P49206 (RS261_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
40S ribosomal protein S26-1

Gene names

Name:	RPS26A
Ordered Locus Names:	At2g40590
ORF Names:	T2P4.6

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	131 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S26e family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytosolic small ribosomal subunit Inferred from direct assay. Source: TAIR
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 131	131	40S ribosomal protein S26-1		PRO_0000204522
Experimental info
	Sequence conflict	19	1	N → K in CAA79121. Ref.4
	Sequence conflict	85 – 86	2	RV → ES Ref.4

Sequences

	Sequence		Length	Mass (Da)
	P49206 [UniParc]. Last modified July 15, 1998. Version 2. Checksum: 2F219F052DA11E37	FASTA	131	14,729
	10 20 30 40 50 60 MTFKRRNGGR NKHNRGHVNP IRCSNCGKCC PKDKAIKRFI VRNIVEQAAI RDVQEASVYE 70 80 90 100 110 120 GYTLPKLYAK TQYCVSCAIH SHVVRVRSRT NRRVRTPPPR FTRRKEDTPK PGQPGQAPRP 130 AGPGAAAAPR V

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C. Nature 402:761-768(1999) [PubMed: 10617197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arabidopsis thaliana." Hoefte H., Desprez T., Amselem J., Chiapello H., Rouze P., Caboche M., Moisan A., Jourjon M.-F., Charpenteau J.-L., Berthomieu P., Guerrier D., Giraudat J., Quigley F., Thomas F., Yu D.-Y., Mache R., Raynal M., Cooke R. , Grellet F., Delseny M., Parmentier Y., de Marcillac G., Gigot C., Fleck J., Philipps G., Axelos M., Bardet C., Tremousaygue D., Lescure B. Plant J. 4:1051-1061(1993) [PubMed: 8281187] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-86. Strain: cv. Columbia. Tissue: Seedling.
[5]	"The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome." Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R., Delseny M., Bailey-Serres J. Plant Physiol. 127:398-415(2001) [PubMed: 11598216] [Abstract] Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC002336 Genomic DNA. Translation: AAB87578.1. CP002685 Genomic DNA. Translation: AEC09852.1. AY127000 mRNA. Translation: AAM83227.1. BT001026 mRNA. Translation: AAN46780.1. Z18167 mRNA. Translation: CAA79121.1.
IPI	IPI00525445.
PIR	D84831.
RefSeq	NP_181591.1. NM_129621.3.
UniGene	At.48573.
3D structure databases
ProteinModelPortal	P49206.
SMR	P49206. Positions 2-97.
ModBase	Search...
Protein-protein interaction databases
IntAct	P49206. 3 interactions.
STRING	P49206.
Proteomic databases
PRIDE	P49206.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT2G40590.1; AT2G40590.1; AT2G40590.
GeneID	818654.
GenomeReviews	Gene locus AT2G40590 in contig CT485783_GR.
KEGG	ath:AT2G40590.
NMPDR	fig|3702.1.peg.11192.
Organism-specific databases
TAIR	At2g40590.
Phylogenomic databases
eggNOG	KOG1768.
GeneTree	EPGT00050000012511.
HOGENOM	HBG744826.
InParanoid	P49206.
OMA	TIRNMVE.
PhylomeDB	P49206.
ProtClustDB	PLN00186.
Gene expression databases
ArrayExpress	P49206.
Genevestigator	P49206.
GermOnline	AT2G40590. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR000892. Ribosomal_S26e. [Graphical view]
KO	K02976.
PANTHER	PTHR12538. Ribosomal_S26E. 1 hit.
Pfam	PF01283. Ribosomal_S26e. 1 hit. [Graphical view]
PROSITE	PS00733. RIBOSOMAL_S26E. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS261_ARATH

Accession

Primary (citable) accession number: P49206
Secondary accession number(s): O22876

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1996
Last sequence update:	July 15, 1998
Last modified:	December 14, 2011
This is version 78 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program