Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized oxidoreductase YhhX

Gene

yhhX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciEcoCyc:G7757-MONOMER.
ECOL316407:JW3403-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase YhhX (EC:1.-.-.-)
Gene namesi
Name:yhhX
Ordered Locus Names:b3440, JW3403
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12944. yhhX.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 345345Uncharacterized oxidoreductase YhhXPRO_0000091791Add
BLAST

Proteomic databases

EPDiP46853.
PaxDbiP46853.
PRIDEiP46853.

Interactioni

Protein-protein interaction databases

BioGridi4262488. 12 interactions.
DIPiDIP-12357N.
IntActiP46853. 3 interactions.
STRINGi511145.b3440.

Structurei

Secondary structure

1
345
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 86Combined sources
Helixi12 – 176Combined sources
Helixi19 – 224Combined sources
Turni26 – 283Combined sources
Beta strandi29 – 357Combined sources
Helixi41 – 444Combined sources
Helixi46 – 483Combined sources
Beta strandi52 – 554Combined sources
Helixi58 – 614Combined sources
Beta strandi66 – 716Combined sources
Helixi75 – 773Combined sources
Helixi78 – 8710Combined sources
Beta strandi91 – 944Combined sources
Beta strandi96 – 983Combined sources
Helixi102 – 11413Combined sources
Beta strandi119 – 1213Combined sources
Helixi124 – 1274Combined sources
Helixi129 – 14012Combined sources
Beta strandi145 – 1528Combined sources
Helixi167 – 1693Combined sources
Helixi171 – 1744Combined sources
Helixi176 – 18712Combined sources
Beta strandi191 – 1988Combined sources
Beta strandi209 – 2168Combined sources
Beta strandi219 – 2257Combined sources
Beta strandi235 – 24713Combined sources
Helixi253 – 2586Combined sources
Turni266 – 2694Combined sources
Beta strandi275 – 2806Combined sources
Beta strandi286 – 2916Combined sources
Helixi300 – 31112Combined sources
Helixi319 – 33113Combined sources
Beta strandi334 – 3429Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3F4LX-ray2.00A/B/C/D/E/F1-345[»]
ProteinModelPortaliP46853.
SMRiP46853. Positions 2-345.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP46853.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105D9R. Bacteria.
COG0673. LUCA.
HOGENOMiHOG000227438.
InParanoidiP46853.
OMAiYRRSAKP.
OrthoDBiEOG6423CS.
PhylomeDBiP46853.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

P46853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVINCAFIGF GKSTTRYHLP YVLNRKDSWH VAHIFRRHAK PEEQAPIYSH
60 70 80 90 100
IHFTSDLDEV LNDPDVKLVV VCTHADSHFE YAKRALEAGK NVLVEKPFTP
110 120 130 140 150
TLAQAKELFA LAKSKGLTVT PYQNRRFDSC FLTAKKAIES GKLGEIVEVE
160 170 180 190 200
SHFDYYRPVA ETKPGLPQDG AFYGLGVHTM DQIISLFGRP DHVAYDIRSL
210 220 230 240 250
RNKANPDDTF EAQLFYGDLK AIVKTSHLVK IDYPKFIVHG KKGSFIKYGI
260 270 280 290 300
DQQETSLKAN IMPGEPGFAA DDSVGVLEYV NDEGVTVREE MKPEMGDYGR
310 320 330 340
VYDALYQTIT HGAPNYVKES EVLTNLEILE RGFEQASPST VTLAK
Length:345
Mass (Da):38,765
Last modified:November 1, 1995 - v1
Checksum:i31D73A62511C7F68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58238.1.
U00096 Genomic DNA. Translation: AAC76465.1.
AP009048 Genomic DNA. Translation: BAE77853.1.
PIRiC65140.
RefSeqiNP_417897.1. NC_000913.3.
WP_000236293.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76465; AAC76465; b3440.
BAE77853; BAE77853; BAE77853.
GeneIDi947944.
KEGGiecj:JW3403.
eco:b3440.
PATRICi32122320. VBIEscCol129921_3537.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58238.1.
U00096 Genomic DNA. Translation: AAC76465.1.
AP009048 Genomic DNA. Translation: BAE77853.1.
PIRiC65140.
RefSeqiNP_417897.1. NC_000913.3.
WP_000236293.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3F4LX-ray2.00A/B/C/D/E/F1-345[»]
ProteinModelPortaliP46853.
SMRiP46853. Positions 2-345.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262488. 12 interactions.
DIPiDIP-12357N.
IntActiP46853. 3 interactions.
STRINGi511145.b3440.

Proteomic databases

EPDiP46853.
PaxDbiP46853.
PRIDEiP46853.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76465; AAC76465; b3440.
BAE77853; BAE77853; BAE77853.
GeneIDi947944.
KEGGiecj:JW3403.
eco:b3440.
PATRICi32122320. VBIEscCol129921_3537.

Organism-specific databases

EchoBASEiEB2778.
EcoGeneiEG12944. yhhX.

Phylogenomic databases

eggNOGiENOG4105D9R. Bacteria.
COG0673. LUCA.
HOGENOMiHOG000227438.
InParanoidiP46853.
OMAiYRRSAKP.
OrthoDBiEOG6423CS.
PhylomeDBiP46853.

Enzyme and pathway databases

BioCyciEcoCyc:G7757-MONOMER.
ECOL316407:JW3403-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP46853.
PROiP46853.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. "Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography."
    Fountoulakis M., Takacs M.-F., Berndt P., Langen H., Takacs B.
    Electrophoresis 20:2181-2195(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: B / BL21.

Entry informationi

Entry nameiYHHX_ECOLI
AccessioniPrimary (citable) accession number: P46853
Secondary accession number(s): Q2M7A3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: March 16, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.