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Protein

Homeobox-leucine zipper protein HAT3

Gene

HAT3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Probable transcription factor.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi159 – 218HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

  • sequence-specific DNA binding Source: InterPro
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox-leucine zipper protein HAT3
Alternative name(s):
Homeodomain-leucine zipper protein HAT3
Short name:
HD-ZIP protein 3
Gene namesi
Name:HAT3
Ordered Locus Names:At3g60390
ORF Names:T8B10_50
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G60390.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000489001 – 315Homeobox-leucine zipper protein HAT3Add BLAST315

Proteomic databases

PaxDbiP46602.
PRIDEiP46602.

Expressioni

Gene expression databases

GenevisibleiP46602. AT.

Interactioni

Protein-protein interaction databases

BioGridi10524. 5 interactors.
IntActiP46602. 5 interactors.
STRINGi3702.AT3G60390.1.

Structurei

3D structure databases

ProteinModelPortaliP46602.
SMRiP46602.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni226 – 247Leucine-zipperAdd BLAST22

Sequence similaritiesi

Contains 1 homeobox DNA-binding domain.PROSITE-ProRule annotation

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG0483. Eukaryota.
ENOG410Z2UE. LUCA.
HOGENOMiHOG000241612.
InParanoidiP46602.
KOiK09338.
OMAiGRRDEQY.
OrthoDBiEOG09360NWC.
PhylomeDBiP46602.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR006712. HD-ZIP_N.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF04618. HD-ZIP_N. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00340. HALZ. 1 hit.
SM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P46602-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSERDDGLGL SLSLSLGFNQ KDPSSRLNPM PLASYASSSH MQHMQQSNYN
60 70 80 90 100
HPQKIQNTWI NMFQSSERNS DMRSFLRGID VNRAPSTVVV DVEDEGAGVS
110 120 130 140 150
SPNSTVSSVM SGKKSERELM AAAGAVGGGR VEDNEIERAS CSLGGGSDDE
160 170 180 190 200
DGSGNGDDSS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKM ALAKQLNLRT
210 220 230 240 250
RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ENLTDENRRL QKEVSELRAL
260 270 280 290 300
KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN SSSPMGPMSP
310
WAAMPLRQRP AAGSH
Length:315
Mass (Da):34,747
Last modified:January 11, 2001 - v2
Checksum:iFDD35A6405CF9F01
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti212A → Q in AAA56904 (PubMed:7915839).Curated1
Sequence conflicti212A → Q in AAA56905 (PubMed:7915839).Curated1
Sequence conflicti281S → P in AAA56904 (PubMed:7915839).Curated1
Sequence conflicti281S → P in AAA56905 (PubMed:7915839).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U09338 mRNA. Translation: AAA56904.1.
U09339 Genomic DNA. Translation: AAA56905.1.
AJ440781 mRNA. Translation: CAD29465.1.
AL138646 Genomic DNA. Translation: CAB81825.1.
CP002686 Genomic DNA. Translation: AEE80054.1.
AY099565 mRNA. Translation: AAM20417.1.
BT008713 mRNA. Translation: AAP42726.1.
PIRiT47850.
T52350.
RefSeqiNP_191598.1. NM_115903.3.
UniGeneiAt.21112.

Genome annotation databases

EnsemblPlantsiAT3G60390.1; AT3G60390.1; AT3G60390.
GeneIDi825210.
GrameneiAT3G60390.1; AT3G60390.1; AT3G60390.
KEGGiath:AT3G60390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U09338 mRNA. Translation: AAA56904.1.
U09339 Genomic DNA. Translation: AAA56905.1.
AJ440781 mRNA. Translation: CAD29465.1.
AL138646 Genomic DNA. Translation: CAB81825.1.
CP002686 Genomic DNA. Translation: AEE80054.1.
AY099565 mRNA. Translation: AAM20417.1.
BT008713 mRNA. Translation: AAP42726.1.
PIRiT47850.
T52350.
RefSeqiNP_191598.1. NM_115903.3.
UniGeneiAt.21112.

3D structure databases

ProteinModelPortaliP46602.
SMRiP46602.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi10524. 5 interactors.
IntActiP46602. 5 interactors.
STRINGi3702.AT3G60390.1.

Proteomic databases

PaxDbiP46602.
PRIDEiP46602.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G60390.1; AT3G60390.1; AT3G60390.
GeneIDi825210.
GrameneiAT3G60390.1; AT3G60390.1; AT3G60390.
KEGGiath:AT3G60390.

Organism-specific databases

TAIRiAT3G60390.

Phylogenomic databases

eggNOGiKOG0483. Eukaryota.
ENOG410Z2UE. LUCA.
HOGENOMiHOG000241612.
InParanoidiP46602.
KOiK09338.
OMAiGRRDEQY.
OrthoDBiEOG09360NWC.
PhylomeDBiP46602.

Miscellaneous databases

PROiP46602.

Gene expression databases

GenevisibleiP46602. AT.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR006712. HD-ZIP_N.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF04618. HD-ZIP_N. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00340. HALZ. 1 hit.
SM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiHAT3_ARATH
AccessioniPrimary (citable) accession number: P46602
Secondary accession number(s): Q546G9, Q9M220
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: January 11, 2001
Last modified: November 30, 2016
This is version 118 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.