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P47173 (YJ9J_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 100. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YJR142W
Gene names
Ordered Locus Names:YJR142W
ORF Names:J2171
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

Present with 217 molecules/cell in log phase SD medium.

Sequence similarities

Contains 1 nudix hydrolase domain.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 342342Uncharacterized protein YJR142W
PRO_0000203126

Regions

Domain155 – 309155Nudix hydrolase

Sequences

Sequence LengthMass (Da)Tools
P47173 [UniParc].

Last modified February 1, 1996. Version 1.
Checksum: C0B14FD4DCCB1417

FASTA34239,690
        10         20         30         40         50         60 
MKVEKSSKGL EVLVRTQEDD LEGFSFLEIM DRVDPLPLDF ENYKNFKEGI YYMCTHDGTK 

        70         80         90        100        110        120 
IGFVLKFAIN EMETVCSEIF EETFQLDESR HELRFKSEDF DHRNNLIDQL ARKMYLESSL 

       130        140        150        160        170        180 
SGVKGWRNEK YAVWVNKKPY VLVERAVAGV LGIITYGIHI NGYVLDPKSK KVQFWVPRRS 

       190        200        210        220        230        240 
KTKQTWPLML DNIIAGGLGY PYGIYETVLK ESMEEANLEK SVIEDNIKAT GSVSYLYFTG 

       250        260        270        280        290        300 
DISVTKFNKE SDFIVGEVQY VYDLKLSEDI IPKPNDGEVE SFNLFSLQET INALRKKEFK 

       310        320        330        340 
PNCALVMVDF LIRHGYITPE NEPNYLELVT RMHRRLPFPT LN 

« Hide

References

« Hide 'large scale' references
[1]"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K. expand/collapse author list , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.
EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z49642 Genomic DNA. Translation: CAA89675.1.
AY558091 Genomic DNA. Translation: AAS56417.1.
BK006943 Genomic DNA. Translation: DAA08927.1.
PIRS57165.
RefSeqNP_012676.3. NM_001181800.3.

3D structure databases

ProteinModelPortalP47173.
SMRP47173. Positions 127-335.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid33898. 20 interactions.
IntActP47173. 1 interaction.
STRING4932.YJR142W.

Proteomic databases

MaxQBP47173.
PaxDbP47173.
PeptideAtlasP47173.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYJR142W; YJR142W; YJR142W.
GeneID853607.
KEGGsce:YJR142W.

Organism-specific databases

CYGDYJR142w.
SGDS000003903. YJR142W.

Phylogenomic databases

eggNOGCOG0494.
GeneTreeENSGT00390000016413.
HOGENOMHOG000264717.
OMANYDATDS.
OrthoDBEOG708W8M.

Enzyme and pathway databases

BioCycYEAST:G3O-31757-MONOMER.

Gene expression databases

GenevestigatorP47173.

Family and domain databases

Gene3D3.90.79.10. 1 hit.
InterProIPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamPF00293. NUDIX. 1 hit.
[Graphical view]
SUPFAMSSF55811. SSF55811. 1 hit.
PROSITEPS51462. NUDIX. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio974445.

Entry information

Entry nameYJ9J_YEAST
AccessionPrimary (citable) accession number: P47173
Secondary accession number(s): D6VWW1
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: June 11, 2014
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome X

Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families