Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P48166

- RL44_CAEEL

UniProt

P48166 - RL44_CAEEL

Protein

60S ribosomal protein L44

Gene

rpl-41

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L44
    Alternative name(s):
    L41
    Gene namesi
    Name:rpl-41
    ORF Names:C09H10.2
    OrganismiCaenorhabditis elegans
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome II

    Organism-specific databases

    WormBaseiC09H10.2; CE02131; WBGene00004454; rpl-41.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 10510460S ribosomal protein L44PRO_0000149127Add
    BLAST

    Proteomic databases

    PaxDbiP48166.

    Interactioni

    Protein-protein interaction databases

    BioGridi40005. 1 interaction.
    STRINGi6239.C09H10.2.2.

    Structurei

    3D structure databases

    ProteinModelPortaliP48166.
    SMRiP48166. Positions 1-105.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L44e family.Curated

    Phylogenomic databases

    eggNOGiCOG1631.
    GeneTreeiENSGT00390000018085.
    HOGENOMiHOG000224989.
    InParanoidiP48166.
    KOiK02929.
    OMAiKYKMQLA.
    OrthoDBiEOG7D59R2.
    PhylomeDBiP48166.

    Family and domain databases

    Gene3Di3.10.450.80. 1 hit.
    InterProiIPR000552. Ribosomal_L44e.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view]
    PANTHERiPTHR10369. PTHR10369. 1 hit.
    PfamiPF00935. Ribosomal_L44. 1 hit.
    [Graphical view]
    ProDomiPD002841. Ribosomal_L44e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF57829. SSF57829. 1 hit.
    PROSITEiPS01172. RIBOSOMAL_L44E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P48166-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVNVPKARRT FCDGKCRKHT NHKVTQYKKG KESKFAQGRR RYDRKQSGFG    50
    GQTKPIFRKK AKTTKKIVLR MECTECKHKK QLPIKRCKHF ELGGQKKSRG 100
    QVIQF 105
    Length:105
    Mass (Da):12,367
    Last modified:January 23, 2007 - v2
    Checksum:i88844E529EEC0758
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z50109 Genomic DNA. Translation: CAA90434.1.
    AF304121 mRNA. Translation: AAG50234.1.
    PIRiT19159.
    RefSeqiNP_496375.1. NM_063974.7.
    UniGeneiCel.22880.

    Genome annotation databases

    EnsemblMetazoaiC09H10.2; C09H10.2; WBGene00004454.
    GeneIDi174695.
    KEGGicel:CELE_C09H10.2.
    UCSCiC09H10.2.3. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z50109 Genomic DNA. Translation: CAA90434.1 .
    AF304121 mRNA. Translation: AAG50234.1 .
    PIRi T19159.
    RefSeqi NP_496375.1. NM_063974.7.
    UniGenei Cel.22880.

    3D structure databases

    ProteinModelPortali P48166.
    SMRi P48166. Positions 1-105.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 40005. 1 interaction.
    STRINGi 6239.C09H10.2.2.

    Proteomic databases

    PaxDbi P48166.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai C09H10.2 ; C09H10.2 ; WBGene00004454 .
    GeneIDi 174695.
    KEGGi cel:CELE_C09H10.2.
    UCSCi C09H10.2.3. c. elegans.

    Organism-specific databases

    CTDi 174695.
    WormBasei C09H10.2 ; CE02131 ; WBGene00004454 ; rpl-41.

    Phylogenomic databases

    eggNOGi COG1631.
    GeneTreei ENSGT00390000018085.
    HOGENOMi HOG000224989.
    InParanoidi P48166.
    KOi K02929.
    OMAi KYKMQLA.
    OrthoDBi EOG7D59R2.
    PhylomeDBi P48166.

    Miscellaneous databases

    NextBioi 885110.
    PROi P48166.

    Family and domain databases

    Gene3Di 3.10.450.80. 1 hit.
    InterProi IPR000552. Ribosomal_L44e.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view ]
    PANTHERi PTHR10369. PTHR10369. 1 hit.
    Pfami PF00935. Ribosomal_L44. 1 hit.
    [Graphical view ]
    ProDomi PD002841. Ribosomal_L44e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF57829. SSF57829. 1 hit.
    PROSITEi PS01172. RIBOSOMAL_L44E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.
    2. "The Caenorhabditis elegans transcriptome project, a complementary view of the genome."
      Kohara Y., Shin-i T., Suzuki Y., Sugano S., Potdevin M., Thierry-Mieg Y., Thierry-Mieg D., Thierry-Mieg J.
      Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: Bristol N2.

    Entry informationi

    Entry nameiRL44_CAEEL
    AccessioniPrimary (citable) accession number: P48166
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 85 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Caenorhabditis elegans
      Caenorhabditis elegans: entries, gene names and cross-references to WormBase
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3