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P48850 (RS10_RICPR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S10
Gene names
Name:rpsJ
Ordered Locus Names:RP660
OrganismRickettsia prowazekii (strain Madrid E) [Reference proteome] [HAMAP]
Taxonomic identifier272947 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length105 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the binding of tRNA to the ribosomes By similarity. HAMAP-Rule MF_00508

Subunit structure

Part of the 30S ribosomal subunit By similarity. HAMAP-Rule MF_00508

Sequence similarities

Belongs to the ribosomal protein S10P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

tRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 10510530S ribosomal protein S10 HAMAP-Rule MF_00508
PRO_0000146587

Sequences

Sequence LengthMass (Da)Tools
P48850 [UniParc].

Last modified February 1, 1996. Version 1.
Checksum: 54EEFD3DD8FFF400

FASTA10511,932
        10         20         30         40         50         60 
MKNKIKIRLK SFDHRSLDQA TKEIVSAVKR TFATINGPIP LPRKIERFTV NRSPHVHKKS 

        70         80         90        100 
REQFEIRKHK RLLVIDDPNP AVVDALSKVD LAAGVDVVIE LESGE 

« Hide

References

« Hide 'large scale' references
[1]"A chimeric disposition of the elongation factor genes in Rickettsia prowazekii."
Syvaenen A.-C., Amiri H., Jamal A., Andersson S.G.E., Kurland C.G.
J. Bacteriol. 178:6192-6199(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: Madrid E.
[2]"The genome sequence of Rickettsia prowazekii and the origin of mitochondria."
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G.
Nature 396:133-140(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Madrid E.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z54170 Genomic DNA. Translation: CAA90882.1.
AJ235272 Genomic DNA. Translation: CAA15100.1.
PIRB71672.
RefSeqNP_221024.1. NC_000963.1.

3D structure databases

ProteinModelPortalP48850.
SMRP48850. Positions 4-101.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272947.RP660.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAA15100; CAA15100; CAA15100.
GeneID883938.
KEGGrpr:RP660.
PATRIC17902147. VBIRicPro72556_0682.

Phylogenomic databases

eggNOGCOG0051.
HOGENOMHOG000270246.
KOK02946.
OMAVHVNKDS.
OrthoDBEOG6VXFHB.

Family and domain databases

Gene3D3.30.70.600. 1 hit.
HAMAPMF_00508. Ribosomal_S10.
InterProIPR001848. Ribosomal_S10.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERPTHR11700. PTHR11700. 1 hit.
PfamPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSPR00971. RIBOSOMALS10.
SUPFAMSSF54999. SSF54999. 1 hit.
TIGRFAMsTIGR01049. rpsJ_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS10_RICPR
AccessionPrimary (citable) accession number: P48850
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: May 14, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia prowazekii

Rickettsia prowazekii (strain Madrid E): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries