Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P47925

- CWPX_ARATH

UniProt

P47925 - CWPX_ARATH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative cell wall protein

Gene

At2g20870

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Putative cell wall protein
Gene namesi
Ordered Locus Names:At2g20870
ORF Names:F5H14.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 2

Organism-specific databases

TAIRiAT2G20870.

Subcellular locationi

Secretedcell wall Curated

GO - Cellular componenti

  1. cell wall Source: UniProtKB-KW
  2. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell wall, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence AnalysisAdd
BLAST
Chaini22 – 140119Putative cell wall proteinPRO_0000021053Add
BLAST

Proteomic databases

PaxDbiP47925.
PRIDEiP47925.

Expressioni

Tissue specificityi

Inflorescence.

Inductioni

By gibberellins.

Gene expression databases

ExpressionAtlasiP47925. baseline and differential.
GenevestigatoriP47925.

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG240588.
HOGENOMiHOG000294230.
InParanoidiP47925.
OMAiWHRERIL.
PhylomeDBiP47925.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P47925-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASSLITSAV IVVVLSLVLG SVEQVSGLRH VPKSPKTTDV KHPDFLVTIE
60 70 80 90 100
PKPTILIPGV GRFLLPPKCK KPFYPYNPVT GAPLTGGGIP SYNGGQGAGP
110 120 130 140
HTQLPGGDDT LVPNPGFEAP TPTIGAGTGS NGQVPPVPLP
Length:140
Mass (Da):14,260
Last modified:January 10, 2003 - v2
Checksum:i5154A98A35469E3F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti37 – 371T → I in CAA52404. (PubMed:8155880)Curated
Sequence conflicti119 – 1191A → E in CAA52404. (PubMed:8155880)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X74360 mRNA. Translation: CAA52404.1.
AC006234 Genomic DNA. Translation: AAD20908.1.
CP002685 Genomic DNA. Translation: AEC07089.1.
PIRiD84594.
S43789.
RefSeqiNP_565490.1. NM_127656.4.
UniGeneiAt.26797.
At.7675.

Genome annotation databases

EnsemblPlantsiAT2G20870.1; AT2G20870.1; AT2G20870.
GeneIDi816620.
KEGGiath:AT2G20870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X74360 mRNA. Translation: CAA52404.1 .
AC006234 Genomic DNA. Translation: AAD20908.1 .
CP002685 Genomic DNA. Translation: AEC07089.1 .
PIRi D84594.
S43789.
RefSeqi NP_565490.1. NM_127656.4.
UniGenei At.26797.
At.7675.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi P47925.
PRIDEi P47925.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT2G20870.1 ; AT2G20870.1 ; AT2G20870 .
GeneIDi 816620.
KEGGi ath:AT2G20870.

Organism-specific databases

TAIRi AT2G20870.

Phylogenomic databases

eggNOGi NOG240588.
HOGENOMi HOG000294230.
InParanoidi P47925.
OMAi WHRERIL.
PhylomeDBi P47925.

Gene expression databases

ExpressionAtlasi P47925. baseline and differential.
Genevestigatori P47925.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning of two gibberellin-regulated cDNAs from Arabidopsis thaliana by subtractive hybridization: expression of the tonoplast water channel, gamma-TIP, is increased by GA3."
    Phillips A.L., Huttly A.K.
    Plant Mol. Biol. 24:603-615(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Landsberg erecta.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiCWPX_ARATH
AccessioniPrimary (citable) accession number: P47925
Secondary accession number(s): Q9SKT2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 10, 2003
Last modified: October 29, 2014
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names

External Data

Dasty 3