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Protein

Homeobox protein knotted-1-like 5

Gene

KNAT5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi302 – 365Homeobox; TALE-typePROSITE-ProRule annotationAdd BLAST64

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR

GO - Biological processi

  • cellular response to ethylene stimulus Source: TAIR
  • detection of ethylene stimulus Source: TAIR

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox protein knotted-1-like 5
Alternative name(s):
Homeodomain-containing protein 1
Protein KNAT5
Gene namesi
Name:KNAT5
Synonyms:ATH1
Ordered Locus Names:At4g32040
ORF Names:F10N7.150
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G32040
TAIRilocus:2116632 AT4G32040

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000489611 – 383Homeobox protein knotted-1-like 5Add BLAST383

Proteomic databases

PaxDbiP48002

Expressioni

Gene expression databases

ExpressionAtlasiP48002 baseline and differential
GenevisibleiP48002 AT

Interactioni

Subunit structurei

May form heterodimeric complex with the TALE/BELL protein BEL1, BLH1 and BLH2. Interacts with OFP1, OFP2, OFP3 and OFP4.3 Publications

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi1462119 interactors.
IntActiP48002 21 interactors.
STRINGi3702.AT4G32040.1

Structurei

3D structure databases

ProteinModelPortaliP48002
SMRiP48002
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini281 – 301ELKPROSITE-ProRule annotationAdd BLAST21

Sequence similaritiesi

Belongs to the TALE/KNOX homeobox family.PROSITE-ProRule annotation

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG0773 Eukaryota
ENOG410XPMQ LUCA
HOGENOMiHOG000272741
InParanoidiP48002
OMAiRNWNSNS
OrthoDBiEOG09360IWU
PhylomeDBiP48002

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR005539 ELK_dom
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR008422 Homeobox_KN_domain
IPR005540 KNOX1
IPR005541 KNOX2
PfamiView protein in Pfam
PF03789 ELK, 1 hit
PF05920 Homeobox_KN, 1 hit
PF03790 KNOX1, 1 hit
PF03791 KNOX2, 1 hit
SMARTiView protein in SMART
SM01188 ELK, 1 hit
SM00389 HOX, 1 hit
SM01255 KNOX1, 1 hit
SM01256 KNOX2, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51213 ELK, 1 hit
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

P48002-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFNSSHLLP PQEDLPLRHF TDQSQQPPPQ RHFSETPSLV TASFLNLPTT
60 70 80 90 100
LTTADSDLAP PHRNGDNSVA DTNPRWLSFH SEMQNTGEVR SEVIDGVNAD
110 120 130 140 150
GETILGVVGG EDWRSASYKA AILRHPMYEQ LLAAHVACLR VATPVDQIPR
160 170 180 190 200
IDAQLSQLHT VAAKYSTLGV VVDNKELDHF MSHYVVLLCS FKEQLQHHVC
210 220 230 240 250
VHAMEAITAC WEIEQSLQSL TGVSPSESNG KTMSDDEDDN QVESEVNMFD
260 270 280 290 300
GSLDGSDCLM GFGPLVPTER ERSLMERVKK ELKHELKQGF KEKIVDIREE
310 320 330 340 350
IMRKRRAGKL PGDTTSVLKE WWRTHSKWPY PTEEDKAKLV QETGLQLKQI
360 370 380
NNWFINQRKR NWNSNSSTSS TLTKNKRKRT GKS
Length:383
Mass (Da):43,284
Last modified:December 1, 2000 - v2
Checksum:iD9B91F16F088E10F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF306661 mRNA Translation: AAL37042.1
D43962 mRNA Translation: BAA22602.1
AL021636 Genomic DNA Translation: CAA16585.1
AL161580 Genomic DNA Translation: CAB79922.1
CP002687 Genomic DNA Translation: AEE85997.1
BT026033 mRNA Translation: ABG48389.1
X92394 mRNA Translation: CAA63132.1
PIRiT04641
RefSeqiNP_194932.1, NM_119356.4
UniGeneiAt.20704

Genome annotation databases

EnsemblPlantsiAT4G32040.1; AT4G32040.1; AT4G32040
GeneIDi829335
GrameneiAT4G32040.1; AT4G32040.1; AT4G32040
KEGGiath:AT4G32040

Similar proteinsi

Entry informationi

Entry nameiKNAT5_ARATH
AccessioniPrimary (citable) accession number: P48002
Secondary accession number(s): O49387, Q548P2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: December 1, 2000
Last modified: April 25, 2018
This is version 136 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome