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Protein

Uncharacterized oxidoreductase YhhX

Gene

yhhX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciEcoCyc:G7757-MONOMER.
ECOL316407:JW3403-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase YhhX (EC:1.-.-.-)
Gene namesi
Name:yhhX
Ordered Locus Names:b3440, JW3403
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12944. yhhX.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000917911 – 345Uncharacterized oxidoreductase YhhXAdd BLAST345

Proteomic databases

EPDiP46853.
PaxDbiP46853.
PRIDEiP46853.

Interactioni

Protein-protein interaction databases

BioGridi4262488. 12 interactors.
DIPiDIP-12357N.
IntActiP46853. 3 interactors.
STRINGi511145.b3440.

Structurei

Secondary structure

1345
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 8Combined sources6
Helixi12 – 17Combined sources6
Helixi19 – 22Combined sources4
Turni26 – 28Combined sources3
Beta strandi29 – 35Combined sources7
Helixi41 – 44Combined sources4
Helixi46 – 48Combined sources3
Beta strandi52 – 55Combined sources4
Helixi58 – 61Combined sources4
Beta strandi66 – 71Combined sources6
Helixi75 – 77Combined sources3
Helixi78 – 87Combined sources10
Beta strandi91 – 94Combined sources4
Beta strandi96 – 98Combined sources3
Helixi102 – 114Combined sources13
Beta strandi119 – 121Combined sources3
Helixi124 – 127Combined sources4
Helixi129 – 140Combined sources12
Beta strandi145 – 152Combined sources8
Helixi167 – 169Combined sources3
Helixi171 – 174Combined sources4
Helixi176 – 187Combined sources12
Beta strandi191 – 198Combined sources8
Beta strandi209 – 216Combined sources8
Beta strandi219 – 225Combined sources7
Beta strandi235 – 247Combined sources13
Helixi253 – 258Combined sources6
Turni266 – 269Combined sources4
Beta strandi275 – 280Combined sources6
Beta strandi286 – 291Combined sources6
Helixi300 – 311Combined sources12
Helixi319 – 331Combined sources13
Beta strandi334 – 342Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3F4LX-ray2.00A/B/C/D/E/F1-345[»]
ProteinModelPortaliP46853.
SMRiP46853.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP46853.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105D9R. Bacteria.
COG0673. LUCA.
HOGENOMiHOG000227438.
InParanoidiP46853.
OMAiYRRSAKP.
PhylomeDBiP46853.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

P46853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVINCAFIGF GKSTTRYHLP YVLNRKDSWH VAHIFRRHAK PEEQAPIYSH
60 70 80 90 100
IHFTSDLDEV LNDPDVKLVV VCTHADSHFE YAKRALEAGK NVLVEKPFTP
110 120 130 140 150
TLAQAKELFA LAKSKGLTVT PYQNRRFDSC FLTAKKAIES GKLGEIVEVE
160 170 180 190 200
SHFDYYRPVA ETKPGLPQDG AFYGLGVHTM DQIISLFGRP DHVAYDIRSL
210 220 230 240 250
RNKANPDDTF EAQLFYGDLK AIVKTSHLVK IDYPKFIVHG KKGSFIKYGI
260 270 280 290 300
DQQETSLKAN IMPGEPGFAA DDSVGVLEYV NDEGVTVREE MKPEMGDYGR
310 320 330 340
VYDALYQTIT HGAPNYVKES EVLTNLEILE RGFEQASPST VTLAK
Length:345
Mass (Da):38,765
Last modified:November 1, 1995 - v1
Checksum:i31D73A62511C7F68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58238.1.
U00096 Genomic DNA. Translation: AAC76465.1.
AP009048 Genomic DNA. Translation: BAE77853.1.
PIRiC65140.
RefSeqiNP_417897.1. NC_000913.3.
WP_000236293.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76465; AAC76465; b3440.
BAE77853; BAE77853; BAE77853.
GeneIDi947944.
KEGGiecj:JW3403.
eco:b3440.
PATRICi32122320. VBIEscCol129921_3537.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58238.1.
U00096 Genomic DNA. Translation: AAC76465.1.
AP009048 Genomic DNA. Translation: BAE77853.1.
PIRiC65140.
RefSeqiNP_417897.1. NC_000913.3.
WP_000236293.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3F4LX-ray2.00A/B/C/D/E/F1-345[»]
ProteinModelPortaliP46853.
SMRiP46853.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262488. 12 interactors.
DIPiDIP-12357N.
IntActiP46853. 3 interactors.
STRINGi511145.b3440.

Proteomic databases

EPDiP46853.
PaxDbiP46853.
PRIDEiP46853.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76465; AAC76465; b3440.
BAE77853; BAE77853; BAE77853.
GeneIDi947944.
KEGGiecj:JW3403.
eco:b3440.
PATRICi32122320. VBIEscCol129921_3537.

Organism-specific databases

EchoBASEiEB2778.
EcoGeneiEG12944. yhhX.

Phylogenomic databases

eggNOGiENOG4105D9R. Bacteria.
COG0673. LUCA.
HOGENOMiHOG000227438.
InParanoidiP46853.
OMAiYRRSAKP.
PhylomeDBiP46853.

Enzyme and pathway databases

BioCyciEcoCyc:G7757-MONOMER.
ECOL316407:JW3403-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP46853.
PROiP46853.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYHHX_ECOLI
AccessioniPrimary (citable) accession number: P46853
Secondary accession number(s): Q2M7A3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: November 2, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.