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Protein

Homeobox-leucine zipper protein HAT1

Gene

HAT1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Probable transcription factor.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi132 – 19160HomeoboxPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • protein self-association Source: TAIR
  • sequence-specific DNA binding Source: InterPro
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • developmental process involved in reproduction Source: TAIR
  • floral meristem determinacy Source: TAIR
  • fruit septum development Source: TAIR
  • gynoecium development Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox-leucine zipper protein HAT1
Alternative name(s):
Homeodomain-leucine zipper protein HAT1
Short name:
HD-ZIP protein 1
Gene namesi
Name:HAT1
Ordered Locus Names:At4g17460
ORF Names:dl4765w, FCAALL.65
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G17460.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 282282Homeobox-leucine zipper protein HAT1PRO_0000048898Add
BLAST

Proteomic databases

PaxDbiP46600.
PRIDEiP46600.

Expressioni

Gene expression databases

GenevisibleiP46600. AT.

Interactioni

GO - Molecular functioni

  • protein self-association Source: TAIR

Protein-protein interaction databases

BioGridi12750. 5 interactions.
STRINGi3702.AT4G17460.1.

Structurei

3D structure databases

ProteinModelPortaliP46600.
SMRiP46600. Positions 139-188.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni199 – 22022Leucine-zipperAdd
BLAST

Sequence similaritiesi

Contains 1 homeobox DNA-binding domain.PROSITE-ProRule annotation

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG0483. Eukaryota.
ENOG410Z2UE. LUCA.
HOGENOMiHOG000241612.
InParanoidiP46600.
KOiK09338.
OMAiGFAQTHH.
OrthoDBiEOG09360LF4.
PhylomeDBiP46600.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR006712. HD-ZIP_N.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF04618. HD-ZIP_N. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00031. HTHREPRESSR.
SMARTiSM00340. HALZ. 1 hit.
SM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P46600-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMMGKEDLGL SLSLGFAQNH PLQLNLKPTS SPMSNLQMFP WNQTLVSSSD
60 70 80 90 100
QQKQQFLRKI DVNSLPTTVD LEEETGVSSP NSTISSTVSG KRRSTEREGT
110 120 130 140 150
SGGGCGDDLD ITLDRSSSRG TSDEEEDYGG ETCRKKLRLS KDQSAVLEDT
160 170 180 190 200
FKEHNTLNPK QKLALAKKLG LTARQVEVWF QNRRARTKLK QTEVDCEYLK
210 220 230 240 250
RCVEKLTEEN RRLEKEAAEL RALKLSPRLY GQMSPPTTLL MCPSCERVAG
260 270 280
PSSSNHNQRS VSLSPWLQMA HGSTFDVMRP RS
Length:282
Mass (Da):31,555
Last modified:November 1, 1995 - v1
Checksum:i89423D2D00D9A34D
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti75 – 751T → I in AAM64872 (Ref. 7) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U09332 mRNA. Translation: AAA56898.1.
U09333 Genomic DNA. Translation: AAA56899.1.
AJ441252 mRNA. Translation: CAD29651.1.
Z97343 Genomic DNA. Translation: CAB10527.1.
AL161546 Genomic DNA. Translation: CAB78749.1.
CP002687 Genomic DNA. Translation: AEE83894.1.
BT005756 mRNA. Translation: AAO64161.1.
BT006112 mRNA. Translation: AAP04097.1.
AY087322 mRNA. Translation: AAM64872.1.
AK228587 mRNA. Translation: BAF00502.1.
PIRiB71444.
RefSeqiNP_193476.1. NM_117849.3.
UniGeneiAt.19738.

Genome annotation databases

EnsemblPlantsiAT4G17460.1; AT4G17460.1; AT4G17460.
GeneIDi827457.
GrameneiAT4G17460.1; AT4G17460.1; AT4G17460.
KEGGiath:AT4G17460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U09332 mRNA. Translation: AAA56898.1.
U09333 Genomic DNA. Translation: AAA56899.1.
AJ441252 mRNA. Translation: CAD29651.1.
Z97343 Genomic DNA. Translation: CAB10527.1.
AL161546 Genomic DNA. Translation: CAB78749.1.
CP002687 Genomic DNA. Translation: AEE83894.1.
BT005756 mRNA. Translation: AAO64161.1.
BT006112 mRNA. Translation: AAP04097.1.
AY087322 mRNA. Translation: AAM64872.1.
AK228587 mRNA. Translation: BAF00502.1.
PIRiB71444.
RefSeqiNP_193476.1. NM_117849.3.
UniGeneiAt.19738.

3D structure databases

ProteinModelPortaliP46600.
SMRiP46600. Positions 139-188.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi12750. 5 interactions.
STRINGi3702.AT4G17460.1.

Proteomic databases

PaxDbiP46600.
PRIDEiP46600.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G17460.1; AT4G17460.1; AT4G17460.
GeneIDi827457.
GrameneiAT4G17460.1; AT4G17460.1; AT4G17460.
KEGGiath:AT4G17460.

Organism-specific databases

TAIRiAT4G17460.

Phylogenomic databases

eggNOGiKOG0483. Eukaryota.
ENOG410Z2UE. LUCA.
HOGENOMiHOG000241612.
InParanoidiP46600.
KOiK09338.
OMAiGFAQTHH.
OrthoDBiEOG09360LF4.
PhylomeDBiP46600.

Miscellaneous databases

PROiP46600.

Gene expression databases

GenevisibleiP46600. AT.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR006712. HD-ZIP_N.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF04618. HD-ZIP_N. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00031. HTHREPRESSR.
SMARTiSM00340. HALZ. 1 hit.
SM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiHAT1_ARATH
AccessioniPrimary (citable) accession number: P46600
Secondary accession number(s): Q546G7, Q8LBA8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: September 7, 2016
This is version 127 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.