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Protein

Putative ATP-dependent Clp protease proteolytic subunit-like

Gene

clpP-B

Organism
Cyanophora paradoxa
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Has lost the two conserved residues (Ser and His) proposed to be part of the active site. Therefore it could be inactive.

GO - Molecular functioni

  1. serine-type endopeptidase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BRENDAi3.4.21.92. 6185.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ATP-dependent Clp protease proteolytic subunit-like
Alternative name(s):
Endopeptidase Clp-like
Gene namesi
Name:clpP-B
Synonyms:clpP2
Encoded oniPlastid; Cyanelle
OrganismiCyanophora paradoxa
Taxonomic identifieri2762 [NCBI]
Taxonomic lineageiEukaryotaGlaucocystophyceaeCyanophoraceaeCyanophora

Subcellular locationi

GO - Cellular componenti

  1. cyanelle Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cyanelle, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 199199Putative ATP-dependent Clp protease proteolytic subunit-likePRO_0000179729Add
BLAST

Interactioni

Subunit structurei

Component of the chloroplastic Clp protease core complex.

Structurei

3D structure databases

ProteinModelPortaliP48254.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase S14 family.Curated

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
InterProiIPR001907. ClpP.
IPR029045. ClpP/crotonase-like_dom.
IPR023562. ClpP/TepA.
[Graphical view]
PANTHERiPTHR10381. PTHR10381. 1 hit.
PfamiPF00574. CLP_protease. 1 hit.
[Graphical view]
PRINTSiPR00127. CLPPROTEASEP.
SUPFAMiSSF52096. SSF52096. 1 hit.

Sequencei

Sequence statusi: Complete.

P48254-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPIGYPLVKA MDKDRFISYF LINNALLNER VIFLCNYEDA TDESIYIGML
60 70 80 90 100
LYLESENSQK PVSFYINSSI TFPNLCFGLY DTILQIKADI VTICLGLAGG
110 120 130 140 150
MSSLILAAGT KGQRFALPNS RIMMQEPLID GGVNGQATDL AIEAKELMDT
160 170 180 190
KEILINLYHE RTGQPKPVIE KDLQRPRYFS AQAAKEYGFI DSLLMASNG
Length:199
Mass (Da):22,195
Last modified:February 1, 1996 - v1
Checksum:iA9F15821FB15B948
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U30821 Genomic DNA. Translation: AAA81214.1.
PIRiT06871.
RefSeqiNP_043183.1. NC_001675.1.

Genome annotation databases

GeneIDi801552.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U30821 Genomic DNA. Translation: AAA81214.1.
PIRiT06871.
RefSeqiNP_043183.1. NC_001675.1.

3D structure databases

ProteinModelPortaliP48254.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi801552.

Enzyme and pathway databases

BRENDAi3.4.21.92. 6185.

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
InterProiIPR001907. ClpP.
IPR029045. ClpP/crotonase-like_dom.
IPR023562. ClpP/TepA.
[Graphical view]
PANTHERiPTHR10381. PTHR10381. 1 hit.
PfamiPF00574. CLP_protease. 1 hit.
[Graphical view]
PRINTSiPR00127. CLPPROTEASEP.
SUPFAMiSSF52096. SSF52096. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence of the cyanelle DNA from Cyanophora paradoxa."
    Stirewalt V.L., Michalowski C.B., Loeffelhardt W., Bohnert H.J., Bryant D.A.
    Plant Mol. Biol. Rep. 13:327-332(1995)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UTEX LB 555 / Pringsheim.
  2. "The complete sequence of the cyanelle genome of Cyanophora paradoxa: the genetic complexity of a primitive plastid."
    Loeffelhardt W., Stirewalt V.L., Michalowski C.B., Annarella M., Farley J.Y., Schluchter W.M., Chung S., Newmann-Spallart C., Steiner J.M., Jakowitsch J., Bohnert H.J., Bryant D.A.
    (In) Schenk H.E.A., Herrmann R., Jeon K.W., Mueller N.E., Schwemmler W. (eds.); Eukaryotism and symbiosis, pp.40-48, Springer-Verlag, Heidelberg (1997)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UTEX LB 555 / Pringsheim.

Entry informationi

Entry nameiCLPPL_CYAPA
AccessioniPrimary (citable) accession number: P48254
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: January 7, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.