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P46504

- YLX8_CAEEL

UniProt

P46504 - YLX8_CAEEL

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Protein

Uncharacterized protein F23F12.8

Gene
F23F12.8
Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. chitin binding Source: InterPro

GO - Biological processi

  1. chitin metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein F23F12.8
Gene namesi
ORF Names:F23F12.8
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome III

Organism-specific databases

WormBaseiF23F12.8; CE38952; WBGene00017754.

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 Reviewed predictionAdd
BLAST
Chaini21 – 980960Uncharacterized protein F23F12.8PRO_0000014281Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi187 – 1871N-linked (GlcNAc...) Reviewed prediction
Glycosylationi190 – 1901N-linked (GlcNAc...) Reviewed prediction
Glycosylationi941 – 9411N-linked (GlcNAc...) Reviewed prediction
Glycosylationi975 – 9751N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiP46504.
PRIDEiP46504.

Interactioni

Protein-protein interaction databases

STRINGi6239.F23F12.8.

Structurei

3D structure databases

ProteinModelPortaliP46504.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi310 – 618309Glu-richAdd
BLAST

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG241959.
HOGENOMiHOG000018743.
InParanoidiP46504.
OMAiSIGRCEK.
OrthoDBiEOG7KH9PG.

Family and domain databases

InterProiIPR002557. Chitin-bd_dom.
[Graphical view]
SMARTiSM00494. ChtBD2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P46504-1 [UniParc]FASTAAdd to Basket

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MRTMHCFLFI LLFCLGQVFT DVIFTSERCN RVTYGLRTVN GDPSRYKQCG    50
PSGRVWIVPC APQMTFDPED RVCKERLDSR IVKPMRKYET SRTIITTPAP 100
IPSSYPVSAE VIAPGAPAAS HAAPEEFVFS TIRPKSRKPK AKTRGKFRKT 150
TTAMIQTTTP MTVESFESME MTTTPKIVIF ASKKNMNNTN RSGESRTQLI 200
RNRNRERGNA PAFTRPGRVR TTTPMSVTHA TRFVPGIQHK VTVAPKEVQG 250
MPHTLAPYEK MDRRPDSFGV EELTTMTPEY TVRYNGQTMT ENEFLNQLLH 300
IVQHQKTVSE RQQQEKFEKM EQERLRQEKE EKARELERRR KLEESETARQ 350
AELDRQATIY AEQERMAMER NRELERIRLE EKKRENERVR QEEIAMEISK 400
IRELERLQLE RQRKNERVRQ ELEAARKYKL QEEERQRKIQ QQKVEMEQIR 450
QQEEARQEQL RVLEEERARE LERVRQEELE RQHQMEILRQ QEEDQKKKKL 500
EKDREQREQQ EAEELNRMII EKEMKENKQK MIEEKNKRKM LEKEMEDRQN 550
AIYEEEERRI AEEERRKQIE IEERRRIQQQ IMIATEERSR LDAMEREREM 600
LRQIKESEKQ RKELERQELL ATTPITTIKP IYRPDISEYR PPDVESHMIR 650
FTTQSPEWAT PSPTWNPAWN TVTAEEETPG IPIIHSQCQV NGECELKYDV 700
DSFCAHPRSP SMYLQCAPLY GRLGRWTERY CPDTLIFIVS IGRCEKGEET 750
RKPYDPDNRV VIPRLPSETS FVEWKGNRVI DHQLPTHISP PRVYPPVPET 800
HQPQIYSTID QFPKDLLPKI PELATAEKTY AQQYQNHIHG SVVSGGHNHQ 850
VVRPIAPTPT IAPNSNVPVS YQISQSQNSL STNSIKSEID LSHIHPLFPR 900
VQPDFLSRML PSLNFKMHDE NSGAQSLGSV VKPVLKKIAL NQTEQFLDRL 950
LADQKNDEKL RKETIDRLKS SNSDNITKKN 980
Length:980
Mass (Da):115,346
Last modified:February 7, 2006 - v2
Checksum:i36CD1D19DA10E6C0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO081210 Genomic DNA. Translation: CCD69927.1.
PIRiG88484.
H88484.
RefSeqiNP_498427.2. NM_066026.2.
UniGeneiCel.10576.

Genome annotation databases

EnsemblMetazoaiF23F12.8; F23F12.8; WBGene00017754.
GeneIDi184907.
KEGGicel:CELE_F23F12.8.
UCSCiF23F12.8. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO081210 Genomic DNA. Translation: CCD69927.1 .
PIRi G88484.
H88484.
RefSeqi NP_498427.2. NM_066026.2.
UniGenei Cel.10576.

3D structure databases

ProteinModelPortali P46504.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 6239.F23F12.8.

Proteomic databases

PaxDbi P46504.
PRIDEi P46504.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai F23F12.8 ; F23F12.8 ; WBGene00017754 .
GeneIDi 184907.
KEGGi cel:CELE_F23F12.8.
UCSCi F23F12.8. c. elegans.

Organism-specific databases

CTDi 184907.
WormBasei F23F12.8 ; CE38952 ; WBGene00017754 .

Phylogenomic databases

eggNOGi NOG241959.
HOGENOMi HOG000018743.
InParanoidi P46504.
OMAi SIGRCEK.
OrthoDBi EOG7KH9PG.

Miscellaneous databases

NextBioi 926362.

Family and domain databases

InterProi IPR002557. Chitin-bd_dom.
[Graphical view ]
SMARTi SM00494. ChtBD2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiYLX8_CAEEL
AccessioniPrimary (citable) accession number: P46504
Secondary accession number(s): P46503, Q45EL6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: February 7, 2006
Last modified: June 11, 2014
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase

External Data

Dasty 3

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