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P47774

- CCR7_MOUSE

UniProt

P47774 - CCR7_MOUSE

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Protein

C-C chemokine receptor type 7

Gene
Ccr7, Cmkbr7, Ebi1, Ebi1h
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Receptor for the MIP-3-beta chemokine By similarity.

GO - Molecular functioni

  1. C-C chemokine receptor activity Source: BHF-UCL
  2. C-C motif chemokine 19 receptor activity Source: Ensembl
  3. C-C motif chemokine 21 receptor activity Source: Ensembl
  4. chemokine (C-C motif) ligand 19 binding Source: BHF-UCL
  5. chemokine (C-C motif) ligand 21 binding Source: BHF-UCL
  6. G-protein coupled receptor activity Source: BHF-UCL
  7. protein binding Source: IntAct

GO - Biological processi

  1. actin cytoskeleton organization Source: BHF-UCL
  2. activation of JUN kinase activity Source: BHF-UCL
  3. chemotaxis Source: MGI
  4. establishment of T cell polarity Source: BHF-UCL
  5. immune response Source: MGI
  6. inflammatory response Source: BHF-UCL
  7. interleukin-12 secretion Source: BHF-UCL
  8. lymph node development Source: BHF-UCL
  9. lymphocyte chemotaxis across high endothelial venule Source: BHF-UCL
  10. lymphocyte migration into lymph node Source: BHF-UCL
  11. mature dendritic cell differentiation Source: BHF-UCL
  12. negative regulation of leukocyte apoptotic process Source: BHF-UCL
  13. negative thymic T cell selection Source: BHF-UCL
  14. positive regulation of Cdc42 GTPase activity Source: BHF-UCL
  15. positive regulation of cell motility Source: BHF-UCL
  16. positive regulation of dendritic cell antigen processing and presentation Source: BHF-UCL
  17. positive regulation of dendritic cell chemotaxis Source: BHF-UCL
  18. positive regulation of filopodium assembly Source: BHF-UCL
  19. positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation Source: BHF-UCL
  20. positive regulation of humoral immune response Source: BHF-UCL
  21. positive regulation of hypersensitivity Source: BHF-UCL
  22. positive regulation of immunological synapse formation Source: BHF-UCL
  23. positive regulation of interleukin-12 production Source: BHF-UCL
  24. positive regulation of interleukin-1 beta secretion Source: BHF-UCL
  25. positive regulation of macrophage chemotaxis Source: BHF-UCL
  26. positive regulation of neutrophil chemotaxis Source: BHF-UCL
  27. positive regulation of phagocytosis Source: BHF-UCL
  28. positive regulation of Ras GTPase activity Source: BHF-UCL
  29. positive regulation of receptor-mediated endocytosis Source: BHF-UCL
  30. positive regulation of T cell chemotaxis Source: BHF-UCL
  31. positive regulation of T cell costimulation Source: BHF-UCL
  32. positive regulation of T cell proliferation Source: BHF-UCL
  33. positive regulation of T cell receptor signaling pathway Source: BHF-UCL
  34. positive regulation of T-helper 1 cell differentiation Source: BHF-UCL
  35. positive regulation of thymocyte migration Source: BHF-UCL
  36. positive regulation of tumor necrosis factor production Source: BHF-UCL
  37. regulation of dendritic cell dendrite assembly Source: BHF-UCL
  38. regulation of interferon-gamma production Source: BHF-UCL
  39. regulation of interleukin-1 beta secretion Source: BHF-UCL
  40. regulation of tolerance induction to self antigen Source: BHF-UCL
  41. response to lipopolysaccharide Source: BHF-UCL
  42. response to nitric oxide Source: BHF-UCL
  43. response to prostaglandin E Source: BHF-UCL
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Recommended name:
C-C chemokine receptor type 7
Short name:
C-C CKR-7
Short name:
CC-CKR-7
Short name:
CCR-7
Alternative name(s):
Epstein-Barr virus-induced G-protein coupled receptor 1
Short name:
EBI1
Short name:
EBV-induced G-protein coupled receptor 1
MIP-3 beta receptor
CD_antigen: CD197
Gene namesi
Name:Ccr7
Synonyms:Cmkbr7, Ebi1, Ebi1h
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 11

Organism-specific databases

MGIiMGI:103011. Ccr7.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini25 – 5935Extracellular Reviewed predictionAdd
BLAST
Transmembranei60 – 8627Helical; Name=1; Reviewed predictionAdd
BLAST
Topological domaini87 – 959Cytoplasmic Reviewed prediction
Transmembranei96 – 11621Helical; Name=2; Reviewed predictionAdd
BLAST
Topological domaini117 – 13014Extracellular Reviewed predictionAdd
BLAST
Transmembranei131 – 15222Helical; Name=3; Reviewed predictionAdd
BLAST
Topological domaini153 – 17018Cytoplasmic Reviewed predictionAdd
BLAST
Transmembranei171 – 19121Helical; Name=4; Reviewed predictionAdd
BLAST
Topological domaini192 – 21928Extracellular Reviewed predictionAdd
BLAST
Transmembranei220 – 24728Helical; Name=5; Reviewed predictionAdd
BLAST
Topological domaini248 – 26316Cytoplasmic Reviewed predictionAdd
BLAST
Transmembranei264 – 28926Helical; Name=6; Reviewed predictionAdd
BLAST
Topological domaini290 – 31324Extracellular Reviewed predictionAdd
BLAST
Transmembranei314 – 33118Helical; Name=7; Reviewed predictionAdd
BLAST
Topological domaini332 – 37847Cytoplasmic Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. cell surface Source: MGI
  2. external side of plasma membrane Source: MGI
  3. integral component of membrane Source: UniProtKB-KW
  4. intracellular Source: BHF-UCL
  5. plasma membrane Source: BHF-UCL
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 Reviewed predictionAdd
BLAST
Chaini25 – 378354C-C chemokine receptor type 7PRO_0000012736Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi36 – 361N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi129 ↔ 210 By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiP47774.

PTM databases

PhosphoSiteiP47774.

Expressioni

Gene expression databases

BgeeiP47774.
CleanExiMM_CCR7.
GenevestigatoriP47774.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
CD247P209632EBI-8038963,EBI-1165705From a different organism.

Protein-protein interaction databases

IntActiP47774. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP47774.
SMRiP47774. Positions 52-341.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG149643.
GeneTreeiENSGT00730000110640.
HOGENOMiHOG000234122.
HOVERGENiHBG106917.
InParanoidiQ8CAS2.
KOiK04182.
OMAiCFKKDVR.
OrthoDBiEOG79CXZN.
TreeFamiTF330966.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR001718. Chemokine_CCR7.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PANTHERiPTHR24227. PTHR24227. 1 hit.
PTHR24227:SF29. PTHR24227:SF29. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00657. CCCHEMOKINER.
PR00641. CHEMOKINER7.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P47774-1 [UniParc]FASTAAdd to Basket

« Hide

MDPGKPRKNV LVVALLVIFQ VCFCQDEVTD DYIGENTTVD YTLYESVCFK    50
KDVRNFKAWF LPLMYSVICF VGLLGNGLVI LTYIYFKRLK TMTDTYLLNL 100
AVADILFLLI LPFWAYSEAK SWIFGVYLCK GIFGIYKLSF FSGMLLLLCI 150
SIDRYVAIVQ AVSAHRHRAR VLLISKLSCV GIWMLALFLS IPELLYSGLQ 200
KNSGEDTLRC SLVSAQVEAL ITIQVAQMVF GFLVPMLAMS FCYLIIIRTL 250
LQARNFERNK AIKVIIAVVV VFIVFQLPYN GVVLAQTVAN FNITNSSCET 300
SKQLNIAYDV TYSLASVRCC VNPFLYAFIG VKFRSDLFKL FKDLGCLSQE 350
RLRHWSSCRH VRNASVSMEA ETTTTFSP 378
Length:378
Mass (Da):42,856
Last modified:July 27, 2011 - v2
Checksum:iF027451989B59683
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti164 – 1641A → R in AAA74232. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L31580 mRNA. Translation: AAA74232.1.
AK037965 mRNA. Translation: BAC29909.1.
AK154349 mRNA. Translation: BAE32532.1.
AK154849 mRNA. Translation: BAE32875.1.
AL591366 Genomic DNA. Translation: CAM26977.1.
CH466556 Genomic DNA. Translation: EDL16180.1.
CCDSiCCDS25373.1.
PIRiA55735.
RefSeqiNP_031745.2. NM_007719.2.
UniGeneiMm.2932.

Genome annotation databases

EnsembliENSMUST00000103134; ENSMUSP00000099423; ENSMUSG00000037944.
GeneIDi12775.
KEGGimmu:12775.
UCSCiuc007lih.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L31580 mRNA. Translation: AAA74232.1 .
AK037965 mRNA. Translation: BAC29909.1 .
AK154349 mRNA. Translation: BAE32532.1 .
AK154849 mRNA. Translation: BAE32875.1 .
AL591366 Genomic DNA. Translation: CAM26977.1 .
CH466556 Genomic DNA. Translation: EDL16180.1 .
CCDSi CCDS25373.1.
PIRi A55735.
RefSeqi NP_031745.2. NM_007719.2.
UniGenei Mm.2932.

3D structure databases

ProteinModelPortali P47774.
SMRi P47774. Positions 52-341.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P47774. 1 interaction.

Chemistry

GuidetoPHARMACOLOGYi 64.

Protein family/group databases

GPCRDBi Search...

PTM databases

PhosphoSitei P47774.

Proteomic databases

PRIDEi P47774.

Protocols and materials databases

DNASUi 12775.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000103134 ; ENSMUSP00000099423 ; ENSMUSG00000037944 .
GeneIDi 12775.
KEGGi mmu:12775.
UCSCi uc007lih.1. mouse.

Organism-specific databases

CTDi 1236.
MGIi MGI:103011. Ccr7.

Phylogenomic databases

eggNOGi NOG149643.
GeneTreei ENSGT00730000110640.
HOGENOMi HOG000234122.
HOVERGENi HBG106917.
InParanoidi Q8CAS2.
KOi K04182.
OMAi CFKKDVR.
OrthoDBi EOG79CXZN.
TreeFami TF330966.

Miscellaneous databases

NextBioi 282162.
PROi P47774.
SOURCEi Search...

Gene expression databases

Bgeei P47774.
CleanExi MM_CCR7.
Genevestigatori P47774.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR001718. Chemokine_CCR7.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view ]
PANTHERi PTHR24227. PTHR24227. 1 hit.
PTHR24227:SF29. PTHR24227:SF29. 1 hit.
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00657. CCCHEMOKINER.
PR00641. CHEMOKINER7.
PR00237. GPCRRHODOPSN.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning of human and mouse EBI1, a lymphoid-specific G-protein-coupled receptor encoded on human chromosome 17q12-q21.2."
    Schweickart V.L., Raport C.J., Godiska R., Byers M.G., Eddy R.L. Jr., Shows T.B., Gray P.W.
    Genomics 23:643-650(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6 X CBA.
    Tissue: Thymus.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J and NOD.
    Tissue: Thymus.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  4. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCCR7_MOUSE
AccessioniPrimary (citable) accession number: P47774
Secondary accession number(s): Q8CAS2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 113 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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