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P46504

- YLX8_CAEEL

UniProt

P46504 - YLX8_CAEEL

Protein

Uncharacterized protein F23F12.8

Gene

F23F12.8

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 2 (07 Feb 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. chitin binding Source: InterPro

    GO - Biological processi

    1. chitin metabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein F23F12.8
    Gene namesi
    ORF Names:F23F12.8
    OrganismiCaenorhabditis elegans
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome III

    Organism-specific databases

    WormBaseiF23F12.8; CE38952; WBGene00017754.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020Sequence AnalysisAdd
    BLAST
    Chaini21 – 980960Uncharacterized protein F23F12.8PRO_0000014281Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi187 – 1871N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi190 – 1901N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi941 – 9411N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi975 – 9751N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PaxDbiP46504.
    PRIDEiP46504.

    Interactioni

    Protein-protein interaction databases

    STRINGi6239.F23F12.8.

    Structurei

    3D structure databases

    ProteinModelPortaliP46504.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi310 – 618309Glu-richAdd
    BLAST

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG241959.
    HOGENOMiHOG000018743.
    InParanoidiP46504.
    OMAiSIGRCEK.
    OrthoDBiEOG7KH9PG.

    Family and domain databases

    InterProiIPR002557. Chitin-bd_dom.
    [Graphical view]
    SMARTiSM00494. ChtBD2. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P46504-1 [UniParc]FASTAAdd to Basket

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    MRTMHCFLFI LLFCLGQVFT DVIFTSERCN RVTYGLRTVN GDPSRYKQCG    50
    PSGRVWIVPC APQMTFDPED RVCKERLDSR IVKPMRKYET SRTIITTPAP 100
    IPSSYPVSAE VIAPGAPAAS HAAPEEFVFS TIRPKSRKPK AKTRGKFRKT 150
    TTAMIQTTTP MTVESFESME MTTTPKIVIF ASKKNMNNTN RSGESRTQLI 200
    RNRNRERGNA PAFTRPGRVR TTTPMSVTHA TRFVPGIQHK VTVAPKEVQG 250
    MPHTLAPYEK MDRRPDSFGV EELTTMTPEY TVRYNGQTMT ENEFLNQLLH 300
    IVQHQKTVSE RQQQEKFEKM EQERLRQEKE EKARELERRR KLEESETARQ 350
    AELDRQATIY AEQERMAMER NRELERIRLE EKKRENERVR QEEIAMEISK 400
    IRELERLQLE RQRKNERVRQ ELEAARKYKL QEEERQRKIQ QQKVEMEQIR 450
    QQEEARQEQL RVLEEERARE LERVRQEELE RQHQMEILRQ QEEDQKKKKL 500
    EKDREQREQQ EAEELNRMII EKEMKENKQK MIEEKNKRKM LEKEMEDRQN 550
    AIYEEEERRI AEEERRKQIE IEERRRIQQQ IMIATEERSR LDAMEREREM 600
    LRQIKESEKQ RKELERQELL ATTPITTIKP IYRPDISEYR PPDVESHMIR 650
    FTTQSPEWAT PSPTWNPAWN TVTAEEETPG IPIIHSQCQV NGECELKYDV 700
    DSFCAHPRSP SMYLQCAPLY GRLGRWTERY CPDTLIFIVS IGRCEKGEET 750
    RKPYDPDNRV VIPRLPSETS FVEWKGNRVI DHQLPTHISP PRVYPPVPET 800
    HQPQIYSTID QFPKDLLPKI PELATAEKTY AQQYQNHIHG SVVSGGHNHQ 850
    VVRPIAPTPT IAPNSNVPVS YQISQSQNSL STNSIKSEID LSHIHPLFPR 900
    VQPDFLSRML PSLNFKMHDE NSGAQSLGSV VKPVLKKIAL NQTEQFLDRL 950
    LADQKNDEKL RKETIDRLKS SNSDNITKKN 980
    Length:980
    Mass (Da):115,346
    Last modified:February 7, 2006 - v2
    Checksum:i36CD1D19DA10E6C0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO081210 Genomic DNA. Translation: CCD69927.1.
    PIRiG88484.
    H88484.
    RefSeqiNP_498427.2. NM_066026.2.
    UniGeneiCel.10576.

    Genome annotation databases

    EnsemblMetazoaiF23F12.8; F23F12.8; WBGene00017754.
    GeneIDi184907.
    KEGGicel:CELE_F23F12.8.
    UCSCiF23F12.8. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO081210 Genomic DNA. Translation: CCD69927.1 .
    PIRi G88484.
    H88484.
    RefSeqi NP_498427.2. NM_066026.2.
    UniGenei Cel.10576.

    3D structure databases

    ProteinModelPortali P46504.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 6239.F23F12.8.

    Proteomic databases

    PaxDbi P46504.
    PRIDEi P46504.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai F23F12.8 ; F23F12.8 ; WBGene00017754 .
    GeneIDi 184907.
    KEGGi cel:CELE_F23F12.8.
    UCSCi F23F12.8. c. elegans.

    Organism-specific databases

    CTDi 184907.
    WormBasei F23F12.8 ; CE38952 ; WBGene00017754 .

    Phylogenomic databases

    eggNOGi NOG241959.
    HOGENOMi HOG000018743.
    InParanoidi P46504.
    OMAi SIGRCEK.
    OrthoDBi EOG7KH9PG.

    Miscellaneous databases

    NextBioi 926362.

    Family and domain databases

    InterProi IPR002557. Chitin-bd_dom.
    [Graphical view ]
    SMARTi SM00494. ChtBD2. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.

    Entry informationi

    Entry nameiYLX8_CAEEL
    AccessioniPrimary (citable) accession number: P46504
    Secondary accession number(s): P46503, Q45EL6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 75 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Caenorhabditis elegans
      Caenorhabditis elegans: entries, gene names and cross-references to WormBase

    External Data

    Dasty 3