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P47101

- YJ00_YEAST

UniProt

P47101 - YJ00_YEAST

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Protein
UPF0508 protein YJR030C
Gene
YJR030C, J1575L
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Biological processi

  1. hexose catabolic process Source: SGD
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-31668-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0508 protein YJR030C
Gene namesi
Ordered Locus Names:YJR030C
ORF Names:J1575L
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome X

Organism-specific databases

CYGDiYJR030c.
SGDiS000003791. YJR030C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 745745UPF0508 protein YJR030C
PRO_0000203090Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP47101.

Interactioni

Protein-protein interaction databases

BioGridi33783. 5 interactions.
DIPiDIP-5695N.
IntActiP47101. 3 interactions.
MINTiMINT-480071.

Structurei

3D structure databases

ProteinModelPortaliP47101.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi680 – 73657Ser-rich
Add
BLAST

Sequence similaritiesi

Belongs to the UPF0508 family.

Phylogenomic databases

eggNOGiNOG47681.
GeneTreeiENSGT00530000069267.
OMAiESPREAN.
OrthoDBiEOG7XH71B.

Sequencei

Sequence statusi: Complete.

P47101-1 [UniParc]FASTAAdd to Basket

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MELFNKEEAS FETLLKRLLV VCESHSRYHG SSLDPMVKVG HEMRKISGYL    50
RCILRKHAAN HDDMSLTQSI VNSYKSLFKD AQILDLYHNL LFGCMHLLLD 100
ANMSYFRMDS QKLFAVLLFK VYYKLRDIFY VTNEVRLGSL ISAFVYKFKS 150
CYDFISCNSL KYGSVRDVIS GEVSLINLPP IDSNKVINRA YYRLDVKKLA 200
INNKLVEILE LDNGEIAIFE VLSEKMPYTL QTIDNLFQSL ALGNHDLMNV 250
GRSLLFRPFR SGDLDLIRLD DSGAKLKVPI NNSIVLRLTC KDPIQWQEYW 300
KHVIRKLFDS TATKEYKRSG SKISQQVYVR SNNPDYTSPK RNDDMPISSV 350
KISDTIHNGR TLHRSIPLPG SLSSLIETSN EYPDEESLSI MSERATVSED 400
SDLDTSLKDI ESLSCEKLIE LDKSIQVPLS PKYMDTPTLK NIRTASQTFS 450
LESVSPELIE SVASEIDDSE SIISEDGKDK RDKDLFDPDI DFYKPTLYRR 500
KSSSLLSIFS KNKKNLTIDI PKNHSRSLFS LPGNQQSVTP VSATPHDDNV 550
DETYVSFPLS INTSGGAVYF ENDSVKVSLW NGKSWVPLSK DMLCLSLILS 600
GDNETLLIVY KDFEKEKCKL VVKLEPTWKY NRSTAQDVQL RIPSSDFKAS 650
VFGTLHDLTL SIRCAQAAKL VNVLQYQLQS SQTSSLSPST TTGTLSTVSS 700
SSCFSRNVTR SSTENSELAN MKDSSEYISS SLLLSSVKVR QLRNM 745
Length:745
Mass (Da):84,290
Last modified:November 2, 2010 - v3
Checksum:iB287BC72FCE6A211
GO

Sequence cautioni

The sequence CAA60727.1 differs from that shown. Reason: Contains PCR fragment of strain VP102-10A.

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti742 – 7454LRNM → HVKTKADVWKPSRVGYTDIF SQEYKGIVVAIKFVICSDAE GTLYPREYNSRLHDIKRLGR TGLSFTDKKEAYLLEFKNQD VVDHVHKLILPFNTSWQSN in strain: VP102-10A.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X87297 Genomic DNA. Translation: CAA60723.1.
X87298 Genomic DNA. Translation: CAA60727.1. Sequence problems.
Z49530 Genomic DNA. Translation: CAA89557.1.
BK006943 Genomic DNA. Translation: DAA08819.1.
PIRiS57048.
RefSeqiNP_012564.3. NM_001181688.3.

Genome annotation databases

EnsemblFungiiYJR030C; YJR030C; YJR030C.
GeneIDi853487.
KEGGisce:YJR030C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X87297 Genomic DNA. Translation: CAA60723.1 .
X87298 Genomic DNA. Translation: CAA60727.1 . Sequence problems.
Z49530 Genomic DNA. Translation: CAA89557.1 .
BK006943 Genomic DNA. Translation: DAA08819.1 .
PIRi S57048.
RefSeqi NP_012564.3. NM_001181688.3.

3D structure databases

ProteinModelPortali P47101.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 33783. 5 interactions.
DIPi DIP-5695N.
IntActi P47101. 3 interactions.
MINTi MINT-480071.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YJR030C ; YJR030C ; YJR030C .
GeneIDi 853487.
KEGGi sce:YJR030C.

Organism-specific databases

CYGDi YJR030c.
SGDi S000003791. YJR030C.

Phylogenomic databases

eggNOGi NOG47681.
GeneTreei ENSGT00530000069267.
OMAi ESPREAN.
OrthoDBi EOG7XH71B.

Enzyme and pathway databases

BioCyci YEAST:G3O-31668-MONOMER.

Miscellaneous databases

NextBioi 974110.

Gene expression databases

Genevestigatori P47101.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of 24.3 kb from chromosome X reveals five complete open reading frames, all of which correspond to new genes, and a tandem insertion of a Ty1 transposon."
    Zagulski M., Babinska B., Gromadka R., Migdalski A., Rytka J., Sulicka J., Herbert C.J.
    Yeast 11:1179-1186(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c and VP102-10A.
  2. "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
    Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K.
    , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.
    EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.

Entry informationi

Entry nameiYJ00_YEAST
AccessioniPrimary (citable) accession number: P47101
Secondary accession number(s): D6VWK3, P87321, Q05848
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: November 2, 2010
Last modified: May 14, 2014
This is version 74 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

This is a truncated version of an UPF0508 family protein. Strain S288c has a tandem insertion of a Ty1 transposon in position 742, which disrupts the gene coding for this protein and produces two ORFs YJR030C and YJR025C-A. A contiguous sequence of this protein can be found in strain YJM789 (AC A6ZPZ1).

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome X
    Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

External Data

Dasty 3

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