Reviewed,
UniProtKB/Swiss-Prot P48347 (14310_ARATH)
Last modified
November 25, 2008.
Version 64.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: 14-3-3-like protein GF14 epsilon Alternative name(s): General regulatory factor 10 | ||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 254 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes. |
| Sequence similarities | Belongs to the 14-3-3 family. |
Ontologies
Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Molecular function | protein domain specific binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P48347-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P48347-2) The sequence of this isoform differs from the canonical sequence as follows: 254-254: N → V |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The Arabidopsis 14-3-3 multigene family." Wu K., Rooney M.F., Ferl R.J. Plant Physiol. 114:1421-1431(1997) [PubMed: 9276953] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Strain: cv. Columbia. |
| [2] | "Sequences of five Arabidopsis general regulatory factor (GRF) genes encoding 14-3-3 proteins." Chung H.-J., Shanker S., Ferl R.J. (er) Plant Gene Register PGR99-114 Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. Columbia. |
| [3] | "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. Davis R.W.Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [4] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Strain: cv. Columbia. |
| [5] | "Full-length cDNA from Arabidopsis thaliana." Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
Cross-references
Sequence databases | |
|---|---|
| U36446 mRNA. Translation: AAA79699.1. AF145302 Genomic DNA. Translation: AAD51785.1. AC068562 Genomic DNA. Translation: AAF87261.1. AF334382 mRNA. Translation: AAG50088.1. AY054505 mRNA. Translation: AAK96696.1. AY058834 mRNA. Translation: AAL24222.1. AY062838 mRNA. Translation: AAL32916.1. AY081674 mRNA. Translation: AAM10236.1. AY087580 mRNA. Translation: AAM65122.1. | |
| PIR | H86355. |
| RefSeq | NP_564167.1. |
| UniGene | At.24553 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1O9E based on UniProtKB P93343. |
| SMR | P48347. Positions 4-233. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P48347. |
Genome annotation databases | |
| GeneID | 838837. |
| GenomeReviews | Gene locus AT1G22300 in contig CT485782_GR. |
| KEGG | ath:AT1G22300. |
| NMPDR | fig|3702.1.peg.2596. |
Organism-specific databases | |
| TAIR | At1g22300. |
Gene expression databases | |
| ArrayExpress | P48347. |
Family and domain databases | |
| InterPro | IPR000308. 14-3-3. [Graphical view] |
| Gene3D | G3DSA:1.20.190.20. 14-3-3. 1 hit. |
| PANTHER | PTHR18860. 14-3-3. 1 hit. |
| Pfam | PF00244. 14-3-3. 1 hit. [Graphical view] |
| PIRSF | PIRSF000868. 14-3-3. 1 hit. |
| PRINTS | PR00305. 1433ZETA. |
| ProDom | PD000600. 14-3-3. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00101. 14_3_3. 1 hit. [Graphical view] |
| PROSITE | PS00796. 1433_1. 1 hit. PS00797. 1433_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | 14310_ARATH | ||||||||
| Accession | Primary (citable) accession number: P48347 Secondary accession number(s): Q9LME5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| UniProtKB secondary accession numbers Index of UniProtKB secondary accession numbers |
| SIMILARITY comments Index of protein domains and families |

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