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Protein

Ribosomal protein rpl-36.A

Gene

rpl-36.A

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal protein rpl-36.ACurated
Alternative name(s):
60S ribosomal protein L44
L41
Gene namesi
Name:rpl-36.AImported
Synonyms:rpl-41Imported
ORF Names:C09H10.2Imported
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC09H10.2 ; CE02131 ; WBGene00004454 ; rpl-36.A

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001491272 – 105Ribosomal protein rpl-36.ACuratedAdd BLAST104

Proteomic databases

EPDiP48166
PaxDbiP48166
PeptideAtlasiP48166
PRIDEiP48166

Expressioni

Gene expression databases

BgeeiWBGene00004454

Interactioni

Protein-protein interaction databases

BioGridi40005, 1 interactor
STRINGi6239.C09H10.2.3

Structurei

3D structure databases

ProteinModelPortaliP48166
SMRiP48166
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3464 Eukaryota
COG1631 LUCA
GeneTreeiENSGT00390000018085
HOGENOMiHOG000224989
InParanoidiP48166
KOiK02929
OMAiYGGFPRP
OrthoDBiEOG091G12JU
PhylomeDBiP48166

Family and domain databases

InterProiView protein in InterPro
IPR000552 Ribosomal_L44e
IPR011332 Ribosomal_zn-bd
PANTHERiPTHR10369 PTHR10369, 1 hit
PfamiView protein in Pfam
PF00935 Ribosomal_L44, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002841 Ribosomal_L44e, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
PROSITEiView protein in PROSITE
PS01172 RIBOSOMAL_L44E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P48166-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNVPKARRT FCDGKCRKHT NHKVTQYKKG KESKFAQGRR RYDRKQSGFG
60 70 80 90 100
GQTKPIFRKK AKTTKKIVLR MECTECKHKK QLPIKRCKHF ELGGQKKSRG

QVIQF
Length:105
Mass (Da):12,367
Last modified:January 23, 2007 - v2
Checksum:i88844E529EEC0758
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z50109 Genomic DNA Translation: CAA90434.1
AF304121 mRNA Translation: AAG50234.1
PIRiT19159
RefSeqiNP_496375.1, NM_063974.7
UniGeneiCel.22880

Genome annotation databases

EnsemblMetazoaiC09H10.2.1; C09H10.2.1; WBGene00004454
C09H10.2.2; C09H10.2.2; WBGene00004454
GeneIDi174695
KEGGicel:CELE_C09H10.2
UCSCiC09H10.2.3 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRL36A_CAEEL
AccessioniPrimary (citable) accession number: P48166
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: March 28, 2018
This is version 110 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health