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P48489

- PP1_ORYSJ

UniProt

P48489 - PP1_ORYSJ

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Protein

Serine/threonine-protein phosphatase PP1

Gene

Os03g0268000

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi75 – 751Manganese 1By similarity
Metal bindingi77 – 771Manganese 1By similarity
Metal bindingi103 – 1031Manganese 1By similarity
Metal bindingi103 – 1031Manganese 2By similarity
Metal bindingi135 – 1351Manganese 2By similarity
Active sitei136 – 1361Proton donorBy similarity
Metal bindingi184 – 1841Manganese 2By similarity
Metal bindingi259 – 2591Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. phosphoprotein phosphatase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Serine/threonine-protein phosphatase PP1 (EC:3.1.3.16)
Gene namesi
Ordered Locus Names:Os03g0268000, LOC_Os03g16110
ORF Names:OJ1364E02.17, OJA1364E02.7
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 3

Organism-specific databases

GrameneiP48489.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 322322Serine/threonine-protein phosphatase PP1PRO_0000058809Add
BLAST

Proteomic databases

PaxDbiP48489.
PRIDEiP48489.

Expressioni

Gene expression databases

ExpressionAtlasiP48489. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os03g16110.2.

Structurei

3D structure databases

ProteinModelPortaliP48489.
SMRiP48489. Positions 20-316.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PPP phosphatase family. PP-1 subfamily.Curated

Phylogenomic databases

eggNOGiCOG0639.
HOGENOMiHOG000172697.
InParanoidiP48489.
KOiK06269.
OMAiYLVMESR.

Family and domain databases

Gene3Di3.60.21.10. 1 hit.
InterProiIPR004843. Calcineurin-like_PHP_apaH.
IPR029052. Metallo-depent_PP-like.
IPR006186. Ser/Thr-sp_prot-phosphatase.
[Graphical view]
PfamiPF00149. Metallophos. 1 hit.
[Graphical view]
PRINTSiPR00114. STPHPHTASE.
SMARTiSM00156. PP2Ac. 1 hit.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 1 hit.
PROSITEiPS00125. SER_THR_PHOSPHATASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P48489-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAAPGAGGQ GGGGMDAVLL DDIIRRLLEV RTARPGKQVQ LSESEIRQLC
60 70 80 90 100
TVSREIFLSQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF
110 120 130 140 150
LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHECAS INRIYGFYDE
160 170 180 190 200
CKRRFNVRLW KVFTDCFNCL PVAALIDDKI LCMHGGLSPD LTHLDEIKSL
210 220 230 240 250
PRPTDVPDTG LLCDLLWSDP GKDVQGWGMN DRGVSYTFGA DKVSEFLEKH
260 270 280 290 300
DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFDNA GAMMSVDETL
310 320
MCSFQILKPA ERKGKFMASN KM
Length:322
Mass (Da):36,166
Last modified:June 13, 2006 - v2
Checksum:iF4C8280134836BE7
GO

Sequence cautioni

The sequence AAP06889.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence AAP06897.1 differs from that shown. Reason: Erroneous gene model prediction.

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti3 – 119AAPGAGGQG → PRRR(PubMed:10080713)Curated
Sequence conflicti17 – 171A → P in AAA74625. (PubMed:10080713)Curated
Sequence conflicti25 – 262RR → PP in AAA74625. (PubMed:10080713)Curated
Sequence conflicti40 – 401Q → H in AAA74625. (PubMed:10080713)Curated
Sequence conflicti51 – 511T → S in AAA74625. (PubMed:10080713)Curated
Sequence conflicti120 – 1201A → G in AAA74625. (PubMed:10080713)Curated
Sequence conflicti157 – 1571V → M in AAA74625. (PubMed:10080713)Curated
Sequence conflicti199 – 2013SLP → RLA in AAA74625. (PubMed:10080713)Curated
Sequence conflicti215 – 2162LL → YF in AAA74625. (PubMed:10080713)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U31773 mRNA. Translation: AAA74625.1.
AC135208 Genomic DNA. Translation: AAP06889.1. Sequence problems.
AC139168 Genomic DNA. Translation: AAP06897.1. Sequence problems.
AK073140 mRNA. No translation available.
PIRiT03304.
RefSeqiNP_001049669.1. NM_001056204.1.
UniGeneiOs.9092.

Genome annotation databases

EnsemblPlantsiOS03T0268000-01; OS03T0268000-01; OS03G0268000.
GeneIDi4332369.
KEGGiosa:4332369.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U31773 mRNA. Translation: AAA74625.1 .
AC135208 Genomic DNA. Translation: AAP06889.1 . Sequence problems.
AC139168 Genomic DNA. Translation: AAP06897.1 . Sequence problems.
AK073140 mRNA. No translation available.
PIRi T03304.
RefSeqi NP_001049669.1. NM_001056204.1.
UniGenei Os.9092.

3D structure databases

ProteinModelPortali P48489.
SMRi P48489. Positions 20-316.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os03g16110.2.

Proteomic databases

PaxDbi P48489.
PRIDEi P48489.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS03T0268000-01 ; OS03T0268000-01 ; OS03G0268000 .
GeneIDi 4332369.
KEGGi osa:4332369.

Organism-specific databases

Gramenei P48489.

Phylogenomic databases

eggNOGi COG0639.
HOGENOMi HOG000172697.
InParanoidi P48489.
KOi K06269.
OMAi YLVMESR.

Gene expression databases

ExpressionAtlasi P48489. baseline.

Family and domain databases

Gene3Di 3.60.21.10. 1 hit.
InterProi IPR004843. Calcineurin-like_PHP_apaH.
IPR029052. Metallo-depent_PP-like.
IPR006186. Ser/Thr-sp_prot-phosphatase.
[Graphical view ]
Pfami PF00149. Metallophos. 1 hit.
[Graphical view ]
PRINTSi PR00114. STPHPHTASE.
SMARTi SM00156. PP2Ac. 1 hit.
[Graphical view ]
SUPFAMi SSF56300. SSF56300. 1 hit.
PROSITEi PS00125. SER_THR_PHOSPHATASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular characterization of catalytic-subunit cDNA sequences encoding protein phosphatases 1 and 2A and study of their roles in the gibberellin-dependent Osamy-c expression in rice."
    Chang M., Wang B., Chen X., Wu R.
    Plant Mol. Biol. 39:105-115(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Seed.
  2. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
    The rice chromosome 3 sequencing consortium
    Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
    , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
    Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiPP1_ORYSJ
AccessioniPrimary (citable) accession number: P48489
Secondary accession number(s): Q84J82
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: June 13, 2006
Last modified: October 29, 2014
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3