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P48850

- RS10_RICPR

UniProt

P48850 - RS10_RICPR

Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Involved in the binding of tRNA to the ribosomes.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro
    2. tRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S10UniRule annotation
    Gene namesi
    Name:rpsJUniRule annotation
    Ordered Locus Names:RP660
    OrganismiRickettsia prowazekii (strain Madrid E)
    Taxonomic identifieri272947 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000002480: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 10510530S ribosomal protein S10PRO_0000146587Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi272947.RP660.

    Structurei

    3D structure databases

    ProteinModelPortaliP48850.
    SMRiP48850. Positions 4-101.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0051.
    HOGENOMiHOG000270246.
    KOiK02946.
    OMAiVHVNKDS.
    OrthoDBiEOG6VXFHB.

    Family and domain databases

    Gene3Di3.30.70.600. 1 hit.
    HAMAPiMF_00508. Ribosomal_S10.
    InterProiIPR001848. Ribosomal_S10.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view]
    PANTHERiPTHR11700. PTHR11700. 1 hit.
    PfamiPF00338. Ribosomal_S10. 1 hit.
    [Graphical view]
    PRINTSiPR00971. RIBOSOMALS10.
    SUPFAMiSSF54999. SSF54999. 1 hit.
    TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P48850-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNKIKIRLK SFDHRSLDQA TKEIVSAVKR TFATINGPIP LPRKIERFTV    50
    NRSPHVHKKS REQFEIRKHK RLLVIDDPNP AVVDALSKVD LAAGVDVVIE 100
    LESGE 105
    Length:105
    Mass (Da):11,932
    Last modified:February 1, 1996 - v1
    Checksum:i54EEFD3DD8FFF400
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z54170 Genomic DNA. Translation: CAA90882.1.
    AJ235272 Genomic DNA. Translation: CAA15100.1.
    PIRiB71672.
    RefSeqiNP_221024.1. NC_000963.1.

    Genome annotation databases

    EnsemblBacteriaiCAA15100; CAA15100; CAA15100.
    GeneIDi883938.
    KEGGirpr:RP660.
    PATRICi17902147. VBIRicPro72556_0682.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z54170 Genomic DNA. Translation: CAA90882.1 .
    AJ235272 Genomic DNA. Translation: CAA15100.1 .
    PIRi B71672.
    RefSeqi NP_221024.1. NC_000963.1.

    3D structure databases

    ProteinModelPortali P48850.
    SMRi P48850. Positions 4-101.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272947.RP660.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAA15100 ; CAA15100 ; CAA15100 .
    GeneIDi 883938.
    KEGGi rpr:RP660.
    PATRICi 17902147. VBIRicPro72556_0682.

    Phylogenomic databases

    eggNOGi COG0051.
    HOGENOMi HOG000270246.
    KOi K02946.
    OMAi VHVNKDS.
    OrthoDBi EOG6VXFHB.

    Family and domain databases

    Gene3Di 3.30.70.600. 1 hit.
    HAMAPi MF_00508. Ribosomal_S10.
    InterProi IPR001848. Ribosomal_S10.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view ]
    PANTHERi PTHR11700. PTHR11700. 1 hit.
    Pfami PF00338. Ribosomal_S10. 1 hit.
    [Graphical view ]
    PRINTSi PR00971. RIBOSOMALS10.
    SUPFAMi SSF54999. SSF54999. 1 hit.
    TIGRFAMsi TIGR01049. rpsJ_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A chimeric disposition of the elongation factor genes in Rickettsia prowazekii."
      Syvaenen A.-C., Amiri H., Jamal A., Andersson S.G.E., Kurland C.G.
      J. Bacteriol. 178:6192-6199(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: Madrid E.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Madrid E.

    Entry informationi

    Entry nameiRS10_RICPR
    AccessioniPrimary (citable) accession number: P48850
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: February 1, 1996
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia prowazekii
      Rickettsia prowazekii (strain Madrid E): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3