P47072 (YJB6_YEAST) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YJL016W

Gene names

Ordered Locus Names:	YJL016W
ORF Names:	J1320, J1326, YJL017W

Organism

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]

Taxonomic identifier

559292 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › Saccharomyces cerevisiae

Protein attributes

Sequence length	561 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Cytoplasm Ref.5.
Miscellaneous	Present with 3360 molecules/cell in log phase SD medium.
Sequence caution	The sequence CAA89306.1 differs from that shown. Reason: Frameshift at position 319. The sequence CAA89308.1 differs from that shown. Reason: Frameshift at position 319.

Ontologies

Keywords
Cellular component	Cytoplasm
PTM	Phosphoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from direct assay Ref.5. Source: SGD
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 561	561	Uncharacterized protein YJL016W		PRO_0000203075
Amino acid modifications
	Modified residue	482	1	Phosphothreonine Ref.8 Ref.9
	Modified residue	514	1	Phosphoserine Ref.9
	Modified residue	558	1	Phosphoserine Ref.7 Ref.9

Sequences

	Sequence		Length	Mass (Da)
	P47072 [UniParc]. Last modified March 7, 2006. Version 2. Checksum: 21D1541BCFEFDFF6	FASTA	561	63,207
	10 20 30 40 50 60 MGILDSLKKP VNIKSSLPKF SRSATSINLS SHPVSSRSFL ELPPELFSIT KPIFKLLQAH 70 80 90 100 110 120 ANKIYFQSSD AEAVWNVKDS SGHVFEAESI SLLGSHIIIT NSSVQVADVA IIDSPSNINQ 130 140 150 160 170 180 CEISSVGEFL QFNNGQLSIT CNDFGLLEKF KRLCMISIFE FISIYKALTG TVISSYGLRM 190 200 210 220 230 240 SDMHIILNSP FNFKDWCEVY LDGQGWVKVW CHIDKVSKTN NSKSSSDNDA KGKYQIRFYR 250 260 270 280 290 300 DDKSTSSKNC VFFIPDNEYV QDIFFYNINA AEPSKNMNDF FQGLQMIKLV GNVRFCSDTD 310 320 330 340 350 360 FNDVVDSGSI YSSANNGSGD SSSTALNNES PNTTPKSRTF FSPKGHRRNS SHVSSLTSRS 370 380 390 400 410 420 TKKPITNFTT RTNGLLIRPL PHHGVHHLEA MIRFIIPLMD CARLYGRPVQ FKTERTDINS 430 440 450 460 470 480 LMFGLPKLPS VDYFAEEEIA HLMTQEFNPL KEKDTDDTMA LTMSRFSSYL QERMTKVSKR 490 500 510 520 530 540 NTELNFRTFS DVMGMYNTTR DHSKLNCMSD KDNSVKEFSL SDKSNVSSET TNMMNQLQVN 550 560 AHEYKSSMCE RPIVASTSPI A

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X." Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K. , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L. EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679.
[2]	Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c.
[3]	"Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii." Brachat S., Dietrich F.S., Voegeli S., Zhang Z., Stuart L., Lerch A., Gates K., Gaffney T.D., Philippsen P. Genome Biol. 4:R45.1-R45.13(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 295-377, IDENTIFICATION OF FRAMESHIFT. Strain: ATCC 204511 / S288c / AB972.
[4]	"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae." Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J. Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 391-561. Strain: ATCC 204508 / S288c.
[5]	"Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[6]	"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[7]	"Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway." Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J., Mann M., Jensen O.N. Mol. Cell. Proteomics 4:310-327(2005) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-558, MASS SPECTROMETRY. Strain: YAL6B.
[8]	"Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases." Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H. Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-482, MASS SPECTROMETRY.
[9]	"A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-482; SER-514 AND SER-558, MASS SPECTROMETRY.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z49291 Genomic DNA. Translation: CAA89306.1. Frameshift. Z49292 Genomic DNA. Translation: CAA89308.1. Frameshift. AY260898 Genomic DNA. Translation: AAP21766.1. AY692698 Genomic DNA. Translation: AAT92717.1. BK006943 Genomic DNA. Translation: DAA08778.1.
PIR	S56787. S56788.
RefSeq	NP_012518.2. NM_001181450.1.
3D structure databases
ProteinModelPortal	P47072.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-4907N.
IntAct	P47072. 4 interactions.
MINT	MINT-1951256.
Proteomic databases
PaxDb	P47072.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	YJL016W; YJL016W; YJL016W.
GeneID	853436.
KEGG	sce:YJL016W.
Organism-specific databases
CYGD	YJL016w.
SGD	S000003553. YJL016W.
Phylogenomic databases
eggNOG	NOG87770.
GeneTree	ENSGT00530000068670.
OrthoDB	EOG4MSH7M.
Gene expression databases
Genevestigator	P47072.
GermOnline	YJL016W. Saccharomyces cerevisiae.
Family and domain databases
ProtoNet	Search...
Other
NextBio	973982.

Entry information

Entry name

YJB6_YEAST

Accession

Primary (citable) accession number: P47072
Secondary accession number(s): D6VWG2, P47071, Q86ZR5

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1996
Last sequence update:	March 7, 2006
Last modified:	April 3, 2013
This is version 86 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program