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P49210 (RL9_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S ribosomal protein L9
Gene names
Name:RPL9
Synonyms:YK426
Ordered Locus Names:Os09g0485900, LOC_Os09g31180
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length190 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L6P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 19019060S ribosomal protein L9
PRO_0000131107

Experimental info

Sequence conflict161V → L in BAA19798. Ref.1
Sequence conflict1901A → Q in BAA07209. Ref.4

Sequences

Sequence LengthMass (Da)Tools
P49210 [UniParc].

Last modified June 27, 2006. Version 3.
Checksum: C68605FAF43DA121

FASTA19021,349
        10         20         30         40         50         60 
MKTILASETM EIPEGVTVQV AAKVVTVEGP RGKLTRNFKH LNLDFQLLEG GRKLQVDAWF 

        70         80         90        100        110        120 
GTRRTMAAIR TAISHVQNLI TGVTKGYRYK MRFVYAHFPI NASITNSNTA IEIRNFLGEK 

       130        140        150        160        170        180 
KVRKVDMLEG VTILRSEKVK DELVLDGNDI ELVSRSAALI NQKCHVKNKD IRKFLDGIYV 

       190 
SDKGTITEDA 

« Hide

References

« Hide 'large scale' references
[1]"Characterization of rice gene (Yk426) induced by GA3."
Liu Q., Shoda K., Hara C., Kawai M., Uchimiya H.
Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Hayayuki.
Tissue: Anther.
[2]"A rice ribosomal L9 similar protein was induced by oxidant burst."
Quanhong Y., Rihe P., Aisheng X.
Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[3]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Partial cDNA sequence of ribosomal protein L9 homolog from rice calli exposed to salt stress."
Nakamura I., Kameya N., Aoki T., Tada T., Norita E., Kanzaki H., Uchimiya H.
Submitted (SEP-1995) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 101-190.
Tissue: Callus.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D83527 mRNA. Translation: BAA19798.1.
AY323481 mRNA. Translation: AAP92747.1.
AC108756 Genomic DNA. No translation available.
D38012 mRNA. Translation: BAA07209.1.
PIRT03761.
T04077.
RefSeqNP_001063520.1. NM_001070055.1.
UniGeneOs.9253.

3D structure databases

ProteinModelPortalP49210.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbP49210.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS09T0485900-01; OS09T0485900-01; OS09G0485900.
GeneID4347422.
KEGGosa:4347422.

Organism-specific databases

GrameneP49210.

Phylogenomic databases

eggNOGCOG0097.
HOGENOMHOG000039905.
KOK02940.
OMAISIEIHH.

Family and domain databases

Gene3D3.90.930.12. 2 hits.
InterProIPR000702. Ribosomal_L6.
IPR020040. Ribosomal_L6_a/b-dom.
IPR002359. Ribosomal_L6_CS2.
[Graphical view]
PANTHERPTHR11655. PTHR11655. 1 hit.
PfamPF00347. Ribosomal_L6. 2 hits.
[Graphical view]
PIRSFPIRSF002162. Ribosomal_L6. 1 hit.
SUPFAMSSF56053. SSF56053. 2 hits.
PROSITEPS00700. RIBOSOMAL_L6_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL9_ORYSJ
AccessionPrimary (citable) accession number: P49210
Secondary accession number(s): O04165, Q7XBH6
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: June 27, 2006
Last modified: May 14, 2014
This is version 79 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Ribosomal proteins

Ribosomal proteins families and list of entries