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P47412

- RL6_MYCGE

UniProt

P47412 - RL6_MYCGE

Protein

50S ribosomal protein L6

Gene

rplF

Organism
Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 80 (01 Oct 2014)
      Sequence version 1 (01 Feb 1996)
      Previous versions | rss
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    Functioni

    This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciMGEN243273:GH2R-175-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L6UniRule annotation
    Gene namesi
    Name:rplFUniRule annotation
    Synonyms:rpl6UniRule annotation
    Ordered Locus Names:MG166
    OrganismiMycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
    Taxonomic identifieri243273 [NCBI]
    Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma
    ProteomesiUP000000807: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 18418450S ribosomal protein L6PRO_0000131059Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi243273.MG_166.

    Structurei

    3D structure databases

    ProteinModelPortaliP47412.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L6P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0097.
    KOiK02933.
    OMAiGNVITFA.
    OrthoDBiEOG67DPRD.

    Family and domain databases

    Gene3Di3.90.930.12. 2 hits.
    HAMAPiMF_01365_B. Ribosomal_L6_B.
    InterProiIPR000702. Ribosomal_L6.
    IPR020040. Ribosomal_L6_a/b-dom.
    IPR019906. Ribosomal_L6_bac-type.
    IPR002358. Ribosomal_L6_CS.
    [Graphical view]
    PANTHERiPTHR11655. PTHR11655. 1 hit.
    PfamiPF00347. Ribosomal_L6. 2 hits.
    [Graphical view]
    PIRSFiPIRSF002162. Ribosomal_L6. 1 hit.
    PRINTSiPR00059. RIBOSOMALL6.
    SUPFAMiSSF56053. SSF56053. 2 hits.
    TIGRFAMsiTIGR03654. L6_bact. 1 hit.
    PROSITEiPS00525. RIBOSOMAL_L6_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P47412-1 [UniParc]FASTAAdd to Basket

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    MSKIGNRSIK IDPSKVSLMQ TTTLLTIKGP LGENTIKLPK NLPLKFVVEN    50
    DTIKVTNNNN LKQTKILHGT FNALVNNAVI GVTKGFEKKL ILVGVGYRAN 100
    VEGQFLNLQL GYSHPIKELI PNQLTVKVEK NTEITISGIK KELVGQFATE 150
    IRKWRKPEPY KGKGVLYFNE VIVRKQGKTA EGKK 184
    Length:184
    Mass (Da):20,523
    Last modified:February 1, 1996 - v1
    Checksum:i5460B09C1E4D14A1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L43967 Genomic DNA. Translation: AAC71384.1.
    PIRiD64218.
    RefSeqiNP_072829.1. NC_000908.2.
    WP_010869360.1. NC_000908.2.

    Genome annotation databases

    EnsemblBacteriaiAAC71384; AAC71384; MG_166.
    GeneIDi875542.
    KEGGimge:MG_166.
    PATRICi20009764. VBIMycGen98045_0188.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L43967 Genomic DNA. Translation: AAC71384.1 .
    PIRi D64218.
    RefSeqi NP_072829.1. NC_000908.2.
    WP_010869360.1. NC_000908.2.

    3D structure databases

    ProteinModelPortali P47412.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243273.MG_166.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC71384 ; AAC71384 ; MG_166 .
    GeneIDi 875542.
    KEGGi mge:MG_166.
    PATRICi 20009764. VBIMycGen98045_0188.

    Phylogenomic databases

    eggNOGi COG0097.
    KOi K02933.
    OMAi GNVITFA.
    OrthoDBi EOG67DPRD.

    Enzyme and pathway databases

    BioCyci MGEN243273:GH2R-175-MONOMER.

    Family and domain databases

    Gene3Di 3.90.930.12. 2 hits.
    HAMAPi MF_01365_B. Ribosomal_L6_B.
    InterProi IPR000702. Ribosomal_L6.
    IPR020040. Ribosomal_L6_a/b-dom.
    IPR019906. Ribosomal_L6_bac-type.
    IPR002358. Ribosomal_L6_CS.
    [Graphical view ]
    PANTHERi PTHR11655. PTHR11655. 1 hit.
    Pfami PF00347. Ribosomal_L6. 2 hits.
    [Graphical view ]
    PIRSFi PIRSF002162. Ribosomal_L6. 1 hit.
    PRINTSi PR00059. RIBOSOMALL6.
    SUPFAMi SSF56053. SSF56053. 2 hits.
    TIGRFAMsi TIGR03654. L6_bact. 1 hit.
    PROSITEi PS00525. RIBOSOMAL_L6_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33530 / G-37 / NCTC 10195.

    Entry informationi

    Entry nameiRL6_MYCGE
    AccessioniPrimary (citable) accession number: P47412
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: February 1, 1996
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Mycoplasma genitalium
      Mycoplasma genitalium (strain G-37): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3