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P49726 (SPE1_SOLLC) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Arginine decarboxylase

Short name=ADC
Short name=ARGDC
EC=4.1.1.19
OrganismSolanum lycopersicum (Tomato) (Lycopersicon esculentum) [Reference proteome]
Taxonomic identifier4081 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

Protein attributes

Sequence length502 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

L-arginine = agmatine + CO2.

Cofactor

Pyridoxal phosphate.

Magnesium.

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1.

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 502502Arginine decarboxylase
PRO_0000149951

Regions

Region226 – 23611Substrate-binding By similarity

Amino acid modifications

Modified residue421N6-(pyridoxal phosphate)lysine By similarity

Sequences

Sequence LengthMass (Da)Tools
P49726 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 628D32D4560E9A1F

FASTA50254,581
        10         20         30         40         50         60 
MPLVVRFPDV LKNRLETLQS AFDMAINSQG YEAHYQGVYP VKCNQDRFVV EDIVKFGSPY 

        70         80         90        100        110        120 
RFGLEAGSKP ELLLAMNCLS KGSADALLVC NGFKDTEYIS LALVARKLLL NSVIVLEQEE 

       130        140        150        160        170        180 
ELDLVIDISR KMSVRPVIGL RAKLRTKHSG HFGSTSGEKG KFGLTTTQIL RVVKKLDESG 

       190        200        210        220        230        240 
MLDCLQLLHF HIGSQIPTTE LLADGVGEAT QIYSELVRLG AGMKFIDIGG GLGIDYDGSK 

       250        260        270        280        290        300 
SSNSDVSVCY SIEEYASAVV QAVLYVCDRK GGKHPVICSE SGRAIVSHHS ILIFEAVSAS 

       310        320        330        340        350        360 
TSHVSTQPSS GGLQSLVETL NEDARADYRN LSAAAVRGEY DTCLIYSDQL KQRCVEQFKD 

       370        380        390        400        410        420 
GSLDIEQLAA VDSICDWVSK AIGVADPVRT YHVNLSVFTS IPDFWGFSQL FPIVPIHRLD 

       430        440        450        460        470        480 
EKPTMRGILS DLTCDSDGKV DKFIGGESSL PLHEIGSGDG GRYYLGMFLG GAYEEALGGL 

       490        500 
HNLFGGPSVV RVMQSDSPHS FA 

« Hide

References

[1]"Cloning of tomato (Lycopersicon esculentum Mill.) arginine decarboxylase gene and its expression during fruit ripening."
Rastogi R., Dulson J., Rothstein S.J.
Plant Physiol. 103:829-834(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: Pericarp.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L16582 mRNA. Translation: AAA61347.1.
PIRJQ2341.
RefSeqNP_001234649.1. NM_001247720.1.
UniGeneLes.19532.

3D structure databases

ProteinModelPortalP49726.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID543960.
KEGGsly:543960.

Phylogenomic databases

KOK01583.

Enzyme and pathway databases

BioCycMetaCyc:MONOMER-14985.
UniPathwayUPA00186; UER00284.

Family and domain databases

Gene3D2.40.37.10. 2 hits.
3.20.20.10. 1 hit.
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR01273. speA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSPE1_SOLLC
AccessionPrimary (citable) accession number: P49726
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: July 9, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways