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Protein

Uncharacterized protein YJR142W

Gene

YJR142W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • 8-oxo-dGDP phosphatase activity Source: SGD

GO - Biological processi

  • metabolic process Source: GOC
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-31757-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YJR142W
Gene namesi
Ordered Locus Names:YJR142W
ORF Names:J2171
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome X

Organism-specific databases

CYGDiYJR142w.
EuPathDBiFungiDB:YJR142W.
SGDiS000003903. YJR142W.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 342342Uncharacterized protein YJR142WPRO_0000203126Add
BLAST

Proteomic databases

MaxQBiP47173.
PaxDbiP47173.
PeptideAtlasiP47173.

Interactioni

Protein-protein interaction databases

BioGridi33898. 21 interactions.
IntActiP47173. 1 interaction.
STRINGi4932.YJR142W.

Structurei

3D structure databases

ProteinModelPortaliP47173.
SMRiP47173. Positions 127-335.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini155 – 309155Nudix hydrolasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 nudix hydrolase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG0494.
GeneTreeiENSGT00390000016413.
HOGENOMiHOG000264717.
InParanoidiP47173.
OMAiNEKYAVW.
OrthoDBiEOG708W8M.

Family and domain databases

Gene3Di3.90.79.10. 1 hit.
InterProiIPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P47173-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVEKSSKGL EVLVRTQEDD LEGFSFLEIM DRVDPLPLDF ENYKNFKEGI
60 70 80 90 100
YYMCTHDGTK IGFVLKFAIN EMETVCSEIF EETFQLDESR HELRFKSEDF
110 120 130 140 150
DHRNNLIDQL ARKMYLESSL SGVKGWRNEK YAVWVNKKPY VLVERAVAGV
160 170 180 190 200
LGIITYGIHI NGYVLDPKSK KVQFWVPRRS KTKQTWPLML DNIIAGGLGY
210 220 230 240 250
PYGIYETVLK ESMEEANLEK SVIEDNIKAT GSVSYLYFTG DISVTKFNKE
260 270 280 290 300
SDFIVGEVQY VYDLKLSEDI IPKPNDGEVE SFNLFSLQET INALRKKEFK
310 320 330 340
PNCALVMVDF LIRHGYITPE NEPNYLELVT RMHRRLPFPT LN
Length:342
Mass (Da):39,690
Last modified:February 1, 1996 - v1
Checksum:iC0B14FD4DCCB1417
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z49642 Genomic DNA. Translation: CAA89675.1.
AY558091 Genomic DNA. Translation: AAS56417.1.
BK006943 Genomic DNA. Translation: DAA08927.1.
PIRiS57165.
RefSeqiNP_012676.3. NM_001181800.3.

Genome annotation databases

EnsemblFungiiYJR142W; YJR142W; YJR142W.
GeneIDi853607.
KEGGisce:YJR142W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z49642 Genomic DNA. Translation: CAA89675.1.
AY558091 Genomic DNA. Translation: AAS56417.1.
BK006943 Genomic DNA. Translation: DAA08927.1.
PIRiS57165.
RefSeqiNP_012676.3. NM_001181800.3.

3D structure databases

ProteinModelPortaliP47173.
SMRiP47173. Positions 127-335.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi33898. 21 interactions.
IntActiP47173. 1 interaction.
STRINGi4932.YJR142W.

Proteomic databases

MaxQBiP47173.
PaxDbiP47173.
PeptideAtlasiP47173.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYJR142W; YJR142W; YJR142W.
GeneIDi853607.
KEGGisce:YJR142W.

Organism-specific databases

CYGDiYJR142w.
EuPathDBiFungiDB:YJR142W.
SGDiS000003903. YJR142W.

Phylogenomic databases

eggNOGiCOG0494.
GeneTreeiENSGT00390000016413.
HOGENOMiHOG000264717.
InParanoidiP47173.
OMAiNEKYAVW.
OrthoDBiEOG708W8M.

Enzyme and pathway databases

BioCyciYEAST:G3O-31757-MONOMER.

Miscellaneous databases

NextBioi974445.
PROiP47173.

Family and domain databases

Gene3Di3.90.79.10. 1 hit.
InterProiIPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
    Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K.
    , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.
    EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYJ9J_YEAST
AccessioniPrimary (citable) accession number: P47173
Secondary accession number(s): D6VWW1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: June 24, 2015
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 217 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome X
    Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.