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Protein

Protein GntX

Gene

gntX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Could be involved in gluconate metabolism.1 Publication

GO - Biological processi

  • deoxyribonucleoside catabolic process Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7747-MONOMER.
ECOL316407:JW5691-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein GntX
Gene namesi
Name:gntX
Synonyms:yhgH
Ordered Locus Names:b3413, JW5691
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12934. gntX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 227227Protein GntXPRO_0000209458Add
BLAST

Proteomic databases

PaxDbiP46846.

Interactioni

Protein-protein interaction databases

BioGridi4261222. 7 interactions.
STRINGi511145.b3413.

Structurei

3D structure databases

ProteinModelPortaliP46846.
SMRiP46846. Positions 183-224.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi8 – 5447Cys-richAdd
BLAST

Sequence similaritiesi

Belongs to the ComF/GntX family.Curated

Phylogenomic databases

eggNOGiENOG4105MJ2. Bacteria.
COG1040. LUCA.
HOGENOMiHOG000075042.
InParanoidiP46846.
OMAiLARWLGC.
OrthoDBiEOG6716R8.
PhylomeDBiP46846.

Family and domain databases

Gene3Di3.40.50.2020. 1 hit.
InterProiIPR005222. Competence_ComF.
IPR000836. PRibTrfase_dom.
IPR029057. PRTase-like.
[Graphical view]
PfamiPF00156. Pribosyltran. 1 hit.
[Graphical view]
SUPFAMiSSF53271. SSF53271. 1 hit.
TIGRFAMsiTIGR00201. comF. 1 hit.

Sequencei

Sequence statusi: Complete.

P46846-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTVPGLCWL CRMPLALGHW GICSVCSRAT RTDKTLCPQC GLPATHSHLP
60 70 80 90 100
CGRCLQKPPP WQRLVTVADY APPLSPLIHQ LKFSRRSEIA SALSRLLLLE
110 120 130 140 150
VLHARRTTGL QLPDRIVSVP LWQRRHWRRG FNQSDLLCQP LSRWLHCQWD
160 170 180 190 200
SEAVTRTRAT ATQHFLSARL RKRNLKNAFR LELPVQGRHM VIVDDVVTTG
210 220
STVAEIAQLL LRNGAAAVQV WCLCRTL
Length:227
Mass (Da):25,726
Last modified:July 15, 1999 - v2
Checksum:iBA8768610CDA03BE
GO

Sequence cautioni

The sequence AAA58211.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58211.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76438.2.
AP009048 Genomic DNA. Translation: BAE77878.1.
PIRiH65136.
RefSeqiNP_417872.2. NC_000913.3.
WP_001333371.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76438; AAC76438; b3413.
BAE77878; BAE77878; BAE77878.
GeneIDi947915.
KEGGiecj:JW5691.
eco:b3413.
PATRICi32122264. VBIEscCol129921_3509.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58211.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76438.2.
AP009048 Genomic DNA. Translation: BAE77878.1.
PIRiH65136.
RefSeqiNP_417872.2. NC_000913.3.
WP_001333371.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP46846.
SMRiP46846. Positions 183-224.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261222. 7 interactions.
STRINGi511145.b3413.

Proteomic databases

PaxDbiP46846.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76438; AAC76438; b3413.
BAE77878; BAE77878; BAE77878.
GeneIDi947915.
KEGGiecj:JW5691.
eco:b3413.
PATRICi32122264. VBIEscCol129921_3509.

Organism-specific databases

EchoBASEiEB2770.
EcoGeneiEG12934. gntX.

Phylogenomic databases

eggNOGiENOG4105MJ2. Bacteria.
COG1040. LUCA.
HOGENOMiHOG000075042.
InParanoidiP46846.
OMAiLARWLGC.
OrthoDBiEOG6716R8.
PhylomeDBiP46846.

Enzyme and pathway databases

BioCyciEcoCyc:G7747-MONOMER.
ECOL316407:JW5691-MONOMER.

Miscellaneous databases

PROiP46846.

Family and domain databases

Gene3Di3.40.50.2020. 1 hit.
InterProiIPR005222. Competence_ComF.
IPR000836. PRibTrfase_dom.
IPR029057. PRTase-like.
[Graphical view]
PfamiPF00156. Pribosyltran. 1 hit.
[Graphical view]
SUPFAMiSSF53271. SSF53271. 1 hit.
TIGRFAMsiTIGR00201. comF. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. "The gluconate high affinity transport of GntI in Escherichia coli involves a multicomponent complex system."
    Porco A., Alonso G., Isturiz T.
    J. Basic Microbiol. 38:395-404(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiGNTX_ECOLI
AccessioniPrimary (citable) accession number: P46846
Secondary accession number(s): Q2M778
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 15, 1999
Last modified: January 20, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.