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Protein

60S ribosomal protein L19-3

Gene

RPL19C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19-3
Gene namesi
Name:RPL19C
Ordered Locus Names:At4g02230
ORF Names:T2H3.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G02230
TAIRilocus:2137854 AT4G02230

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001311811 – 20860S ribosomal protein L19-3Add BLAST208

Proteomic databases

PaxDbiP49693
PRIDEiP49693

PTM databases

iPTMnetiP49693

Expressioni

Gene expression databases

ExpressionAtlasiP49693 baseline and differential
GenevisibleiP49693 AT

Interactioni

Protein-protein interaction databases

BioGridi13389, 1 interactor
STRINGi3702.AT4G02230.1

Structurei

3D structure databases

ProteinModelPortaliP49693
SMRiP49693
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1696 Eukaryota
COG2147 LUCA
HOGENOMiHOG000231277
InParanoidiP49693
KOiK02885
OMAiWIRRMRI
OrthoDBiEOG09360OFN
PhylomeDBiP49693

Family and domain databases

CDDicd01417 Ribosomal_L19e_E, 1 hit
Gene3Di1.10.1650.10, 1 hit
HAMAPiMF_01475 Ribosomal_L19e, 1 hit
InterProiView protein in InterPro
IPR035970 60S_ribosomal_L19/L19e_sf
IPR000196 Ribosomal_L19/L19e
IPR023638 Ribosomal_L19/L19e_CS
IPR015972 Ribosomal_L19/L19e_dom1
IPR033935 Ribosomal_L19_euka
PfamiView protein in Pfam
PF01280 Ribosomal_L19e, 1 hit
SMARTiView protein in SMART
SM01416 Ribosomal_L19e, 1 hit
SUPFAMiSSF48140 SSF48140, 1 hit
PROSITEiView protein in PROSITE
PS00526 RIBOSOMAL_L19E, 1 hit

Sequencei

Sequence statusi: Complete.

P49693-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSLKLQKRL ASSVLKCGKR KVWLDPNEGS DISMANSRQN IRKLVKDGFI
60 70 80 90 100
IRKPTKIHSR SRARQLNIAK RKGRHSGYGK RKGTREARLP TKVLWMRRMR
110 120 130 140 150
VLRRLLKKYR ETKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKSKAEKA
160 170 180 190 200
REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDIP AAAPPAQTAE

VPAKKSKK
Length:208
Mass (Da):24,202
Last modified:December 13, 2001 - v3
Checksum:iFF0D3C023117E5F6
GO

Sequence cautioni

The sequence AAC28170 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti11A → R in CAA79080 (PubMed:8281187).Curated1
Sequence conflicti82 – 85KGTR → NGYP (PubMed:8281187).Curated4

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF075597 Genomic DNA Translation: AAC28170.1 Sequence problems.
AL161494 Genomic DNA Translation: CAB80716.1
CP002687 Genomic DNA Translation: AEE82143.1
AF386993 mRNA Translation: AAK62438.1
AY072494 mRNA Translation: AAL66909.1
Z17981 mRNA Translation: CAA79080.1
PIRiE85028
T01426
RefSeqiNP_192132.1, NM_116456.4
UniGeneiAt.23066

Genome annotation databases

EnsemblPlantsiAT4G02230.1; AT4G02230.1; AT4G02230
GeneIDi828099
GrameneiAT4G02230.1; AT4G02230.1; AT4G02230
KEGGiath:AT4G02230

Similar proteinsi

Entry informationi

Entry nameiRL193_ARATH
AccessioniPrimary (citable) accession number: P49693
Secondary accession number(s): O81422, Q9M114
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: December 13, 2001
Last modified: April 25, 2018
This is version 147 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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