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Protein

40S ribosomal protein S26

Gene

RPS26

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26
Gene namesi
Name:RPS26
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Unplaced

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 11511440S ribosomal protein S26PRO_0000204513Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei54 – 541PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP49171.
PeptideAtlasiP49171.
PRIDEiP49171.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000000393.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50Sa1-115[»]
3J7Relectron microscopy3.90Sa1-115[»]
ProteinModelPortaliP49171.
SMRiP49171. Positions 2-97.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S26e family.Curated

Phylogenomic databases

eggNOGiKOG1768. Eukaryota.
COG4830. LUCA.
HOGENOMiHOG000108824.
HOVERGENiHBG079147.
InParanoidiP49171.
KOiK02976.

Family and domain databases

InterProiIPR000892. Ribosomal_S26e.
[Graphical view]
PANTHERiPTHR12538. PTHR12538. 1 hit.
PfamiPF01283. Ribosomal_S26e. 1 hit.
[Graphical view]
PROSITEiPS00733. RIBOSOMAL_S26E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P49171-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKKRRNNGR AKKGRGHVQP IRCTNCARCV PKDKAIKKFV IRNIVEAAAV
60 70 80 90 100
RDISEASVFD AYVLPKLYVK LHYCVSCAIH SKVVRNRSRE ARKDRTPPPR
110
FRPAGAAPRP PPKPM
Length:115
Mass (Da):13,015
Last modified:December 4, 2007 - v4
Checksum:iF60DF98F8900D968
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
F14491 mRNA. Translation: CAA23085.1.
DQ629173 mRNA. Translation: ABK55657.1.
RefSeqiNP_001090950.1. NM_001097481.2.
UniGeneiSsc.945.

Genome annotation databases

GeneIDi100037997.
KEGGissc:100037997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
F14491 mRNA. Translation: CAA23085.1.
DQ629173 mRNA. Translation: ABK55657.1.
RefSeqiNP_001090950.1. NM_001097481.2.
UniGeneiSsc.945.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50Sa1-115[»]
3J7Relectron microscopy3.90Sa1-115[»]
ProteinModelPortaliP49171.
SMRiP49171. Positions 2-97.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000000393.

Proteomic databases

PaxDbiP49171.
PeptideAtlasiP49171.
PRIDEiP49171.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100037997.
KEGGissc:100037997.

Organism-specific databases

CTDi6231.

Phylogenomic databases

eggNOGiKOG1768. Eukaryota.
COG4830. LUCA.
HOGENOMiHOG000108824.
HOVERGENiHBG079147.
InParanoidiP49171.
KOiK02976.

Family and domain databases

InterProiIPR000892. Ribosomal_S26e.
[Graphical view]
PANTHERiPTHR12538. PTHR12538. 1 hit.
PfamiPF01283. Ribosomal_S26e. 1 hit.
[Graphical view]
PROSITEiPS00733. RIBOSOMAL_S26E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Evaluation and characterization of a porcine small intestine cDNA library: analysis of 839 clones."
    Winteroe A.K., Fredholm M., Davies W.
    Mamm. Genome 7:509-517(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Small intestine.
  2. "Generation and analysis of cDNA sequences derived from a porcine skeletal muscle library."
    Cai G., Chen Y., Wang C., Li J., Peng G., Zhang H.
    Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Longissimus dorsi muscle.

Entry informationi

Entry nameiRS26_PIG
AccessioniPrimary (citable) accession number: P49171
Secondary accession number(s): A1XQV1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: December 4, 2007
Last modified: July 6, 2016
This is version 79 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.