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Protein

Ras-related protein Rab-2-B

Gene

RAB2B

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Protein transport. Probably involved in vesicular traffic (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi13 – 21GTPBy similarity9
Nucleotide bindingi61 – 65GTPBy similarity5
Nucleotide bindingi119 – 122GTPBy similarity4
Nucleotide bindingi149 – 151GTPBy similarity3

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein Rab-2-B
Gene namesi
Name:RAB2B
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Chromosome 10

Organism-specific databases

MaizeGDBi121973.

Subcellular locationi

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001210741 – 210Ras-related protein Rab-2-BAdd BLAST210

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi208S-geranylgeranyl cysteineBy similarity1
Lipidationi209S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PaxDbiP49104.
PRIDEiP49104.

Expressioni

Gene expression databases

ExpressionAtlasiP49104. baseline and differential.
GenevisibleiP49104. ZM.

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G173878_P01.

Structurei

3D structure databases

ProteinModelPortaliP49104.
SMRiP49104.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi35 – 43Effector regionBy similarity9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0098. Eukaryota.
COG1100. LUCA.
HOGENOMiHOG000233968.
KOiK07877.
OMAiKIGPQQP.
OrthoDBiEOG09360MD2.

Family and domain databases

InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
PfamiView protein in Pfam
PF00071. Ras. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiView protein in PROSITE
PS51419. RAB. 1 hit.

Sequencei

Sequence statusi: Complete.

P49104-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI
60 70 80 90 100
DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
110 120 130 140 150
LEDARQHANA NMTIMLVGNK CDLSHRRAVS YEEGEQFAKE HGLIFMEASA
160 170 180 190 200
KTAQNVEEAF VKTAGAIYKK IQDGVFDVSN ESYGIKVGYA IPGQSGGAGS
210
SSSQGGGCCS
Length:210
Mass (Da):23,061
Last modified:February 1, 1996 - v1
Checksum:iAD881F3018F28CBF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22433 mRNA. Translation: AAA63902.1.
PIRiT02248.
RefSeqiNP_001106234.1. NM_001112763.1.
UniGeneiZm.31805.

Genome annotation databases

EnsemblPlantsiZm00001d025660_T001; Zm00001d025660_P001; Zm00001d025660.
Zm00001d025660_T002; Zm00001d025660_P002; Zm00001d025660.
GeneIDi100127494.
GrameneiZm00001d025660_T001; Zm00001d025660_P001; Zm00001d025660.
Zm00001d025660_T002; Zm00001d025660_P002; Zm00001d025660.
KEGGizma:100127494.

Similar proteinsi

Entry informationi

Entry nameiRAB2B_MAIZE
AccessioniPrimary (citable) accession number: P49104
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: August 30, 2017
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families