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Protein

60S ribosomal protein L35a

Gene

rpl-33

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L35a
Gene namesi
Name:rpl-33
ORF Names:F10E7.7
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF10E7.7; CE04362; WBGene00004447; rpl-33.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001928032 – 12460S ribosomal protein L35aAdd BLAST123

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP49180.
PaxDbiP49180.
PeptideAtlasiP49180.
PRIDEiP49180.

PTM databases

iPTMnetiP49180.

Expressioni

Gene expression databases

BgeeiWBGene00004447.

Interactioni

Protein-protein interaction databases

STRINGi6239.F10E7.7.1.

Structurei

3D structure databases

ProteinModelPortaliP49180.
SMRiP49180.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0887. Eukaryota.
COG2451. LUCA.
GeneTreeiENSGT00390000016972.
HOGENOMiHOG000195636.
InParanoidiP49180.
KOiK02917.
OMAiVRAIWGK.
OrthoDBiEOG091G112U.
PhylomeDBiP49180.

Family and domain databases

HAMAPiMF_00573. Ribosomal_L35Ae. 1 hit.
InterProiView protein in InterPro
IPR001780. Ribosomal_L35A.
IPR018266. Ribosomal_L35Ae_CS.
IPR009000. Transl_B-barrel.
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiView protein in Pfam
PF01247. Ribosomal_L35Ae. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012670. Ribosomal_L35Ae. 1 hit.
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiView protein in PROSITE
PS01105. RIBOSOMAL_L35AE. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P49180-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADTAVARRP SAPTTGRLYV KAIFTGFKRG LRTQSEHTSL LKLEGVFNKE
60 70 80 90 100
DAGFYAGKRV VYLYKAHNKT LKTGHTVATR TRAIWGKITR PHGNAGAVRA
110 120
KFHHNIPPSA LGKRIRVLLY PSNI
Length:124
Mass (Da):13,768
Last modified:January 23, 2007 - v3
Checksum:i775114FFC1FA9871
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081111 Genomic DNA. Translation: CCD69169.1.
PIRiT34207.
RefSeqiNP_495468.1. NM_063067.3.
UniGeneiCel.8345.

Genome annotation databases

EnsemblMetazoaiF10E7.7.1; F10E7.7.1; WBGene00004447.
F10E7.7.2; F10E7.7.2; WBGene00004447.
GeneIDi174166.
KEGGicel:CELE_F10E7.7.
UCSCiF10E7.7.1. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL35A_CAEEL
AccessioniPrimary (citable) accession number: P49180
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: July 5, 2017
This is version 115 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families