P47270 (YCHF_MYCGE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribosome-binding ATPase YchF

Gene names

Name:	ychF
Ordered Locus Names:	MG024

Organism

Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) [Complete proteome] [HAMAP]

Taxonomic identifier

243273 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Tenericutes › Mollicutes › Mycoplasmatales › Mycoplasmataceae › Mycoplasma › Mycoplasma genitalium

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner By similarity. HAMAP-Rule MF_00944
Sequence similarities	Belongs to the GTP1/OBG family. YchF/OLA1 subfamily. Contains 1 G (guanine nucleotide-binding) domain.

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW GTP binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 367	367	Ribosome-binding ATPase YchF HAMAP-Rule MF_00944		PRO_0000122458
Regions
	Domain	4 – 130	127	G
	Nucleotide binding	11 – 16	6	ATP By similarity

Sequences

	Sequence		Length	Mass (Da)
	P47270 [UniParc]. Last modified February 1, 1996. Version 1. Checksum: 98AFCFADDE6C9BDC	FASTA	367	41,198
	10 20 30 40 50 60 MLSAGIVGLP NVGKSTLFSA ITNLQVEIAN YPFATIEPNT GIVNVSDERL DKLASLINPE 70 80 90 100 110 120 KIVYTTFRFV DIAGLVKGAS QGQGLGNQFL ANIREVDLIC HVVRCFQDKK IVHVNNTIDP 130 140 150 160 170 180 VFDFEIIVNE LIQADFELIT NRIGKLKRKA ESGDKIAKEE FVLLEIVLNG LKQGQMPIQT 190 200 210 220 230 240 LSESELKTIK SLNLLTAKPI LIVANVSEND LLNLDNNEAL KKLNAFLDQK KIPKAITVCS 250 260 270 280 290 300 LIEKELSGLK LEQRQYFLDE LGLKNYSGLN RVIQAAYQTL NLWSFFTFGK KEVRAWTFKK 310 320 330 340 350 360 GWNAPQCAGQ IHSDFEKGFI KVEVISWDQL FAMKSLQEAK KQGLIRLEGK NYLIKDGDVC NFKFNVT

References

[1]

"The minimal gene complement of Mycoplasma genitalium." Fraser C.M., Gocayne J.D., White O., Adams M.D., Clayton R.A., Fleischmann R.D., Bult C.J., Kerlavage A.R., Sutton G.G., Kelley J.M., Fritchman J.L., Weidman J.F., Small K.V., Sandusky M., Fuhrmann J.L., Nguyen D.T., Utterback T.R., Saudek D.M. , Phillips C.A., Merrick J.M., Tomb J.-F., Dougherty B.A., Bott K.F., Hu P.-C., Lucier T.S., Peterson S.N., Smith H.O., Hutchison C.A. III, Venter J.C. Science 270:397-403(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33530 / G-37 / NCTC 10195.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L43967 Genomic DNA. Translation: AAC71240.1.
PIR	F64202.
RefSeq	NP_072684.1. NC_000908.2.
3D structure databases
ProteinModelPortal	P47270.
ModBase	Search...
Protein-protein interaction databases
STRING	243273.MG_024.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC71240; AAC71240; MG_024.
GeneID	875434.
KEGG	mge:MG_024.
PATRIC	20009424. VBIMycGen98045_0022.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0012.
KO	K06942.
OMA	DGDIMHF.
ProtClustDB	PRK09601.
Enzyme and pathway databases
BioCyc	MGEN243273:GH2R-63-MONOMER.
Family and domain databases
Gene3D	1.10.150.300. 1 hit. 3.10.20.30. 1 hit.
HAMAP	MF_00944. YchF_OLA1_ATPase.
InterPro	IPR012675. Beta-grasp_dom. IPR004396. CHP00092. IPR013029. DUF933. IPR006073. GTP_binding_domain. IPR012676. TGS-like. IPR023192. TGS-like_dom. [Graphical view]
PANTHER	PTHR23305:SF4. PTHR23305:SF4. 1 hit.
Pfam	PF01926. MMR_HSR1. 1 hit. PF06071. YchF-GTPase_C. 1 hit. [Graphical view]
PIRSF	PIRSF006641. CHP00092. 1 hit.
PRINTS	PR00326. GTP1OBG.
SUPFAM	SSF81271. TGS-like. 1 hit.
TIGRFAMs	TIGR00092. TIGR00092. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YCHF_MYCGE

Accession

Primary (citable) accession number: P47270

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1996
Last sequence update:	February 1, 1996
Last modified:	May 1, 2013
This is version 80 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program