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Protein

Ras-related protein Rab-2-B

Gene

RAB2B

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Protein transport. Probably involved in vesicular traffic (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi13 – 219GTPBy similarity
Nucleotide bindingi61 – 655GTPBy similarity
Nucleotide bindingi119 – 1224GTPBy similarity
Nucleotide bindingi149 – 1513GTPBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Keywords - Ligandi

GTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein Rab-2-B
Gene namesi
Name:RAB2B
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Chromosome 10

Organism-specific databases

MaizeGDBi121973.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 210210Ras-related protein Rab-2-BPRO_0000121074Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi208 – 2081S-geranylgeranyl cysteineBy similarity
Lipidationi209 – 2091S-geranylgeranyl cysteineBy similarity

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PaxDbiP49104.
PRIDEiP49104.

Expressioni

Gene expression databases

ExpressionAtlasiP49104. baseline and differential.
GenevisibleiP49104. ZM.

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G173878_P01.

Structurei

3D structure databases

ProteinModelPortaliP49104.
SMRiP49104. Positions 2-170.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi35 – 439Effector regionBy similarity

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0098. Eukaryota.
COG1100. LUCA.
HOGENOMiHOG000233968.
KOiK07877.
OMAiFTHATEW.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51419. RAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P49104-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI
60 70 80 90 100
DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
110 120 130 140 150
LEDARQHANA NMTIMLVGNK CDLSHRRAVS YEEGEQFAKE HGLIFMEASA
160 170 180 190 200
KTAQNVEEAF VKTAGAIYKK IQDGVFDVSN ESYGIKVGYA IPGQSGGAGS
210
SSSQGGGCCS
Length:210
Mass (Da):23,061
Last modified:February 1, 1996 - v1
Checksum:iAD881F3018F28CBF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22433 mRNA. Translation: AAA63902.1.
PIRiT02248.
RefSeqiNP_001106234.1. NM_001112763.1.
UniGeneiZm.31805.

Genome annotation databases

EnsemblPlantsiGRMZM2G173878_T01; GRMZM2G173878_P01; GRMZM2G173878.
GeneIDi100127494.
GrameneiGRMZM2G173878_T01; GRMZM2G173878_P01; GRMZM2G173878.
KEGGizma:100127494.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22433 mRNA. Translation: AAA63902.1.
PIRiT02248.
RefSeqiNP_001106234.1. NM_001112763.1.
UniGeneiZm.31805.

3D structure databases

ProteinModelPortaliP49104.
SMRiP49104. Positions 2-170.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G173878_P01.

Proteomic databases

PaxDbiP49104.
PRIDEiP49104.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGRMZM2G173878_T01; GRMZM2G173878_P01; GRMZM2G173878.
GeneIDi100127494.
GrameneiGRMZM2G173878_T01; GRMZM2G173878_P01; GRMZM2G173878.
KEGGizma:100127494.

Organism-specific databases

MaizeGDBi121973.

Phylogenomic databases

eggNOGiKOG0098. Eukaryota.
COG1100. LUCA.
HOGENOMiHOG000233968.
KOiK07877.
OMAiFTHATEW.

Gene expression databases

ExpressionAtlasiP49104. baseline and differential.
GenevisibleiP49104. ZM.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51419. RAB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Laughner B.J., Ferl R.J., Almira E.C.
    Submitted (MAR-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Entry informationi

Entry nameiRAB2B_MAIZE
AccessioniPrimary (citable) accession number: P49104
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: June 8, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.