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P47925

- CWPX_ARATH

UniProt

P47925 - CWPX_ARATH

Protein

Putative cell wall protein

Gene

At2g20870

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative cell wall protein
    Gene namesi
    Ordered Locus Names:At2g20870
    ORF Names:F5H14.16
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G20870.

    Subcellular locationi

    Secretedcell wall Curated

    GO - Cellular componenti

    1. cell wall Source: UniProtKB-SubCell
    2. extracellular region Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell wall, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121Sequence AnalysisAdd
    BLAST
    Chaini22 – 140119Putative cell wall proteinPRO_0000021053Add
    BLAST

    Proteomic databases

    PaxDbiP47925.
    PRIDEiP47925.

    Expressioni

    Tissue specificityi

    Inflorescence.

    Inductioni

    By gibberellins.

    Gene expression databases

    GenevestigatoriP47925.

    Family & Domainsi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG240588.
    HOGENOMiHOG000294230.
    InParanoidiP47925.
    OMAiWHRERIL.
    PhylomeDBiP47925.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P47925-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASSLITSAV IVVVLSLVLG SVEQVSGLRH VPKSPKTTDV KHPDFLVTIE    50
    PKPTILIPGV GRFLLPPKCK KPFYPYNPVT GAPLTGGGIP SYNGGQGAGP 100
    HTQLPGGDDT LVPNPGFEAP TPTIGAGTGS NGQVPPVPLP 140
    Length:140
    Mass (Da):14,260
    Last modified:January 10, 2003 - v2
    Checksum:i5154A98A35469E3F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti37 – 371T → I in CAA52404. (PubMed:8155880)Curated
    Sequence conflicti119 – 1191A → E in CAA52404. (PubMed:8155880)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X74360 mRNA. Translation: CAA52404.1.
    AC006234 Genomic DNA. Translation: AAD20908.1.
    CP002685 Genomic DNA. Translation: AEC07089.1.
    PIRiD84594.
    S43789.
    RefSeqiNP_565490.1. NM_127656.4.
    UniGeneiAt.26797.
    At.7675.

    Genome annotation databases

    EnsemblPlantsiAT2G20870.1; AT2G20870.1; AT2G20870.
    GeneIDi816620.
    KEGGiath:AT2G20870.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X74360 mRNA. Translation: CAA52404.1 .
    AC006234 Genomic DNA. Translation: AAD20908.1 .
    CP002685 Genomic DNA. Translation: AEC07089.1 .
    PIRi D84594.
    S43789.
    RefSeqi NP_565490.1. NM_127656.4.
    UniGenei At.26797.
    At.7675.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi P47925.
    PRIDEi P47925.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G20870.1 ; AT2G20870.1 ; AT2G20870 .
    GeneIDi 816620.
    KEGGi ath:AT2G20870.

    Organism-specific databases

    TAIRi AT2G20870.

    Phylogenomic databases

    eggNOGi NOG240588.
    HOGENOMi HOG000294230.
    InParanoidi P47925.
    OMAi WHRERIL.
    PhylomeDBi P47925.

    Gene expression databases

    Genevestigatori P47925.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Cloning of two gibberellin-regulated cDNAs from Arabidopsis thaliana by subtractive hybridization: expression of the tonoplast water channel, gamma-TIP, is increased by GA3."
      Phillips A.L., Huttly A.K.
      Plant Mol. Biol. 24:603-615(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Landsberg erecta.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    3. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiCWPX_ARATH
    AccessioniPrimary (citable) accession number: P47925
    Secondary accession number(s): Q9SKT2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: January 10, 2003
    Last modified: October 1, 2014
    This is version 73 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names

    External Data

    Dasty 3