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Protein

Putative uncharacterized protein IRC9

Gene

IRC9

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Biological processi

  • mitotic recombination Source: SGD
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein IRC9
Alternative name(s):
Increased recombination centers protein 9
Gene namesi
Name:IRC9
Ordered Locus Names:YJL142C
ORF Names:J0650
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome X

Organism-specific databases

SGDiS000003678. IRC9.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei25 – 45HelicalSequence analysisAdd BLAST21
Transmembranei50 – 70HelicalSequence analysisAdd BLAST21
Transmembranei83 – 103HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002030351 – 130Putative uncharacterized protein IRC9Add BLAST130

Proteomic databases

PRIDEiP47010.

Interactioni

Protein-protein interaction databases

DIPiDIP-5308N.
IntActiP47010. 1 interactor.
MINTiMINT-515270.

Structurei

3D structure databases

ProteinModelPortaliP47010.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiEOG092C67TB.

Sequencei

Sequence statusi: Complete.

P47010-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTMQKASKVN MEVRTTLVTM QATTMSIILA LPLVVLIAST LVLSVKGRRI
60 70 80 90 100
HLATSPIILL LLILFKKGQQ ARSINFTLSK NKSLFCLTFL NYPFHFITAW
110 120 130
CHNDILNKYE FCLFLIFLIR IVITINKVTL
Length:130
Mass (Da):14,844
Last modified:February 1, 1996 - v1
Checksum:iBE43ACF3EF051D47
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X87371 Genomic DNA. Translation: CAA60813.1.
Z49417 Genomic DNA. Translation: CAA89436.1.
BK006943 Genomic DNA. No translation available.
PIRiS55171.

Genome annotation databases

EnsemblFungiiYJL142C; YJL142C; YJL142C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X87371 Genomic DNA. Translation: CAA60813.1.
Z49417 Genomic DNA. Translation: CAA89436.1.
BK006943 Genomic DNA. No translation available.
PIRiS55171.

3D structure databases

ProteinModelPortaliP47010.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-5308N.
IntActiP47010. 1 interactor.
MINTiMINT-515270.

Proteomic databases

PRIDEiP47010.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYJL142C; YJL142C; YJL142C.

Organism-specific databases

SGDiS000003678. IRC9.

Phylogenomic databases

OrthoDBiEOG092C67TB.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiIRC9_YEAST
AccessioniPrimary (citable) accession number: P47010
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: November 2, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction. Partially overlaps YAK1.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome X
    Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.