P48029 (SC6A8_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 113.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sodium- and chloride-dependent creatine transporter 1 Short name=CT1 Short name=Creatine transporter 1 Alternative name(s): Solute carrier family 6 member 8 | ||
| Gene names |
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| Organism | Homo sapiens (Human) | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 635 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Required for the uptake of creatine in muscles and brain. |
| Subcellular location | |
| Tissue specificity | Predominantly expressed in skeletal muscle and kidney. Also found in brain, heart, colon, testis and prostate. Ref.1 Ref.2 |
| Involvement in disease | Defects in SLC6A8 are the cause of X-linked creatine deficiency syndrome (XL-CDS) [MIM:300352]. XL-CDS causes developmental delay, hypotonia, mental retardation, seizures, short stature and midface hypoplasia. Ref.8 Ref.9 Ref.10 Ref.11 |
| Sequence similarities | Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. SLC6A8 subfamily. [View classification] |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Sodium transport Symport Transport |
| Cellular component | Membrane |
| Coding sequence diversity | Polymorphism |
| Disease | Disease mutation |
| Domain | Transmembrane Transmembrane helix |
| Ligand | Sodium |
| PTM | Glycoprotein Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | creatine metabolic process Traceable author statement. Source: Reactome muscle contractionTraceable author statement. Source: ProtInc |
| Cellular component | integral to plasma membrane Inferred from electronic annotation. Source: InterPro |
| Molecular function | creatine:sodium symporter activity Traceable author statement. Source: ProtInc neurotransmitter:sodium symporter activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 635 | 635 | Sodium- and chloride-dependent creatine transporter 1 | PRO_0000214774 | |||||
Regions | |||||||||
| Topological domain | 1 – 60 | 60 | Cytoplasmic Potential | ||||||
| Transmembrane | 61 – 81 | 21 | Helical; Potential | ||||||
| Topological domain | 82 – 87 | 6 | Extracellular Potential | ||||||
| Transmembrane | 88 – 108 | 21 | Helical; Potential | ||||||
| Topological domain | 109 – 138 | 30 | Cytoplasmic Potential | ||||||
| Transmembrane | 139 – 159 | 21 | Helical; Potential | ||||||
| Topological domain | 160 – 230 | 71 | Extracellular Potential | ||||||
| Transmembrane | 231 – 251 | 21 | Helical; Potential | ||||||
| Topological domain | 252 – 269 | 18 | Cytoplasmic Potential | ||||||
| Transmembrane | 270 – 290 | 21 | Helical; Potential | ||||||
| Topological domain | 291 – 304 | 14 | Extracellular Potential | ||||||
| Transmembrane | 305 – 325 | 21 | Helical; Potential | ||||||
| Topological domain | 326 – 341 | 16 | Cytoplasmic Potential | ||||||
| Transmembrane | 342 – 362 | 21 | Helical; Potential | ||||||
| Topological domain | 363 – 394 | 32 | Extracellular Potential | ||||||
| Transmembrane | 395 – 415 | 21 | Helical; Potential | ||||||
| Topological domain | 416 – 444 | 29 | Cytoplasmic Potential | ||||||
| Transmembrane | 445 – 465 | 21 | Helical; Potential | ||||||
| Topological domain | 466 – 479 | 14 | Extracellular Potential | ||||||
| Transmembrane | 480 – 500 | 21 | Helical; Potential | ||||||
| Topological domain | 501 – 520 | 20 | Cytoplasmic Potential | ||||||
| Transmembrane | 521 – 541 | 21 | Helical; Potential | ||||||
| Topological domain | 542 – 560 | 19 | Extracellular Potential | ||||||
| Transmembrane | 561 – 581 | 21 | Helical; Potential | ||||||
| Topological domain | 582 – 635 | 54 | Cytoplasmic Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 620 | 1 | Phosphothreonine Ref.7 | ||||||
| Glycosylation | 192 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 197 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 548 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Natural variant | 87 | 1 | G → R in XL-CDS. Ref.10 | VAR_020525 | |||||
| Natural variant | 132 | 1 | G → V in XL-CDS. Ref.11 | VAR_063707 | |||||
| Natural variant | 164 | 1 | T → S. Corresponds to variant rs642454 [ dbSNP | Ensembl ]. | VAR_034483 | |||||
| Natural variant | 337 | 1 | C → W in XL-CDS. Ref.10 | VAR_063708 | |||||
| Natural variant | 381 | 1 | G → R in XL-CDS. Ref.8 | VAR_020526 | |||||
| Natural variant | 390 | 1 | P → L in XL-CDS. Ref.10 | VAR_020527 | |||||
| Natural variant | 408 | 1 | Missing in XL-CDS. | VAR_020528 | |||||
| Natural variant | 491 | 1 | C → W in XL-CDS. Ref.11 | VAR_063709 | |||||
| Natural variant | 554 | 1 | P → L in XL-CDS. Ref.10 | VAR_020529 | |||||
| Natural variant | 560 | 1 | M → V. Ref.10 | VAR_063710 | |||||
Experimental info | |||||||||
| Sequence conflict | 24 – 25 | 2 | AP → VS in AAB32284. Ref.2 | ||||||
| Sequence conflict | 32 | 1 | A → S in AAB32284. Ref.2 | ||||||
| Sequence conflict | 38 | 1 | V → A in AAB32284. Ref.2 | ||||||
| Sequence conflict | 42 – 45 | 4 | TPGG → APSS in AAB32284. Ref.2 | ||||||
| Sequence conflict | 193 | 1 | A → D in AAB32284. Ref.2 | ||||||
| Sequence conflict | 223 | 1 | G → T in AAB32284. Ref.2 | ||||||
| Sequence conflict | 285 | 1 | A → P in AAC41688. Ref.1 | ||||||
| Sequence conflict | 368 | 1 | A → T in AAB32284. Ref.2 | ||||||
| Sequence conflict | 434 | 1 | P → R in AAH81558. Ref.6 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning, pharmacological characterization, and genomic localization of the human creatine transporter." Nash S.R., Giros B., Kingsmore S.F., Rochelle J.M., Suter S.T., Gregor P., Seldin M.F., Caron M.G. Recept. Channels 2:165-174(1994) [PubMed: 7953292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY. Tissue: Kidney. |
| [2] | "The cloning and expression of a human creatine transporter." Sora I., Richman J., Santoro G., Wei H., Wang Y., Vanderah T., Horvath R., Nguyen M., Waite S., Roeske W.R. Biochem. Biophys. Res. Commun. 204:419-427(1994) [PubMed: 7945388] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY. Tissue: Brain. |
| [3] | "The genomic organization of a human creatine transporter (CRTR) gene located in Xq28." Sandoval N., Bauer D., Brenner V., Coy J.F., Drescher B., Kioschis P., Korn B., Nyakatura G., Poustka A., Reichwald K., Rosenthal A., Platzer M. Genomics 35:383-385(1996) [PubMed: 8661155] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [4] | "Genomic organization of the human creatine transporter and CDM genes." Eichler E.E., Lu F., Shen Y., Muzny D.M., Gibbs R.A., Nelson D.L. Submitted (SEP-1995) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [5] | "The DNA sequence of the human X chromosome." Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. Bentley D.R.Nature 434:325-337(2005) [PubMed: 15772651] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Eye and Testis. |
| [7] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed: 18691976] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-620, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "X-linked mental retardation with seizures and carrier manifestations is caused by a mutation in the creatine-transporter gene (SLC6A8) located in Xq28." Hahn K.A., Salomons G.S., Tackels-Horne D., Wood T.C., Taylor H.A., Schroer R.J., Lubs H.A., Jakobs C., Olson R.L., Holden K.R., Stevenson R.E., Schwartz C.E. Am. J. Hum. Genet. 70:1349-1356(2002) [PubMed: 11898126] [Abstract] Cited for: VARIANT XL-CDS ARG-381. |
| [9] | "X-linked creatine deficiency syndrome: a novel mutation in creatine transporter gene SLC6A8." Bizzi A., Bugiani M., Salomons G.S., Hunneman D.H., Moroni I., Estienne M., Danesi U., Jakobs C., Uziel G. Ann. Neurol. 52:227-231(2002) [PubMed: 12210795] [Abstract] Cited for: VARIANT XL-CDS PHE-408 DEL. |
| [10] | "High prevalence of SLC6A8 deficiency in X-linked mental retardation." Rosenberg E.H., Almeida L.S., Kleefstra T., deGrauw R.S., Yntema H.G., Bahi N., Moraine C., Ropers H.-H., Fryns J.-P., deGrauw T.J., Jakobs C., Salomons G.S. Am. J. Hum. Genet. 75:97-105(2004) [PubMed: 15154114] [Abstract] Cited for: VARIANTS XL-CDS ARG-87; TRP-337; LEU-390 AND LEU-554, VARIANT VAL-560. |
| [11] | "High frequency of creatine deficiency syndromes in patients with unexplained mental retardation." Lion-Francois L., Cheillan D., Pitelet G., Acquaviva-Bourdain C., Bussy G., Cotton F., Guibaud L., Gerard D., Rivier C., Vianey-Saban C., Jakobs C., Salomons G.S., des Portes V. Neurology 67:1713-1714(2006) [PubMed: 17101918] [Abstract] Cited for: VARIANTS XL-CDS VAL-132 AND TRP-491. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | L31409 mRNA. Translation: AAC41688.1. S74039 mRNA. Translation: AAB32284.1. U52111 Genomic DNA. No translation available. Z66539 Genomic DNA. Translation: CAA91442.1. U36341 Genomic DNA. Translation: AAA79507.1. BC012355 mRNA. Translation: AAH12355.1. BC081558 mRNA. Translation: AAH81558.1. |
| IPI | IPI00007582. |
| PIR | G02095. JC2386. |
| RefSeq | NP_001136277.1. NM_001142805.1. NP_001136278.1. NM_001142806.1. NP_005620.1. NM_005629.3. |
| UniGene | Hs.540696. |
3D structure databases | |
| ProteinModelPortal | P48029. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P48029. |
PTM databases | |
| PhosphoSite | P48029. |
Polymorphism databases | |
| DMDM | 1352529. |
Proteomic databases | |
| PRIDE | P48029. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000253122; ENSP00000253122; ENSG00000130821. |
| GeneID | 6535. |
| KEGG | hsa:6535. |
| UCSC | uc004fib.2. human. |
Organism-specific databases | |
| CTD | 6535. |
| GeneCards | GC0XP152953. |
| H-InvDB | HIX0017134. |
| HGNC | HGNC:11055. SLC6A8. |
| HPA | HPA008802. |
| MIM | 300036. gene. 300352. phenotype. |
| neXtProt | NX_P48029. |
| Orphanet | 52503. X-linked creatine transporter deficiency. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG06111. |
| HOVERGEN | HBG071421. |
| OMA | PPRETWT. |
| OrthoDB | EOG4M3984. |
Enzyme and pathway databases | |
| Reactome | REACT_111217. Metabolism. |
Gene expression databases | |
| ArrayExpress | P48029. |
| Bgee | P48029. |
| CleanEx | HS_SLC6A8. |
| Genevestigator | P48029. |
| GermOnline | ENSG00000130821. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000175. Na/ntran_symport. IPR002984. Na/ntran_symport_creatine. [Graphical view] |
| KO | K05041. |
| PANTHER | PTHR11616. Na/ntran_symport. 1 hit. |
| Pfam | PF00209. SNF. 1 hit. [Graphical view] |
| PRINTS | PR01199. CRTTRANSPORT. PR00176. NANEUSMPORT. |
| PROSITE | PS00610. NA_NEUROTRAN_SYMP_1. 1 hit. PS00754. NA_NEUROTRAN_SYMP_2. 1 hit. PS50267. NA_NEUROTRAN_SYMP_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| DrugBank | DB00148. Creatine. |
| NextBio | 25427. |
| SOURCE | Search... |
Entry information
| Entry name | SC6A8_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P48029 Secondary accession number(s): Q66I36 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with