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P48166

- RL44_CAEEL

UniProt

P48166 - RL44_CAEEL

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Protein
60S ribosomal protein L44
Gene
rpl-41, C09H10.2
Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L44
Alternative name(s):
L41
Gene namesi
Name:rpl-41
ORF Names:C09H10.2
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome II

Organism-specific databases

WormBaseiC09H10.2; CE02131; WBGene00004454; rpl-41.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 10510460S ribosomal protein L44
PRO_0000149127Add
BLAST

Proteomic databases

PaxDbiP48166.

Interactioni

Protein-protein interaction databases

BioGridi40005. 1 interaction.
STRINGi6239.C09H10.2.2.

Structurei

3D structure databases

ProteinModelPortaliP48166.
SMRiP48166. Positions 1-105.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1631.
GeneTreeiENSGT00390000018085.
HOGENOMiHOG000224989.
InParanoidiP48166.
KOiK02929.
OMAiKYKMQLA.
OrthoDBiEOG7D59R2.
PhylomeDBiP48166.

Family and domain databases

Gene3Di3.10.450.80. 1 hit.
InterProiIPR000552. Ribosomal_L44e.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PANTHERiPTHR10369. PTHR10369. 1 hit.
PfamiPF00935. Ribosomal_L44. 1 hit.
[Graphical view]
ProDomiPD002841. Ribosomal_L44e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01172. RIBOSOMAL_L44E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P48166-1 [UniParc]FASTAAdd to Basket

« Hide

MVNVPKARRT FCDGKCRKHT NHKVTQYKKG KESKFAQGRR RYDRKQSGFG    50
GQTKPIFRKK AKTTKKIVLR MECTECKHKK QLPIKRCKHF ELGGQKKSRG 100
QVIQF 105
Length:105
Mass (Da):12,367
Last modified:January 23, 2007 - v2
Checksum:i88844E529EEC0758
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z50109 Genomic DNA. Translation: CAA90434.1.
AF304121 mRNA. Translation: AAG50234.1.
PIRiT19159.
RefSeqiNP_496375.1. NM_063974.7.
UniGeneiCel.22880.

Genome annotation databases

EnsemblMetazoaiC09H10.2; C09H10.2; WBGene00004454.
GeneIDi174695.
KEGGicel:CELE_C09H10.2.
UCSCiC09H10.2.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z50109 Genomic DNA. Translation: CAA90434.1 .
AF304121 mRNA. Translation: AAG50234.1 .
PIRi T19159.
RefSeqi NP_496375.1. NM_063974.7.
UniGenei Cel.22880.

3D structure databases

ProteinModelPortali P48166.
SMRi P48166. Positions 1-105.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 40005. 1 interaction.
STRINGi 6239.C09H10.2.2.

Proteomic databases

PaxDbi P48166.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai C09H10.2 ; C09H10.2 ; WBGene00004454 .
GeneIDi 174695.
KEGGi cel:CELE_C09H10.2.
UCSCi C09H10.2.3. c. elegans.

Organism-specific databases

CTDi 174695.
WormBasei C09H10.2 ; CE02131 ; WBGene00004454 ; rpl-41.

Phylogenomic databases

eggNOGi COG1631.
GeneTreei ENSGT00390000018085.
HOGENOMi HOG000224989.
InParanoidi P48166.
KOi K02929.
OMAi KYKMQLA.
OrthoDBi EOG7D59R2.
PhylomeDBi P48166.

Miscellaneous databases

NextBioi 885110.
PROi P48166.

Family and domain databases

Gene3Di 3.10.450.80. 1 hit.
InterProi IPR000552. Ribosomal_L44e.
IPR011332. Ribosomal_zn-bd.
[Graphical view ]
PANTHERi PTHR10369. PTHR10369. 1 hit.
Pfami PF00935. Ribosomal_L44. 1 hit.
[Graphical view ]
ProDomi PD002841. Ribosomal_L44e. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF57829. SSF57829. 1 hit.
PROSITEi PS01172. RIBOSOMAL_L44E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.
  2. "The Caenorhabditis elegans transcriptome project, a complementary view of the genome."
    Kohara Y., Shin-i T., Suzuki Y., Sugano S., Potdevin M., Thierry-Mieg Y., Thierry-Mieg D., Thierry-Mieg J.
    Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiRL44_CAEEL
AccessioniPrimary (citable) accession number: P48166
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: June 11, 2014
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi