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P48980

- BGAL_SOLLC

UniProt

P48980 - BGAL_SOLLC

Protein

Beta-galactosidase

Gene
N/A
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 89 (01 Oct 2014)
      Sequence version 1 (01 Feb 1996)
      Previous versions | rss
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    Functioni

    Involved in cell wall degradation. Degrades polysaccharides containing beta-(1-->4)-linked galactans, acting as an exo-(1-->4)-beta-D-galactanase.

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

    pH dependencei

    Optimum pH is 4.5.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei180 – 1801Proton donorSequence Analysis
    Active sitei249 – 2491NucleophileSequence Analysis

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH35. Glycoside Hydrolase Family 35.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidase (EC:3.2.1.23)
    Alternative name(s):
    Acid beta-galactosidase
    Short name:
    Lactase
    Exo-(1-->4)-beta-D-galactanase
    OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
    Taxonomic identifieri4081 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
    ProteomesiUP000004994: Chromosome 12

    Subcellular locationi

    GO - Cellular componenti

    1. plant-type cell wall Source: EnsemblPlants/Gramene
    2. plasmodesma Source: EnsemblPlants/Gramene

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2222Add
    BLAST
    Chaini23 – 835813Beta-galactosidasePRO_0000012195Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP48980.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini749 – 83587SUEL-type lectinPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 35 family.Curated
    Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    OMAiINITRDV.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    IPR000922. Lectin_gal-bd_dom.
    [Graphical view]
    PANTHERiPTHR23421. PTHR23421. 1 hit.
    PfamiPF02140. Gal_Lectin. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view]
    PRINTSiPR00742. GLHYDRLASE35.
    SUPFAMiSSF49785. SSF49785. 3 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    PS50228. SUEL_LECTIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P48980-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGFWMAMLLM LLLCLWVSCG IASVSYDHKA IIVNGQRKIL ISGSIHYPRS    50
    TPEMWPDLIQ KAKEGGVDVI QTYVFWNGHE PEEGKYYFEE RYDLVKFIKV 100
    VQEAGLYVHL RIGPYACAEW NFGGFPVWLK YVPGISFRTN NEPFKAAMQK 150
    FTTKIVDMMK AEKLYETQGG PIILSQIENE YGPMEWELGE PGKVYSEWAA 200
    KMAVDLGTGV PWIMCKQDDV PDPIINTCNG FYCDYFTPNK ANKPKMWTEA 250
    WTAWFTEFGG PVPYRPAEDM AFAVARFIQT GGSFINYYMY HGGTNFGRTS 300
    GGPFIATSYD YDAPLDEFGS LRQPKWGHLK DLHRAIKLCE PALVSVDPTV 350
    TSLGNYQEAR VFKSESGACA AFLANYNQHS FAKVAFGNMH YNLPPWSISI 400
    LPDCKNTVYN TARVGAQSAQ MKMTPVSRGF SWESFNEDAA SHEDDTFTVV 450
    GLLEQINITR DVSDYLWYMT DIEIDPTEGF LNSGNWPWLT VFSAGHALHV 500
    FVNGQLAGTV YGSLENPKLT FSNGINLRAG VNKISLLSIA VGLPNVGPHF 550
    ETWNAGVLGP VSLNGLNEGT RDLTWQKWFY KVGLKGEALS LHSLSGSPSV 600
    EWVEGSLVAQ KQPLSWYKTT FNAPDGNEPL ALDMNTMGKG QVWINGQSLG 650
    RHWPAYKSSG SCSVCNYTGW FDEKKCLTNC GEGSQRWYHV PRSWLYPTGN 700
    LLVVFEEWGG DPYGITLVKR EIGSVCADIY EWQPQLLNWQ RLVSGKFDRP 750
    LRPKAHLKCA PGQKISSIKF ASFGTPEGVC GNFQQGSCHA PRSYDAFKKN 800
    CVGKESCSVQ VTPENFGGDP CRNVLKKLSV EAICS 835
    Length:835
    Mass (Da):93,336
    Last modified:February 1, 1996 - v1
    Checksum:i94C9685F95C4A646
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X83854 mRNA. Translation: CAA58734.1.
    PIRiT06590.
    RefSeqiNP_001234465.1. NM_001247536.1.
    UniGeneiLes.3979.

    Genome annotation databases

    EnsemblPlantsiSolyc12g044880.1.1; Solyc12g044880.1.1; Solyc12g044880.1.
    GeneIDi544167.
    KEGGisly:544167.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X83854 mRNA. Translation: CAA58734.1 .
    PIRi T06590.
    RefSeqi NP_001234465.1. NM_001247536.1.
    UniGenei Les.3979.

    3D structure databases

    ProteinModelPortali P48980.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH35. Glycoside Hydrolase Family 35.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Solyc12g044880.1.1 ; Solyc12g044880.1.1 ; Solyc12g044880.1 .
    GeneIDi 544167.
    KEGGi sly:544167.

    Phylogenomic databases

    OMAi INITRDV.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    IPR000922. Lectin_gal-bd_dom.
    [Graphical view ]
    PANTHERi PTHR23421. PTHR23421. 1 hit.
    Pfami PF02140. Gal_Lectin. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view ]
    PRINTSi PR00742. GLHYDRLASE35.
    SUPFAMi SSF49785. SSF49785. 3 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    PS50228. SUEL_LECTIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Tomato exo-(1-->4)-beta-D-galactanase. Isolation, changes during ripening in normal and mutant tomato fruit, and characterization of a related cDNA clone."
      Carey A.T., Holt K., Picard S., Wilde R., Tucker G.A., Bird C.R., Schuch W., Seymour G.B.
      Plant Physiol. 108:1099-1107(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], PARTIAL PROTEIN SEQUENCE.
      Strain: cv. Ailsa Craig.
      Tissue: Pericarp.

    Entry informationi

    Entry nameiBGAL_SOLLC
    AccessioniPrimary (citable) accession number: P48980
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: February 1, 1996
    Last modified: October 1, 2014
    This is version 89 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3