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Protein

Homeobox protein knotted-1-like 5

Gene

KNAT5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi302 – 365Homeobox; TALE-typePROSITE-ProRule annotationAdd BLAST64

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • cellular response to ethylene stimulus Source: TAIR
  • detection of ethylene stimulus Source: TAIR

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox protein knotted-1-like 5
Alternative name(s):
Homeodomain-containing protein 1
Protein KNAT5
Gene namesi
Name:KNAT5
Synonyms:ATH1
Ordered Locus Names:At4g32040
ORF Names:F10N7.150
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G32040.
TAIRilocus:2116632. AT4G32040.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000489611 – 383Homeobox protein knotted-1-like 5Add BLAST383

Proteomic databases

PaxDbiP48002.

Expressioni

Gene expression databases

ExpressionAtlasiP48002. baseline and differential.
GenevisibleiP48002. AT.

Interactioni

Subunit structurei

May form heterodimeric complex with the TALE/BELL protein BEL1, BLH1 and BLH2. Interacts with OFP1, OFP2, OFP3 and OFP4.3 Publications

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi14621. 19 interactors.
IntActiP48002. 21 interactors.
STRINGi3702.AT4G32040.1.

Structurei

3D structure databases

ProteinModelPortaliP48002.
SMRiP48002.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini281 – 301ELKPROSITE-ProRule annotationAdd BLAST21

Sequence similaritiesi

Belongs to the TALE/KNOX homeobox family.PROSITE-ProRule annotation

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG0773. Eukaryota.
ENOG410XPMQ. LUCA.
HOGENOMiHOG000272741.
InParanoidiP48002.
OMAiRNWNSNS.
OrthoDBiEOG09360IWU.
PhylomeDBiP48002.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR005539. ELK_dom.
IPR009057. Homeobox-like.
IPR001356. Homeobox_dom.
IPR008422. Homeobox_KN_domain.
IPR005540. KNOX1.
IPR005541. KNOX2.
PfamiView protein in Pfam
PF03789. ELK. 1 hit.
PF05920. Homeobox_KN. 1 hit.
PF03790. KNOX1. 1 hit.
PF03791. KNOX2. 1 hit.
SMARTiView protein in SMART
SM01188. ELK. 1 hit.
SM00389. HOX. 1 hit.
SM01255. KNOX1. 1 hit.
SM01256. KNOX2. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS51213. ELK. 1 hit.
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P48002-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFNSSHLLP PQEDLPLRHF TDQSQQPPPQ RHFSETPSLV TASFLNLPTT
60 70 80 90 100
LTTADSDLAP PHRNGDNSVA DTNPRWLSFH SEMQNTGEVR SEVIDGVNAD
110 120 130 140 150
GETILGVVGG EDWRSASYKA AILRHPMYEQ LLAAHVACLR VATPVDQIPR
160 170 180 190 200
IDAQLSQLHT VAAKYSTLGV VVDNKELDHF MSHYVVLLCS FKEQLQHHVC
210 220 230 240 250
VHAMEAITAC WEIEQSLQSL TGVSPSESNG KTMSDDEDDN QVESEVNMFD
260 270 280 290 300
GSLDGSDCLM GFGPLVPTER ERSLMERVKK ELKHELKQGF KEKIVDIREE
310 320 330 340 350
IMRKRRAGKL PGDTTSVLKE WWRTHSKWPY PTEEDKAKLV QETGLQLKQI
360 370 380
NNWFINQRKR NWNSNSSTSS TLTKNKRKRT GKS
Length:383
Mass (Da):43,284
Last modified:December 1, 2000 - v2
Checksum:iD9B91F16F088E10F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF306661 mRNA. Translation: AAL37042.1.
D43962 mRNA. Translation: BAA22602.1.
AL021636 Genomic DNA. Translation: CAA16585.1.
AL161580 Genomic DNA. Translation: CAB79922.1.
CP002687 Genomic DNA. Translation: AEE85997.1.
BT026033 mRNA. Translation: ABG48389.1.
X92394 mRNA. Translation: CAA63132.1.
PIRiT04641.
RefSeqiNP_194932.1. NM_119356.4.
UniGeneiAt.20704.

Genome annotation databases

EnsemblPlantsiAT4G32040.1; AT4G32040.1; AT4G32040.
GeneIDi829335.
GrameneiAT4G32040.1; AT4G32040.1; AT4G32040.
KEGGiath:AT4G32040.

Similar proteinsi

Entry informationi

Entry nameiKNAT5_ARATH
AccessioniPrimary (citable) accession number: P48002
Secondary accession number(s): O49387, Q548P2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: December 1, 2000
Last modified: September 27, 2017
This is version 133 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families