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Protein

40S ribosomal protein S13

Gene

rps13

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S13
Gene namesi
Name:rps13
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-940111. rps13.

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001156682 – 15140S ribosomal protein S13Add BLAST150

Proteomic databases

MaxQBiP49393.
PRIDEiP49393.

Interactioni

Protein-protein interaction databases

IntActiP49393. 1 interactor.

Structurei

3D structure databases

ProteinModelPortaliP49393.
SMRiP49393.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOVERGENiHBG000938.
KOiK02953.

Family and domain databases

CDDicd00353. Ribosomal_S15p_S13e. 1 hit.
Gene3Di1.10.287.10. 1 hit.
HAMAPiMF_01343_A. Ribosomal_S15_A. 1 hit.
InterProiView protein in InterPro
IPR012606. Ribosomal_S13/S15_N.
IPR000589. Ribosomal_S15.
IPR023029. Ribosomal_S15P.
IPR009068. S15_NS1_RNA-bd.
PANTHERiPTHR11885. PTHR11885. 1 hit.
PfamiView protein in Pfam
PF08069. Ribosomal_S13_N. 1 hit.
PF00312. Ribosomal_S15. 1 hit.
SMARTiView protein in SMART
SM01386. Ribosomal_S13_N. 1 hit.
SM01387. Ribosomal_S15. 1 hit.
SUPFAMiSSF47060. SSF47060. 1 hit.
PROSITEiView protein in PROSITE
PS00362. RIBOSOMAL_S15. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P49393-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRMHAPGKG LSQSALPYRR SVPTWLKLTS DDVKEQIYKL AKKGLTPSQI
60 70 80 90 100
GVILRDSHGV AQVRFVTGNK ILRILKSKGL APDLPEDLYH LIKKAVAVRK
110 120 130 140 150
HLERNRKDKD AKFRLILIES RIHRLARYYK TRRVLPPNWK YESSTASALV

A
Length:151
Mass (Da):17,250
Last modified:January 23, 2007 - v2
Checksum:i23F94D2A4F8B8D53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z49897 Genomic DNA. Translation: CAA90077.1.
PIRiS57438.
RefSeqiXP_018115860.1. XM_018260371.1.

Genome annotation databases

GeneIDi108715318.
KEGGixla:108715318.

Similar proteinsi

Entry informationi

Entry nameiRS13_XENLA
AccessioniPrimary (citable) accession number: P49393
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: October 25, 2017
This is version 67 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families