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P48489

- PP1_ORYSJ

UniProt

P48489 - PP1_ORYSJ

Protein

Serine/threonine-protein phosphatase PP1

Gene

Os03g0268000

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 88 (01 Oct 2014)
      Sequence version 2 (13 Jun 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi75 – 751Manganese 1By similarity
    Metal bindingi77 – 771Manganese 1By similarity
    Metal bindingi103 – 1031Manganese 1By similarity
    Metal bindingi103 – 1031Manganese 2By similarity
    Metal bindingi135 – 1351Manganese 2By similarity
    Active sitei136 – 1361Proton donorBy similarity
    Metal bindingi184 – 1841Manganese 2By similarity
    Metal bindingi259 – 2591Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein serine/threonine phosphatase activity Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. protein dephosphorylation Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Serine/threonine-protein phosphatase PP1 (EC:3.1.3.16)
    Gene namesi
    Ordered Locus Names:Os03g0268000, LOC_Os03g16110
    ORF Names:OJ1364E02.17, OJA1364E02.7
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiP48489.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 322322Serine/threonine-protein phosphatase PP1PRO_0000058809Add
    BLAST

    Proteomic databases

    PaxDbiP48489.
    PRIDEiP48489.

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os03g16110.2.

    Structurei

    3D structure databases

    ProteinModelPortaliP48489.
    SMRiP48489. Positions 20-316.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PPP phosphatase family. PP-1 subfamily.Curated

    Phylogenomic databases

    eggNOGiCOG0639.
    HOGENOMiHOG000172697.
    KOiK06269.
    OMAiYLVMESR.

    Family and domain databases

    Gene3Di3.60.21.10. 1 hit.
    InterProiIPR004843. Calcineurin-like_PHP_apaH.
    IPR029052. Metallo-depent_PP-like.
    IPR006186. Ser/Thr-sp_prot-phosphatase.
    [Graphical view]
    PfamiPF00149. Metallophos. 1 hit.
    [Graphical view]
    PRINTSiPR00114. STPHPHTASE.
    SMARTiSM00156. PP2Ac. 1 hit.
    [Graphical view]
    SUPFAMiSSF56300. SSF56300. 1 hit.
    PROSITEiPS00125. SER_THR_PHOSPHATASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P48489-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAAPGAGGQ GGGGMDAVLL DDIIRRLLEV RTARPGKQVQ LSESEIRQLC    50
    TVSREIFLSQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF 100
    LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHECAS INRIYGFYDE 150
    CKRRFNVRLW KVFTDCFNCL PVAALIDDKI LCMHGGLSPD LTHLDEIKSL 200
    PRPTDVPDTG LLCDLLWSDP GKDVQGWGMN DRGVSYTFGA DKVSEFLEKH 250
    DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFDNA GAMMSVDETL 300
    MCSFQILKPA ERKGKFMASN KM 322
    Length:322
    Mass (Da):36,166
    Last modified:June 13, 2006 - v2
    Checksum:iF4C8280134836BE7
    GO

    Sequence cautioni

    The sequence AAP06889.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence AAP06897.1 differs from that shown. Reason: Erroneous gene model prediction.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti3 – 119AAPGAGGQG → PRRR(PubMed:10080713)Curated
    Sequence conflicti17 – 171A → P in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti25 – 262RR → PP in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti40 – 401Q → H in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti51 – 511T → S in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti120 – 1201A → G in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti157 – 1571V → M in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti199 – 2013SLP → RLA in AAA74625. (PubMed:10080713)Curated
    Sequence conflicti215 – 2162LL → YF in AAA74625. (PubMed:10080713)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U31773 mRNA. Translation: AAA74625.1.
    AC135208 Genomic DNA. Translation: AAP06889.1. Sequence problems.
    AC139168 Genomic DNA. Translation: AAP06897.1. Sequence problems.
    AK073140 mRNA. No translation available.
    PIRiT03304.
    RefSeqiNP_001049669.1. NM_001056204.1.
    UniGeneiOs.9092.

    Genome annotation databases

    EnsemblPlantsiOS03T0268000-01; OS03T0268000-01; OS03G0268000.
    GeneIDi4332369.
    KEGGiosa:4332369.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U31773 mRNA. Translation: AAA74625.1 .
    AC135208 Genomic DNA. Translation: AAP06889.1 . Sequence problems.
    AC139168 Genomic DNA. Translation: AAP06897.1 . Sequence problems.
    AK073140 mRNA. No translation available.
    PIRi T03304.
    RefSeqi NP_001049669.1. NM_001056204.1.
    UniGenei Os.9092.

    3D structure databases

    ProteinModelPortali P48489.
    SMRi P48489. Positions 20-316.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os03g16110.2.

    Proteomic databases

    PaxDbi P48489.
    PRIDEi P48489.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0268000-01 ; OS03T0268000-01 ; OS03G0268000 .
    GeneIDi 4332369.
    KEGGi osa:4332369.

    Organism-specific databases

    Gramenei P48489.

    Phylogenomic databases

    eggNOGi COG0639.
    HOGENOMi HOG000172697.
    KOi K06269.
    OMAi YLVMESR.

    Family and domain databases

    Gene3Di 3.60.21.10. 1 hit.
    InterProi IPR004843. Calcineurin-like_PHP_apaH.
    IPR029052. Metallo-depent_PP-like.
    IPR006186. Ser/Thr-sp_prot-phosphatase.
    [Graphical view ]
    Pfami PF00149. Metallophos. 1 hit.
    [Graphical view ]
    PRINTSi PR00114. STPHPHTASE.
    SMARTi SM00156. PP2Ac. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56300. SSF56300. 1 hit.
    PROSITEi PS00125. SER_THR_PHOSPHATASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular characterization of catalytic-subunit cDNA sequences encoding protein phosphatases 1 and 2A and study of their roles in the gibberellin-dependent Osamy-c expression in rice."
      Chang M., Wang B., Chen X., Wu R.
      Plant Mol. Biol. 39:105-115(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Tissue: Seed.
    2. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
      The rice chromosome 3 sequencing consortium
      Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
      , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
      Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiPP1_ORYSJ
    AccessioniPrimary (citable) accession number: P48489
    Secondary accession number(s): Q84J82
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: June 13, 2006
    Last modified: October 1, 2014
    This is version 88 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3