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P49081 (MASY_MAIZE) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Malate synthase, glyoxysomal

EC=2.3.3.9
Gene names
Name:LIP
OrganismZea mays (Maize)
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length559 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA.

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2.

Subcellular location

Glyoxysome.

Sequence similarities

Belongs to the malate synthase family.

Ontologies

Keywords
   Biological processGlyoxylate bypass
Tricarboxylic acid cycle
   Cellular componentGlyoxysome
Peroxisome
   Molecular functionTransferase
Gene Ontology (GO)
   Biological_processglyoxylate cycle

Inferred from electronic annotation. Source: UniProtKB-UniPathway

tricarboxylic acid cycle

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentglyoxysome

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionmalate synthase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 559559Malate synthase, glyoxysomal
PRO_0000166870

Regions

Motif557 – 5593Microbody targeting signal Potential

Sites

Active site1731Proton acceptor By similarity
Active site4591Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
P49081 [UniParc].

Last modified February 1, 1996. Version 1.
Checksum: BC639B38D57C530B

FASTA55961,637
        10         20         30         40         50         60 
MAASTAAPCY DAPEGVDVRG RYDREFAGIL TRDALDFVAG LQREFRGAVR YAMEQRREAQ 

        70         80         90        100        110        120 
RRYDAGELPR FDPATTLVRE GDWTCASVPP AVADRTVEIT GPAEPRKMVI NALNSGAKVF 

       130        140        150        160        170        180 
MADFEDAMSP TWENLMHGQV NLRDAVAGTI SFRDAPRGRT YELNDRTAKL FVRPRGWHLP 

       190        200        210        220        230        240 
EAHILIDGEP AIGCLVDFGL YFFHNHAAFG AGQGAGFGPL CDLPKMEHSR EARIWNGVFQ 

       250        260        270        280        290        300 
RAEKAAGIEP GSIRATVLVE TLPAVFQMNE ILHELREHSA GLNCGRWDYI FSYVKTFRAH 

       310        320        330        340        350        360 
PDRLLPDRAL VGMAQHFMRS YSHLLIHTCH RRGVHAMGGM AAQIPIKDDA AANEAALELV 

       370        380        390        400        410        420 
RKDKLREVRA GHDGTWAAHP GLIPAIREVF EGHLGGRPNQ IGDAAGHEGA SVKEEDLIQP 

       430        440        450        460        470        480 
PRGARTVDGL RLNVRVGVQY LAAWLAGSGS VPLYNLMEDA ATAEISRVQN WQWLRHGAAL 

       490        500        510        520        530        540 
DAGGVEVRAT PELLARVVEE EMARVEAEVG PDRFRKGRYA EAGRIFSRQC TAPELDDFLT 

       550 
LDAYNLIVAH HPGASPCKL 

« Hide

References

[1]"Nucleotide sequence of malate synthase cDNA in maize."
Paek N.C., Taylor B.H., Smith J.D.
Plant Gene Register PGR95-015
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Texas 5855.
Tissue: Scutellum.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L35914 mRNA. Translation: AAB04118.1.
PIRT03412.
RefSeqNP_001105328.1. NM_001111858.1.
UniGeneZm.66722.

3D structure databases

ProteinModelPortalP49081.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEP49081.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID542252.
KEGGzma:542252.

Organism-specific databases

GrameneP49081.
MaizeGDB100137.

Phylogenomic databases

HOGENOMHOG000238464.
KOK01638.

Enzyme and pathway databases

UniPathwayUPA00703; UER00720.

Family and domain databases

InterProIPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view]
PANTHERPTHR21631:SF1. PTHR21631:SF1. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
PIRSFPIRSF001363. Malate_synth. 1 hit.
SUPFAMSSF51645. SSF51645. 1 hit.
TIGRFAMsTIGR01344. malate_syn_A. 1 hit.
PROSITEPS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMASY_MAIZE
AccessionPrimary (citable) accession number: P49081
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: October 16, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways