Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P48839

- AGAA_VIBS7

UniProt

P48839 - AGAA_VIBS7

Protein

Beta-agarase A

Gene

agaA

Organism
Vibrio sp. (strain JT0107)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (01 Feb 1996)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Hydrolyzes agarose and also neoagarotetraose to yield neoagarobiose.

    Catalytic activityi

    Hydrolysis of (1->4)-beta-D-galactosidic linkages in agarose, giving the tetramer as the predominant product.

    GO - Molecular functioni

    1. beta-agarase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    BioCyciMetaCyc:MONOMER-16649.

    Protein family/group databases

    CAZyiGH50. Glycoside Hydrolase Family 50.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-agarase A (EC:3.2.1.81)
    Alternative name(s):
    Agarase 0107
    Gene namesi
    Name:agaA
    OrganismiVibrio sp. (strain JT0107)
    Taxonomic identifieri47913 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020Sequence AnalysisAdd
    BLAST
    Chaini21 – 995975Beta-agarase APRO_0000012215Add
    BLAST

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi781 – 7844Poly-Ala
    Compositional biasi971 – 9744Poly-Gly

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 50 family.Curated

    Keywords - Domaini

    Signal

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P48839-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKIKFLSAAI AASLALPLSA ATLVTSFEEA DYSSSENNAE FLEVSGDATS    50
    EVSTEQATDG NQSIKASFDA AFKPMVVWNW ASWNWGAEDV MSVDVVNPND 100
    TDVTFAIKLI DSDILPDWVD ESQTSLDYFT VSANTTQTFS FNLNGGNEFQ 150
    THGENFSKDK VIGVQFMLSE NDPQVLYFDN IMVDGETVTP PPSDGAVNTQ 200
    TAPVATLAQI EDFETIPDYL RPDGGVNVST TTEIVTKGAA AMAAEFTAGW 250
    NGLVFAGTWN WAELGEHTAV AVDVSNNSDS NIWLYSRIED VNSQGETATR 300
    GVLVKAGESK TIYTSLNDNP SLLTQDERVS ALGLRDIPAD PMSAQNGWGD 350
    FVALDKSQIT AIRYFIGELA SGETSQTLVF DNMRVIKDLN HESAYAEMTD 400
    AMGQNNLVTY AGKVASKEEL AKLSDPEMAA LGELTNRNMY GGNPDSSPAT 450
    DCVLATPASF NACKDADGNW QLVDPAGNAF FSTGVDNIRL QDTYTMTGVS 500
    SDAESESALR QSMFTEIPSD YVNENYGPVH SGPVSQGQAV SFYANNLITR 550
    HASEDVWRDI TVKRMKDWGF NTLGNWTDPA LYANGDVPYV ANGWSTSGAD 600
    RLPVKQIGSG YWGPLPDPWD ANFATNAATM AAEIKAQVEG NEEYLVGIFV 650
    DNEMSWGNVT DVEGSRYAQT LAVFNTDGTD ATTSPAKNSF IWFLENQRYT 700
    GGIADLNAAW GTDYASWDAT SPAQELAYVA GMEADMQFLA WQFAFQYFNT 750
    VNTALKAELP NHLYLGSRFA DWGRTPDVVS AAAAVVDVMS YNIYKDSIAA 800
    ADWDADALSQ IEAIDKPVII GEFHFGALDS GSFAEGVVNA TSQQDRADKM 850
    VSFYESVNAH KNFVGAHWFQ YIDSPLTGRA WDGENYNVGF VSNTDTPYTL 900
    MTDAAREFNC GMYGTDCSSL SNATEAASRA GELYTGTNIG VSHSGPEAPD 950
    PGEPVDPPID PPTPPTGGVT GGGGSAGWLS LLGLAGVFLL RRRKV 995
    Length:995
    Mass (Da):107,276
    Last modified:February 1, 1996 - v1
    Checksum:i437142F6C254124B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D14721 Genomic DNA. Translation: BAA03541.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D14721 Genomic DNA. Translation: BAA03541.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH50. Glycoside Hydrolase Family 50.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    BioCyci MetaCyc:MONOMER-16649.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and sequencing of agaA, a unique agarase 0107 gene from a marine bacterium, Vibrio sp. strain JT0107."
      Sugano Y., Matsumoto T., Kodama H., Noma M.
      Appl. Environ. Microbiol. 59:3750-3756(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiAGAA_VIBS7
    AccessioniPrimary (citable) accession number: P48839
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: February 1, 1996
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3