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Protein

Uncharacterized protein F23F12.8

Gene

F23F12.8

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein F23F12.8
Gene namesi
ORF Names:F23F12.8
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiF23F12.8; CE38952; WBGene00017754.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_000001428121 – 980Uncharacterized protein F23F12.8Add BLAST960

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi187N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi190N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi941N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi975N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

EPDiP46504.
PaxDbiP46504.
PRIDEiP46504.

Expressioni

Gene expression databases

BgeeiWBGene00017754.

Structurei

3D structure databases

ProteinModelPortaliP46504.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi310 – 618Glu-richAdd BLAST309

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410K78F. Eukaryota.
ENOG410ZPEV. LUCA.
HOGENOMiHOG000018743.
InParanoidiP46504.
OMAiSIGRCEK.
OrthoDBiEOG091G06A0.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
InterProiView protein in InterPro
IPR036508. Chitin-bd_dom_sf.
IPR035529. DUF5401.
PfamiView protein in Pfam
PF17380. DUF5401. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P46504-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTMHCFLFI LLFCLGQVFT DVIFTSERCN RVTYGLRTVN GDPSRYKQCG
60 70 80 90 100
PSGRVWIVPC APQMTFDPED RVCKERLDSR IVKPMRKYET SRTIITTPAP
110 120 130 140 150
IPSSYPVSAE VIAPGAPAAS HAAPEEFVFS TIRPKSRKPK AKTRGKFRKT
160 170 180 190 200
TTAMIQTTTP MTVESFESME MTTTPKIVIF ASKKNMNNTN RSGESRTQLI
210 220 230 240 250
RNRNRERGNA PAFTRPGRVR TTTPMSVTHA TRFVPGIQHK VTVAPKEVQG
260 270 280 290 300
MPHTLAPYEK MDRRPDSFGV EELTTMTPEY TVRYNGQTMT ENEFLNQLLH
310 320 330 340 350
IVQHQKTVSE RQQQEKFEKM EQERLRQEKE EKARELERRR KLEESETARQ
360 370 380 390 400
AELDRQATIY AEQERMAMER NRELERIRLE EKKRENERVR QEEIAMEISK
410 420 430 440 450
IRELERLQLE RQRKNERVRQ ELEAARKYKL QEEERQRKIQ QQKVEMEQIR
460 470 480 490 500
QQEEARQEQL RVLEEERARE LERVRQEELE RQHQMEILRQ QEEDQKKKKL
510 520 530 540 550
EKDREQREQQ EAEELNRMII EKEMKENKQK MIEEKNKRKM LEKEMEDRQN
560 570 580 590 600
AIYEEEERRI AEEERRKQIE IEERRRIQQQ IMIATEERSR LDAMEREREM
610 620 630 640 650
LRQIKESEKQ RKELERQELL ATTPITTIKP IYRPDISEYR PPDVESHMIR
660 670 680 690 700
FTTQSPEWAT PSPTWNPAWN TVTAEEETPG IPIIHSQCQV NGECELKYDV
710 720 730 740 750
DSFCAHPRSP SMYLQCAPLY GRLGRWTERY CPDTLIFIVS IGRCEKGEET
760 770 780 790 800
RKPYDPDNRV VIPRLPSETS FVEWKGNRVI DHQLPTHISP PRVYPPVPET
810 820 830 840 850
HQPQIYSTID QFPKDLLPKI PELATAEKTY AQQYQNHIHG SVVSGGHNHQ
860 870 880 890 900
VVRPIAPTPT IAPNSNVPVS YQISQSQNSL STNSIKSEID LSHIHPLFPR
910 920 930 940 950
VQPDFLSRML PSLNFKMHDE NSGAQSLGSV VKPVLKKIAL NQTEQFLDRL
960 970 980
LADQKNDEKL RKETIDRLKS SNSDNITKKN
Length:980
Mass (Da):115,346
Last modified:February 7, 2006 - v2
Checksum:i36CD1D19DA10E6C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081210 Genomic DNA. Translation: CCD69927.1.
PIRiG88484.
H88484.
RefSeqiNP_498427.2. NM_066026.2.
UniGeneiCel.10576.

Genome annotation databases

EnsemblMetazoaiF23F12.8; F23F12.8; WBGene00017754.
GeneIDi184907.
KEGGicel:CELE_F23F12.8.
UCSCiF23F12.8. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiYLX8_CAEEL
AccessioniPrimary (citable) accession number: P46504
Secondary accession number(s): P46503, Q45EL6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: February 7, 2006
Last modified: October 25, 2017
This is version 91 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase