . Note=Loss of interaction with GFAP. ML->EE;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12058025;Dbxref=PMID:12058025 P49768 UniProtKB Mutagenesis 99 99 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. T->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 105 105 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. F->I;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 108 108 . . . Note=Nearly abolishes protease activity with APP. R->Q;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 112 112 . . . Note=Formation of an artifactual disulfide bond with a substrate protein. Q->C;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30598546,ECO:0000269|PubMed:30630874;Dbxref=PMID:30598546,PMID:30630874 P49768 UniProtKB Mutagenesis 113 113 . . . Note=Severe decrease of protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. L->Q;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 117 117 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. P->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 123 123 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. E->K;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 131 131 . . . Note=Severe decrease of protease activity with APP. H->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 136 136 . . . Note=Decreased protease activity with APP. A->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 143 143 . . . Note=Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. I->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 150 150 . . . Note=Nearly abolishes protease activity with APP. L->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 165 165 . . . Note=Decreased protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. W->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 168 168 . . . Note=Nearly abolishes protease activity with APP. I->T;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 176 176 . . . Note=Nearly abolishes protease activity with APP. F->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 184 184 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. E->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 202 202 . . . Note=Nearly abolishes protease activity with APP. I->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=PMID:26280335,PMID:27930341 P49768 UniProtKB Mutagenesis 212 212 . . . Note=Nearly abolishes protease activity with APP. S->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 214 214 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. H->D;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 219 219 . . . Note=Decreased protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. L->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 223 223 . . . Note=Abolishes protease activity with APP. Q->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 226 226 . . . Note=Increases protease activity with APP. L->F;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=PMID:26280335,PMID:27930341 P49768 UniProtKB Mutagenesis 230 230 . . . Note=Abolishes protease activity with APP. S->I;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 238 238 . . . Note=Abolishes protease activity with APP. I->M;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 239 239 . . . Note=Abolishes protease activity with APP. K->N;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 245 245 . . . Note=Abolishes protease activity with APP. T->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 248 248 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. L->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=PMID:26280335,PMID:27930341 P49768 UniProtKB Mutagenesis 256 256 . . . Note=Alters gamma-secretase cleavage specificity. Increased production of amyloid-beta protein 42. No effect on enzymatic activity. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:15341515;Dbxref=PMID:15341515 P49768 UniProtKB Mutagenesis 256 256 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. Y->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 257 257 . . . Note=Impaired ability to cleave Ephb2/CTF1. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17428795;Dbxref=PMID:17428795 P49768 UniProtKB Mutagenesis 257 257 . . . Note=Loss of endoproteolytic cleavage. Severe decrease of protease activity with APP. Reduces production of amyloid-beta. Reduces production of NICD in NOTCH1 processing. D->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10206644,ECO:0000269|PubMed:10899933,ECO:0000269|PubMed:15341515,ECO:0000269|PubMed:22529981;Dbxref=PMID:10206644,PMID:10899933,PMID:15341515,PMID:22529981 P49768 UniProtKB Mutagenesis 257 257 . . . Note=Abolishes gamma-secretase activity. Reduces production of amyloid-beta in APP processing. Accumulation of full-length PS1. Loss of binding of transition state analog gamma-secretase inhibitor. D->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10206644,ECO:0000269|PubMed:10899933,ECO:0000269|PubMed:15341515;Dbxref=PMID:10206644,PMID:10899933,PMID:15341515 P49768 UniProtKB Mutagenesis 272 272 . . . Note=Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. V->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 273 273 . . . Note=Decreased protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. E->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 278 278 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. R->K;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 284 284 . . . Note=No significant change of protease activity with APP. P->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 286 286 . . . Note=Increases production of amyloid-beta in APP processing. L->A%2CE%2CP%2CQ%2CR%2CW;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10811883;Dbxref=PMID:10811883 P49768 UniProtKB Mutagenesis 286 286 . . . Note=Reduces production of NICD in NOTCH1 processing. L->E%2CR;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10811883;Dbxref=PMID:10811883 P49768 UniProtKB Mutagenesis 288 290 . . . Note=Loss of NOTCH1 and APPC83 cleavage. Missing;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30598546,ECO:0000269|PubMed:30630874;Dbxref=PMID:30598546,PMID:30630874 P49768 UniProtKB Mutagenesis 291 291 . . . Note=Abolishes protease activity with APP. T->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 292 292 . . . Note=Loss of endoproteolytic cleavage. M->D;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10545183;Dbxref=PMID:10545183 P49768 UniProtKB Mutagenesis 310 310 . . . Note=Abolishes PKA-mediated phosphorylation%3B no effect on caspase-mediated cleavage. S->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:14576165;Dbxref=PMID:14576165 P49768 UniProtKB Mutagenesis 345 345 . . . Note=Abolishes caspase cleavage. D->N;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9485372;Dbxref=PMID:9485372 P49768 UniProtKB Mutagenesis 346 346 . . . Note=Abolishes PKC-mediated phosphorylation%3B no effect on PKA-mediated phosphorylation. S->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:14576165;Dbxref=PMID:14576165 P49768 UniProtKB Mutagenesis 346 346 . . . Note=Inhibits caspase-mediated cleavage. Modulates progression of apoptosis. S->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:14576165;Dbxref=PMID:14576165 P49768 UniProtKB Mutagenesis 352 352 . . . Note=Decreased protease activity with APP. R->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 365 365 . . . Note=Slightly increased protease activity with APP. S->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 373 373 . . . Note=No effect on caspase cleavage. D->N;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9485372;Dbxref=PMID:9485372 P49768 UniProtKB Mutagenesis 377 381 . . . Note=Loss of NOTCH1 and APPC83 cleavage. Missing;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30598546,ECO:0000269|PubMed:30630874;Dbxref=PMID:30598546,PMID:30630874 P49768 UniProtKB Mutagenesis 377 377 . . . Note=Nearly abolishes protease activity with APP. R->W;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 385 385 . . . Note=Loss of endoproteolytic cleavage. Severe decrease of protease activity with APP. Reduces production of amyloid-beta. Loss of NOTCH1 cleavage. Disassembly of the N-cadherin/PS1 complex at the cell surface. Impairs CDH2 processing. D->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10206644,ECO:0000269|PubMed:10899933,ECO:0000269|PubMed:14515347,ECO:0000269|PubMed:15341515,ECO:0000269|PubMed:22529981,ECO:0000269|PubMed:30598546,ECO:0000269|PubMed:30630874,ECO:0000269|PubMed:9485372;Dbxref=PMID:10206644,PMID:10899933,PMID:14515347,PMID:15341515,PMID:22529981,PMID:30598546,PMID:30630874,PMID:9485372 P49768 UniProtKB Mutagenesis 385 385 . . . Note=Abolishes gamma-secretase activity. Reduces production of amyloid-beta in APP processing. Accumulation of full-length PS1. Loss of binding of transition state analog gamma-secretase inhibitor. D->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10206644,ECO:0000269|PubMed:10899933,ECO:0000269|PubMed:14515347,ECO:0000269|PubMed:15341515,ECO:0000269|PubMed:9485372;Dbxref=PMID:10206644,PMID:10899933,PMID:14515347,PMID:15341515,PMID:9485372 P49768 UniProtKB Mutagenesis 385 385 . . . Note=No effect on caspase cleavage. D->N;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10206644,ECO:0000269|PubMed:10899933,ECO:0000269|PubMed:14515347,ECO:0000269|PubMed:15341515,ECO:0000269|PubMed:9485372;Dbxref=PMID:10206644,PMID:10899933,PMID:14515347,PMID:15341515,PMID:9485372 P49768 UniProtKB Mutagenesis 386 386 . . . Note=Nearly abolishes protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. F->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 389 389 . . . Note=Alters gamma-secretase cleavage specificity. Increased production of amyloid-beta protein 42. No effect on enzymatic activity. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:15341515;Dbxref=PMID:15341515 P49768 UniProtKB Mutagenesis 391 391 . . . Note=Decreased protease activity with APP. V->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 412 412 . . . Note=Abolishes protease activity with APP. V->I;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 420 420 . . . Note=Decreased protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. L->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Mutagenesis 424 424 . . . Note=Increases protease activity with APP. L->V;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:26280335,ECO:0000269|PubMed:27930341;Dbxref=PMID:26280335,PMID:27930341 P49768 UniProtKB Mutagenesis 432 434 . . . Note=Loss of NOTCH1 and APPC83 cleavage. Missing;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30598546,ECO:0000269|PubMed:30630874;Dbxref=PMID:30598546,PMID:30630874 P49768 UniProtKB Mutagenesis 432 432 . . . Note=Loss of NOTCH1 and APPC83 cleavage. L->P;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30598546,ECO:0000269|PubMed:30630874;Dbxref=PMID:30598546,PMID:30630874 P49768 UniProtKB Mutagenesis 433 433 . . . Note=No effect on endoproteolytic cleavage. No effect on APP nor NOTCH1 processing. Slightly increased amyloid-beta protein 42/40 ratio. P->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 433 433 . . . Note=No endoproteolytic cleavage%3B no APP%2C nor NOTCH1 processing. No detectable amyloid-beta. P->D%2CF%2CL%2CN%2CV;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16305624,ECO:0000269|PubMed:20460383;Dbxref=PMID:16305624,PMID:20460383 P49768 UniProtKB Mutagenesis 433 433 . . . Note=Very little endoproteolysis. Little APP processing. No NOTCH1 processing. Very low levels amyloid-beta protein 40 and no detectable amyloid-beta protein 42. P->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 434 434 . . . Note=Some loss of endoproteolytic cleavage. Some loss of APP and NOTCH1 processing. 6 to 13-fold increase in amyloid-beta protein 42/40 ratio. A->C;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16305624,ECO:0000269|PubMed:27930341;Dbxref=PMID:16305624,PMID:27930341 P49768 UniProtKB Mutagenesis 434 434 . . . Note=No endoproteolytic cleavage. No APP nor NOTCH1 processing. No detectable amyloid-beta. A->D%2CI%2CL%2CV;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 434 434 . . . Note=No effect on endoproteolytic cleavage. No effect on APP nor NOTCH1 processing. Reduced amyloid-beta protein 42/40 ratio. A->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 435 435 . . . Note=No effect on endoproteolytic cleavage. No effect on APP processing. Impaired NOTCH1 processing. Greatly reduced amyloid-beta protein 42/40 ratio. L->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 435 435 . . . Note=Greatly reduced endoproteolytic cleavage. Very little APP and NOTCH1 processing. Very low levels of amyloid-beta protein 40 and no detectable amyloid-beta protein 42. L->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 435 435 . . . Note=No effect on endoproteolytic cleavage. No effect on APP nor NOTCH1 processing. L->I;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 435 435 . . . Note=No endoproteolytic cleavage%3B no APP%2C nor NOTCH1 processing. No detectable amyloid-beta. L->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20460383;Dbxref=PMID:20460383 P49768 UniProtKB Mutagenesis 435 435 . . . Note=No effect on endoproteolytic cleavage. No effect on APP processing. Impaired NOTCH1 processing. Some increase in amyloid-beta protein 42/40 ratio. L->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16305624;Dbxref=PMID:16305624 P49768 UniProtKB Mutagenesis 437 437 . . . Note=Decreased protease activity with APP. Increased amyloid-beta 42/amyloid-beta 40 ratio in vitro. I->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:27930341;Dbxref=PMID:27930341 P49768 UniProtKB Sequence conflict 128 128 . . . Note=R->G;Ontology_term=ECO:0000305;evidence=ECO:0000305 P49768 UniProtKB Helix 74 102 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 105 107 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Beta strand 114 116 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6LQG P49768 UniProtKB Beta strand 120 123 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 125 155 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 159 175 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 177 188 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 195 214 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 219 239 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 243 262 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Beta strand 263 266 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IDF P49768 UniProtKB Helix 269 277 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Beta strand 278 280 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IDF P49768 UniProtKB Beta strand 284 289 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 293 299 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:2KR6 P49768 UniProtKB Beta strand 341 345 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:2KR6 P49768 UniProtKB Helix 356 368 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:2KR6 P49768 UniProtKB Beta strand 378 382 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 383 398 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Beta strand 401 404 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 405 428 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Beta strand 432 435 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 438 449 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Turn 450 452 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC P49768 UniProtKB Helix 453 463 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6IYC