Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P49726

- SPE1_SOLLC

UniProt

P49726 - SPE1_SOLLC

Protein

Arginine decarboxylase

Gene
N/A
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 80 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    L-arginine = agmatine + CO2.

    Cofactori

    Pyridoxal phosphate.
    Magnesium.

    Pathwayi

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginine catabolic process Source: InterPro
    2. putrescine biosynthetic process Source: UniProtKB-KW
    3. response to abscisic acid Source: EnsemblPlants/Gramene
    4. response to cold Source: EnsemblPlants/Gramene
    5. response to jasmonic acid Source: EnsemblPlants/Gramene
    6. response to karrikin Source: EnsemblPlants/Gramene
    7. response to oxidative stress Source: EnsemblPlants/Gramene
    8. response to salt stress Source: EnsemblPlants/Gramene
    9. response to wounding Source: EnsemblPlants/Gramene
    10. seed development Source: EnsemblPlants/Gramene
    11. spermidine biosynthetic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Biological processi

    Putrescine biosynthesis, Spermidine biosynthesis

    Keywords - Ligandi

    Magnesium, Pyridoxal phosphate

    Enzyme and pathway databases

    BioCyciMetaCyc:MONOMER-14985.
    UniPathwayiUPA00186; UER00284.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine decarboxylase (EC:4.1.1.19)
    Short name:
    ADC
    Short name:
    ARGDC
    OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
    Taxonomic identifieri4081 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
    ProteomesiUP000004994: Unplaced

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 502502Arginine decarboxylasePRO_0000149951Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei42 – 421N6-(pyridoxal phosphate)lysineBy similarity

    Structurei

    3D structure databases

    ProteinModelPortaliP49726.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni226 – 23611Substrate-bindingBy similarityAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    KOiK01583.

    Family and domain databases

    Gene3Di2.40.37.10. 2 hits.
    3.20.20.10. 1 hit.
    InterProiIPR009006. Ala_racemase/Decarboxylase_C.
    IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view]
    PRINTSiPR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsiTIGR01273. speA. 1 hit.
    PROSITEiPS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P49726-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPLVVRFPDV LKNRLETLQS AFDMAINSQG YEAHYQGVYP VKCNQDRFVV    50
    EDIVKFGSPY RFGLEAGSKP ELLLAMNCLS KGSADALLVC NGFKDTEYIS 100
    LALVARKLLL NSVIVLEQEE ELDLVIDISR KMSVRPVIGL RAKLRTKHSG 150
    HFGSTSGEKG KFGLTTTQIL RVVKKLDESG MLDCLQLLHF HIGSQIPTTE 200
    LLADGVGEAT QIYSELVRLG AGMKFIDIGG GLGIDYDGSK SSNSDVSVCY 250
    SIEEYASAVV QAVLYVCDRK GGKHPVICSE SGRAIVSHHS ILIFEAVSAS 300
    TSHVSTQPSS GGLQSLVETL NEDARADYRN LSAAAVRGEY DTCLIYSDQL 350
    KQRCVEQFKD GSLDIEQLAA VDSICDWVSK AIGVADPVRT YHVNLSVFTS 400
    IPDFWGFSQL FPIVPIHRLD EKPTMRGILS DLTCDSDGKV DKFIGGESSL 450
    PLHEIGSGDG GRYYLGMFLG GAYEEALGGL HNLFGGPSVV RVMQSDSPHS 500
    FA 502
    Length:502
    Mass (Da):54,581
    Last modified:October 1, 1996 - v1
    Checksum:i628D32D4560E9A1F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L16582 mRNA. Translation: AAA61347.1.
    PIRiJQ2341.
    RefSeqiNP_001234649.1. NM_001247720.1.
    UniGeneiLes.19532.

    Genome annotation databases

    GeneIDi543960.
    KEGGisly:543960.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L16582 mRNA. Translation: AAA61347.1 .
    PIRi JQ2341.
    RefSeqi NP_001234649.1. NM_001247720.1.
    UniGenei Les.19532.

    3D structure databases

    ProteinModelPortali P49726.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 543960.
    KEGGi sly:543960.

    Phylogenomic databases

    KOi K01583.

    Enzyme and pathway databases

    UniPathwayi UPA00186 ; UER00284 .
    BioCyci MetaCyc:MONOMER-14985.

    Family and domain databases

    Gene3Di 2.40.37.10. 2 hits.
    3.20.20.10. 1 hit.
    InterProi IPR009006. Ala_racemase/Decarboxylase_C.
    IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view ]
    PRINTSi PR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsi TIGR01273. speA. 1 hit.
    PROSITEi PS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning of tomato (Lycopersicon esculentum Mill.) arginine decarboxylase gene and its expression during fruit ripening."
      Rastogi R., Dulson J., Rothstein S.J.
      Plant Physiol. 103:829-834(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Tissue: Pericarp.

    Entry informationi

    Entry nameiSPE1_SOLLC
    AccessioniPrimary (citable) accession number: P49726
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3