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P47722

- DEOC_MYCPI

UniProt

P47722 - DEOC_MYCPI

Protein

Deoxyribose-phosphate aldolase

Gene

deoC

Organism
Mycoplasma pirum
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Feb 1996)
      Previous versions | rss
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    • Comment

    Functioni

    Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.By similarity

    Catalytic activityi

    2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei150 – 1501Schiff-base intermediate with acetaldehydeBy similarity
    Active sitei182 – 1821By similarity

    GO - Molecular functioni

    1. deoxyribose-phosphate aldolase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbohydrate catabolic process Source: UniProtKB-HAMAP
    2. deoxyribonucleotide catabolic process Source: InterPro
    3. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Lyase

    Keywords - Ligandi

    Schiff base

    Enzyme and pathway databases

    UniPathwayiUPA00002; UER00468.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxyribose-phosphate aldolase (EC:4.1.2.4)
    Short name:
    DERA
    Alternative name(s):
    2-deoxy-D-ribose 5-phosphate aldolase
    Phosphodeoxyriboaldolase
    Short name:
    Deoxyriboaldolase
    Gene namesi
    Name:deoC
    OrganismiMycoplasma pirum
    Taxonomic identifieri2122 [NCBI]
    Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 220220Deoxyribose-phosphate aldolasePRO_0000057244Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP47722.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    HAMAPiMF_00114. DeoC_type1.
    InterProiIPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    IPR028581. DeoC_typeI.
    [Graphical view]
    PANTHERiPTHR10889. PTHR10889. 1 hit.
    PfamiPF01791. DeoC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001357. DeoC. 1 hit.
    TIGRFAMsiTIGR00126. deoC. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P47722-1 [UniParc]FASTAAdd to Basket

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    MNYNSLFDHT LLRADASVEE IKQLCDEAVK FNFFSVCVNP SYVPYVKEQL    50
    HNSSVKICTV VGFPLGQTST KQKVYETKIA IKEGADEIDM VLNISEFKEN 100
    CACVVNEIRK YKKVCKKKIL KVIVETALLS ENEIEKATLV VIDGGADFIK 150
    TSTGFSSRGA SIKDIEIMKN VIEKNNSKLK IKASGGIKTL TFVEELIKAG 200
    AERIGSSKSV EIIKETLNKN 220
    Length:220
    Mass (Da):24,421
    Last modified:February 1, 1996 - v1
    Checksum:iE3BB251D8AAA8C78
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L13289 Genomic DNA. Translation: AAA25431.1.
    PIRiB53312.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L13289 Genomic DNA. Translation: AAA25431.1 .
    PIRi B53312.

    3D structure databases

    ProteinModelPortali P47722.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    UniPathwayi UPA00002 ; UER00468 .

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    HAMAPi MF_00114. DeoC_type1.
    InterProi IPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    IPR028581. DeoC_typeI.
    [Graphical view ]
    PANTHERi PTHR10889. PTHR10889. 1 hit.
    Pfami PF01791. DeoC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001357. DeoC. 1 hit.
    TIGRFAMsi TIGR00126. deoC. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Identification of Mycoplasma pirum genes involved in the salvage pathways for nucleosides."
      Tham T.N., Ferris S., Kovacic R., Montagnier L., Blanchard A.
      J. Bacteriol. 175:5281-5285(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: BER.

    Entry informationi

    Entry nameiDEOC_MYCPI
    AccessioniPrimary (citable) accession number: P47722
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: February 1, 1996
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3