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P47915 (RL29_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 100. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S ribosomal protein L29
Gene names
Name:Rpl29
Synonyms:Rpl43
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length160 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L29e family.

Ontologies

Keywords
   DomainRepeat
   Molecular functionRibonucleoprotein
Ribosomal protein
   PTMAcetylation
Isopeptide bond
Methylation
Phosphoprotein
Ubl conjugation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 16015960S ribosomal protein L29
PRO_0000219136

Regions

Repeat127 – 13481
Repeat135 – 14282
Region127 – 142162 X 8 AA tandem repeats of A-X-A-K-A-P-A-[KQ]

Amino acid modifications

Modified residue51N6-methyllysine By similarity
Modified residue331N6-acetyllysine By similarity
Modified residue1381Phosphoserine By similarity
Cross-link56Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) By similarity
Cross-link73Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) By similarity

Sequences

Sequence LengthMass (Da)Tools
P47915 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 420E1A9ED9709C01

FASTA16017,587
        10         20         30         40         50         60 
MAKSKNHTTH NQSRKWHRNG IKKPRSQRYE SLKGVDPKFL RNMRFAKKHN KKGLKKMQAN 

        70         80         90        100        110        120 
NAKAVSARAE AIKALVKPQA IKPKMPKGPK LKRLAFIAHP KLGKRIRSYM AKGQRLCQPK 

       130        140        150        160 
PKVQTKAGAK APAKAQASAP AQAPKGAQAP KGAQAPVKAP 

« Hide

References

« Hide 'large scale' references
[1]"Cloning a pseudogene and cDNA encoding a 17-kDa ribosomal protein from mouse: structure and regulation of expression."
Rudert F., Garnier J.-M., Schuhbaur B.
Gene 133:249-254(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6, Czech II and FVB/N-3.
Tissue: Brain, Kidney and Mammary gland.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L08651 mRNA. Translation: AAA16857.1.
BC002062 mRNA. Translation: AAH02062.1.
BC081467 mRNA. Translation: AAH81467.1.
BC082292 mRNA. Translation: AAH82292.1.
BC086897 mRNA. Translation: AAH86897.1.
BC086898 mRNA. Translation: AAH86898.1.
PIRJC2012.
RefSeqNP_033108.1. NM_009082.2.
XP_006511722.1. XM_006511659.1.
XP_006511723.1. XM_006511660.1.
XP_990228.1. XM_985134.6.
UniGeneMm.288696.
Mm.359377.
Mm.431965.

3D structure databases

ProteinModelPortalP47915.
SMRP47915. Positions 2-79.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid202976. 1 interaction.
IntActP47915. 5 interactions.
MINTMINT-1581728.
STRING10090.ENSMUSP00000080203.

PTM databases

PhosphoSiteP47915.

Proteomic databases

PaxDbP47915.
PRIDEP47915.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000059802; ENSMUSP00000080203; ENSMUSG00000048758.
ENSMUST00000150576; ENSMUSP00000117834; ENSMUSG00000048758.
GeneID19944.
666642.
KEGGmmu:19944.
mmu:666642.
UCSCuc007avm.2. mouse.

Organism-specific databases

CTD6159.
MGIMGI:99687. Rpl29.

Phylogenomic databases

eggNOGNOG249125.
HOGENOMHOG000139149.
HOVERGENHBG000386.
InParanoidP47915.
KOK02905.
OMAIKTLVKP.
OrthoDBEOG7JT70C.
PhylomeDBP47915.
TreeFamTF313858.

Gene expression databases

BgeeP47915.
CleanExMM_RPL29.
GenevestigatorP47915.

Family and domain databases

InterProIPR002673. Ribosomal_L29e.
[Graphical view]
PANTHERPTHR12884. PTHR12884. 1 hit.
PfamPF01779. Ribosomal_L29e. 1 hit.
[Graphical view]
ProDomPD010314. Ribosomal_L29e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Other

NextBio297465.
PROP47915.
SOURCESearch...

Entry information

Entry nameRL29_MOUSE
AccessionPrimary (citable) accession number: P47915
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 100 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot