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P47925 (CWPX_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative cell wall protein
Gene names
Ordered Locus Names:At2g20870
ORF Names:F5H14.16
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length140 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Secretedcell wall Potential.

Tissue specificity

Inflorescence.

Induction

By gibberellins.

Ontologies

Keywords
   Cellular componentCell wall
Secreted
   DomainSignal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcell wall

Inferred from electronic annotation. Source: UniProtKB-SubCell

extracellular region

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential
Chain22 – 140119Putative cell wall protein
PRO_0000021053

Experimental info

Sequence conflict371T → I in CAA52404. Ref.1
Sequence conflict1191A → E in CAA52404. Ref.1

Sequences

Sequence LengthMass (Da)Tools
P47925 [UniParc].

Last modified January 10, 2003. Version 2.
Checksum: 5154A98A35469E3F

FASTA14014,260
        10         20         30         40         50         60 
MASSLITSAV IVVVLSLVLG SVEQVSGLRH VPKSPKTTDV KHPDFLVTIE PKPTILIPGV 

        70         80         90        100        110        120 
GRFLLPPKCK KPFYPYNPVT GAPLTGGGIP SYNGGQGAGP HTQLPGGDDT LVPNPGFEAP 

       130        140 
TPTIGAGTGS NGQVPPVPLP 

« Hide

References

« Hide 'large scale' references
[1]"Cloning of two gibberellin-regulated cDNAs from Arabidopsis thaliana by subtractive hybridization: expression of the tonoplast water channel, gamma-TIP, is increased by GA3."
Phillips A.L., Huttly A.K.
Plant Mol. Biol. 24:603-615(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Landsberg erecta.
[2]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X74360 mRNA. Translation: CAA52404.1.
AC006234 Genomic DNA. Translation: AAD20908.1.
CP002685 Genomic DNA. Translation: AEC07089.1.
PIRD84594.
S43789.
RefSeqNP_565490.1. NM_127656.4.
UniGeneAt.26797.
At.7675.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbP47925.
PRIDEP47925.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G20870.1; AT2G20870.1; AT2G20870.
GeneID816620.
KEGGath:AT2G20870.

Organism-specific databases

TAIRAT2G20870.

Phylogenomic databases

eggNOGNOG240588.
HOGENOMHOG000294230.
InParanoidP47925.
OMAWHRERIL.
PhylomeDBP47925.

Gene expression databases

GenevestigatorP47925.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameCWPX_ARATH
AccessionPrimary (citable) accession number: P47925
Secondary accession number(s): Q9SKT2
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 10, 2003
Last modified: May 14, 2014
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names