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P49726

- SPE1_SOLLC

UniProt

P49726 - SPE1_SOLLC

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Protein
Arginine decarboxylase
Gene
N/A
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

L-arginine = agmatine + CO2.

Cofactori

Pyridoxal phosphate.
Magnesium.

Pathwayi

GO - Molecular functioni

  1. arginine decarboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. arginine catabolic process Source: InterPro
  2. putrescine biosynthetic process Source: UniProtKB-KW
  3. response to abscisic acid Source: EnsemblPlants/Gramene
  4. response to cold Source: EnsemblPlants/Gramene
  5. response to jasmonic acid Source: EnsemblPlants/Gramene
  6. response to karrikin Source: EnsemblPlants/Gramene
  7. response to oxidative stress Source: EnsemblPlants/Gramene
  8. response to salt stress Source: EnsemblPlants/Gramene
  9. response to wounding Source: EnsemblPlants/Gramene
  10. seed development Source: EnsemblPlants/Gramene
  11. spermidine biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Decarboxylase, Lyase

Keywords - Biological processi

Putrescine biosynthesis, Spermidine biosynthesis

Keywords - Ligandi

Magnesium, Pyridoxal phosphate

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-14985.
UniPathwayiUPA00186; UER00284.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine decarboxylase (EC:4.1.1.19)
Short name:
ADC
Short name:
ARGDC
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 502502Arginine decarboxylase
PRO_0000149951Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei42 – 421N6-(pyridoxal phosphate)lysine By similarity

Structurei

3D structure databases

ProteinModelPortaliP49726.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni226 – 23611Substrate-binding By similarity
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

KOiK01583.

Family and domain databases

Gene3Di2.40.37.10. 2 hits.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSiPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR01273. speA. 1 hit.
PROSITEiPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P49726-1 [UniParc]FASTAAdd to Basket

« Hide

MPLVVRFPDV LKNRLETLQS AFDMAINSQG YEAHYQGVYP VKCNQDRFVV    50
EDIVKFGSPY RFGLEAGSKP ELLLAMNCLS KGSADALLVC NGFKDTEYIS 100
LALVARKLLL NSVIVLEQEE ELDLVIDISR KMSVRPVIGL RAKLRTKHSG 150
HFGSTSGEKG KFGLTTTQIL RVVKKLDESG MLDCLQLLHF HIGSQIPTTE 200
LLADGVGEAT QIYSELVRLG AGMKFIDIGG GLGIDYDGSK SSNSDVSVCY 250
SIEEYASAVV QAVLYVCDRK GGKHPVICSE SGRAIVSHHS ILIFEAVSAS 300
TSHVSTQPSS GGLQSLVETL NEDARADYRN LSAAAVRGEY DTCLIYSDQL 350
KQRCVEQFKD GSLDIEQLAA VDSICDWVSK AIGVADPVRT YHVNLSVFTS 400
IPDFWGFSQL FPIVPIHRLD EKPTMRGILS DLTCDSDGKV DKFIGGESSL 450
PLHEIGSGDG GRYYLGMFLG GAYEEALGGL HNLFGGPSVV RVMQSDSPHS 500
FA 502
Length:502
Mass (Da):54,581
Last modified:October 1, 1996 - v1
Checksum:i628D32D4560E9A1F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L16582 mRNA. Translation: AAA61347.1.
PIRiJQ2341.
RefSeqiNP_001234649.1. NM_001247720.1.
UniGeneiLes.19532.

Genome annotation databases

GeneIDi543960.
KEGGisly:543960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L16582 mRNA. Translation: AAA61347.1 .
PIRi JQ2341.
RefSeqi NP_001234649.1. NM_001247720.1.
UniGenei Les.19532.

3D structure databases

ProteinModelPortali P49726.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 543960.
KEGGi sly:543960.

Phylogenomic databases

KOi K01583.

Enzyme and pathway databases

UniPathwayi UPA00186 ; UER00284 .
BioCyci MetaCyc:MONOMER-14985.

Family and domain databases

Gene3Di 2.40.37.10. 2 hits.
3.20.20.10. 1 hit.
InterProi IPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view ]
PRINTSi PR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR01273. speA. 1 hit.
PROSITEi PS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning of tomato (Lycopersicon esculentum Mill.) arginine decarboxylase gene and its expression during fruit ripening."
    Rastogi R., Dulson J., Rothstein S.J.
    Plant Physiol. 103:829-834(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Pericarp.

Entry informationi

Entry nameiSPE1_SOLLC
AccessioniPrimary (citable) accession number: P49726
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: July 9, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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