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P46504 (YLX8_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein F23F12.8
Gene names
ORF Names:F23F12.8
OrganismCaenorhabditis elegans [Reference proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length980 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchitin metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular_functionchitin binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential
Chain21 – 980960Uncharacterized protein F23F12.8
PRO_0000014281

Regions

Compositional bias310 – 618309Glu-rich

Amino acid modifications

Glycosylation1871N-linked (GlcNAc...) Potential
Glycosylation1901N-linked (GlcNAc...) Potential
Glycosylation9411N-linked (GlcNAc...) Potential
Glycosylation9751N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
P46504 [UniParc].

Last modified February 7, 2006. Version 2.
Checksum: 36CD1D19DA10E6C0

FASTA980115,346
        10         20         30         40         50         60 
MRTMHCFLFI LLFCLGQVFT DVIFTSERCN RVTYGLRTVN GDPSRYKQCG PSGRVWIVPC 

        70         80         90        100        110        120 
APQMTFDPED RVCKERLDSR IVKPMRKYET SRTIITTPAP IPSSYPVSAE VIAPGAPAAS 

       130        140        150        160        170        180 
HAAPEEFVFS TIRPKSRKPK AKTRGKFRKT TTAMIQTTTP MTVESFESME MTTTPKIVIF 

       190        200        210        220        230        240 
ASKKNMNNTN RSGESRTQLI RNRNRERGNA PAFTRPGRVR TTTPMSVTHA TRFVPGIQHK 

       250        260        270        280        290        300 
VTVAPKEVQG MPHTLAPYEK MDRRPDSFGV EELTTMTPEY TVRYNGQTMT ENEFLNQLLH 

       310        320        330        340        350        360 
IVQHQKTVSE RQQQEKFEKM EQERLRQEKE EKARELERRR KLEESETARQ AELDRQATIY 

       370        380        390        400        410        420 
AEQERMAMER NRELERIRLE EKKRENERVR QEEIAMEISK IRELERLQLE RQRKNERVRQ 

       430        440        450        460        470        480 
ELEAARKYKL QEEERQRKIQ QQKVEMEQIR QQEEARQEQL RVLEEERARE LERVRQEELE 

       490        500        510        520        530        540 
RQHQMEILRQ QEEDQKKKKL EKDREQREQQ EAEELNRMII EKEMKENKQK MIEEKNKRKM 

       550        560        570        580        590        600 
LEKEMEDRQN AIYEEEERRI AEEERRKQIE IEERRRIQQQ IMIATEERSR LDAMEREREM 

       610        620        630        640        650        660 
LRQIKESEKQ RKELERQELL ATTPITTIKP IYRPDISEYR PPDVESHMIR FTTQSPEWAT 

       670        680        690        700        710        720 
PSPTWNPAWN TVTAEEETPG IPIIHSQCQV NGECELKYDV DSFCAHPRSP SMYLQCAPLY 

       730        740        750        760        770        780 
GRLGRWTERY CPDTLIFIVS IGRCEKGEET RKPYDPDNRV VIPRLPSETS FVEWKGNRVI 

       790        800        810        820        830        840 
DHQLPTHISP PRVYPPVPET HQPQIYSTID QFPKDLLPKI PELATAEKTY AQQYQNHIHG 

       850        860        870        880        890        900 
SVVSGGHNHQ VVRPIAPTPT IAPNSNVPVS YQISQSQNSL STNSIKSEID LSHIHPLFPR 

       910        920        930        940        950        960 
VQPDFLSRML PSLNFKMHDE NSGAQSLGSV VKPVLKKIAL NQTEQFLDRL LADQKNDEKL 

       970        980 
RKETIDRLKS SNSDNITKKN 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO081210 Genomic DNA. Translation: CCD69927.1.
PIRG88484.
H88484.
RefSeqNP_498427.2. NM_066026.2.
UniGeneCel.10576.

3D structure databases

ProteinModelPortalP46504.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING6239.F23F12.8.

Proteomic databases

PaxDbP46504.
PRIDEP46504.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaF23F12.8; F23F12.8; F23F12.8.
GeneID184907.
KEGGcel:CELE_F23F12.8.
UCSCF23F12.8. c. elegans.

Organism-specific databases

CTD184907.
WormBaseF23F12.8; CE38952; WBGene00017754.

Phylogenomic databases

eggNOGNOG241959.
HOGENOMHOG000018743.
InParanoidP46504.
OMASIGRCEK.
OrthoDBEOG7KH9PG.

Family and domain databases

InterProIPR002557. Chitin-bd_dom.
[Graphical view]
SMARTSM00494. ChtBD2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio926362.

Entry information

Entry nameYLX8_CAEEL
AccessionPrimary (citable) accession number: P46504
Secondary accession number(s): P46503, Q45EL6
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: February 7, 2006
Last modified: November 13, 2013
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormBase