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P47010

- IRC9_YEAST

UniProt

P47010 - IRC9_YEAST

Protein

Putative uncharacterized protein IRC9

Gene

IRC9

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Feb 1996)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. mitotic recombination Source: SGD

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein IRC9
    Alternative name(s):
    Increased recombination centers protein 9
    Gene namesi
    Name:IRC9
    Ordered Locus Names:YJL142C
    ORF Names:J0650
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome X

    Organism-specific databases

    SGDiS000003678. IRC9.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 130130Putative uncharacterized protein IRC9PRO_0000203035Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP47010.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-5308N.
    IntActiP47010. 1 interaction.
    MINTiMINT-515270.
    STRINGi4932.YJL142C.

    Structurei

    3D structure databases

    ProteinModelPortaliP47010.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei25 – 4521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei50 – 7021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei83 – 10321HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    OrthoDBiEOG789CS6.

    Sequencei

    Sequence statusi: Complete.

    P47010-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTMQKASKVN MEVRTTLVTM QATTMSIILA LPLVVLIAST LVLSVKGRRI    50
    HLATSPIILL LLILFKKGQQ ARSINFTLSK NKSLFCLTFL NYPFHFITAW 100
    CHNDILNKYE FCLFLIFLIR IVITINKVTL 130
    Length:130
    Mass (Da):14,844
    Last modified:February 1, 1996 - v1
    Checksum:iBE43ACF3EF051D47
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X87371 Genomic DNA. Translation: CAA60813.1.
    Z49417 Genomic DNA. Translation: CAA89436.1.
    BK006943 Genomic DNA. No translation available.
    PIRiS55171.

    Genome annotation databases

    EnsemblFungiiYJL142C; YJL142C; YJL142C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X87371 Genomic DNA. Translation: CAA60813.1 .
    Z49417 Genomic DNA. Translation: CAA89436.1 .
    BK006943 Genomic DNA. No translation available.
    PIRi S55171.

    3D structure databases

    ProteinModelPortali P47010.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-5308N.
    IntActi P47010. 1 interaction.
    MINTi MINT-515270.
    STRINGi 4932.YJL142C.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YJL142C ; YJL142C ; YJL142C .

    Organism-specific databases

    SGDi S000003678. IRC9.

    Phylogenomic databases

    OrthoDBi EOG789CS6.

    Gene expression databases

    Genevestigatori P47010.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of a 40.7 kb segment from the left arm of yeast chromosome X reveals 14 known genes and 13 new open reading frames including homologues of genes clustered on the right arm of chromosome XI."
      Katsoulou C., Tzermia M., Tavernarakis N., Alexandraki D.
      Yeast 12:787-797(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 96604 / S288c / FY1679.
    2. "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
      Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K.
      , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.
      EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.

    Entry informationi

    Entry nameiIRC9_YEAST
    AccessioniPrimary (citable) accession number: P47010
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1996
    Last sequence update: February 1, 1996
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Caution

    Product of a dubious gene prediction. Partially overlaps YAK1.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome X
      Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

    External Data

    Dasty 3