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P48843 (YBAB_BACCI) Reviewed, UniProtKB/Swiss-Prot

Last modified September 21, 2011. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein in bgaB 5'region
Alternative name(s):
ORF1
OrganismBacillus circulans
Taxonomic identifier1397 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillus

Protein attributes

Sequence length366 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 53 family.

Ontologies

Keywords
   Molecular functionGlycosidase
Hydrolase
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

glucosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain‹1 – 366›366Uncharacterized protein in bgaB 5'region
PRO_0000057707

Sites

Active site1391Proton donor By similarity
Active site2491Nucleophile By similarity

Experimental info

Non-terminal residue11

Sequences

Sequence LengthMass (Da)Tools
P48843 [UniParc].

Last modified February 1, 1996. Version 1.
Checksum: 47AC779E04ECB9AB

FASTA36642,046
        10         20         30         40         50         60 
LKEEAFILGM DVSFMDEIEQ HGGSYRDENG QQEDLLTLLK MGDANAIRLR IWNDPVGGFC 

        70         80         90        100        110        120 
NLERTVAVAK RVKEHGLHFL LDFHYSDRWA DPANQWKPKA WEKLSYEELQ RAVCNYTADV 

       130        140        150        160        170        180 
LRTLKEHDAL PDMVQVGNEI TPGMLWDEGR VSGEEHDTDE QWERFAGLVK YGIAAVKSVD 

       190        200        210        220        230        240 
SEIKIMIHID RGGDNAESRK FYDRFEALGV EFDIIGLSYY PWWHGTLDAL RDNLHDLAER 

       250        260        270        280        290        300 
YGKPINVVET AYPWTLEQPD GHEWILNQEE LLLPGYPASV EGQTRYLKDL LQIVREVPGG 

       310        320        330        340        350        360 
LGAGFYYWEP AWIPSKEEWS VGHPNNWGNL TMFDFKGQKL QSFSALKAGL ENETEWDEQP 


NAALIK 

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References

[1]Nelms J., Fotheringham I.G.
Submitted (OCT-1992) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L03425 Genomic DNA. Translation: AAA22259.1.

3D structure databases

ProteinModelPortalP48843.
ModBaseSearch...

Protein family/group databases

CAZyGH53. Glycoside Hydrolase Family 53.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR011683. Glyco_hydro_53.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF07745. Glyco_hydro_53. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameYBAB_BACCI
AccessionPrimary (citable) accession number: P48843
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: September 21, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

SIMILARITY comments

Index of protein domains and families