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Protein

60S ribosomal protein L36

Gene

rpl-36

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36
Gene namesi
Name:rpl-36
ORF Names:F37C12.4
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiF37C12.4; CE30781; WBGene00004450; rpl-36.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001950102 – 10460S ribosomal protein L36Add BLAST103

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP49181.
PaxDbiP49181.
PeptideAtlasiP49181.
PRIDEiP49181.

PTM databases

iPTMnetiP49181.

Expressioni

Gene expression databases

BgeeiWBGene00004450.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
rnf-1O014823EBI-321339,EBI-315611

Protein-protein interaction databases

BioGridi41219. 5 interactors.
IntActiP49181. 1 interactor.
MINTiMINT-1095844.
STRINGi6239.F37C12.4.2.

Structurei

3D structure databases

ProteinModelPortaliP49181.
SMRiP49181.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3452. Eukaryota.
COG5051. LUCA.
GeneTreeiENSGT00390000011943.
HOGENOMiHOG000155312.
InParanoidiP49181.
KOiK02920.
OMAiGTHRRAK.
OrthoDBiEOG091G0YP6.
PhylomeDBiP49181.

Family and domain databases

InterProiView protein in InterPro
IPR000509. Ribosomal_L36e.
PANTHERiPTHR10114. PTHR10114. 1 hit.
PfamiView protein in Pfam
PF01158. Ribosomal_L36e. 1 hit.
PROSITEiView protein in PROSITE
PS01190. RIBOSOMAL_L36E. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P49181-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGPGIEGLA VGLNKGHAAT QLPVKQRQNR HKGVASKKTK IVRELVREIT
60 70 80 90 100
GFAPYERRVL EMLRISKDKR ALKFLKRRIG THRRAKGKRE ELQNVIIAQR

KAHK
Length:104
Mass (Da):11,884
Last modified:January 23, 2007 - v3
Checksum:iB0D731E1032E323D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081316 Genomic DNA. Translation: CCD70737.1.
PIRiT28834.
RefSeqiNP_498573.2. NM_066172.7.
UniGeneiCel.20089.

Genome annotation databases

EnsemblMetazoaiF37C12.4; F37C12.4; WBGene00004450.
GeneIDi176007.
KEGGicel:CELE_F37C12.4.
UCSCiF37C12.4.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiRL36_CAEEL
AccessioniPrimary (citable) accession number: P49181
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: November 22, 2017
This is version 118 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families