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Protein

Uncharacterized protein F23F12.8

Gene

F23F12.8

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. chitin binding Source: InterPro

GO - Biological processi

  1. chitin metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein F23F12.8
Gene namesi
ORF Names:F23F12.8
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome III

Organism-specific databases

WormBaseiF23F12.8; CE38952; WBGene00017754.

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence AnalysisAdd
BLAST
Chaini21 – 980960Uncharacterized protein F23F12.8PRO_0000014281Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi187 – 1871N-linked (GlcNAc...)Sequence Analysis
Glycosylationi190 – 1901N-linked (GlcNAc...)Sequence Analysis
Glycosylationi941 – 9411N-linked (GlcNAc...)Sequence Analysis
Glycosylationi975 – 9751N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiP46504.
PRIDEiP46504.

Interactioni

Protein-protein interaction databases

STRINGi6239.F23F12.8.

Structurei

3D structure databases

ProteinModelPortaliP46504.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi310 – 618309Glu-richAdd
BLAST

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG241959.
HOGENOMiHOG000018743.
InParanoidiP46504.
OMAiSIGRCEK.
OrthoDBiEOG7KH9PG.

Family and domain databases

InterProiIPR002557. Chitin-bd_dom.
[Graphical view]
SMARTiSM00494. ChtBD2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P46504-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRTMHCFLFI LLFCLGQVFT DVIFTSERCN RVTYGLRTVN GDPSRYKQCG
60 70 80 90 100
PSGRVWIVPC APQMTFDPED RVCKERLDSR IVKPMRKYET SRTIITTPAP
110 120 130 140 150
IPSSYPVSAE VIAPGAPAAS HAAPEEFVFS TIRPKSRKPK AKTRGKFRKT
160 170 180 190 200
TTAMIQTTTP MTVESFESME MTTTPKIVIF ASKKNMNNTN RSGESRTQLI
210 220 230 240 250
RNRNRERGNA PAFTRPGRVR TTTPMSVTHA TRFVPGIQHK VTVAPKEVQG
260 270 280 290 300
MPHTLAPYEK MDRRPDSFGV EELTTMTPEY TVRYNGQTMT ENEFLNQLLH
310 320 330 340 350
IVQHQKTVSE RQQQEKFEKM EQERLRQEKE EKARELERRR KLEESETARQ
360 370 380 390 400
AELDRQATIY AEQERMAMER NRELERIRLE EKKRENERVR QEEIAMEISK
410 420 430 440 450
IRELERLQLE RQRKNERVRQ ELEAARKYKL QEEERQRKIQ QQKVEMEQIR
460 470 480 490 500
QQEEARQEQL RVLEEERARE LERVRQEELE RQHQMEILRQ QEEDQKKKKL
510 520 530 540 550
EKDREQREQQ EAEELNRMII EKEMKENKQK MIEEKNKRKM LEKEMEDRQN
560 570 580 590 600
AIYEEEERRI AEEERRKQIE IEERRRIQQQ IMIATEERSR LDAMEREREM
610 620 630 640 650
LRQIKESEKQ RKELERQELL ATTPITTIKP IYRPDISEYR PPDVESHMIR
660 670 680 690 700
FTTQSPEWAT PSPTWNPAWN TVTAEEETPG IPIIHSQCQV NGECELKYDV
710 720 730 740 750
DSFCAHPRSP SMYLQCAPLY GRLGRWTERY CPDTLIFIVS IGRCEKGEET
760 770 780 790 800
RKPYDPDNRV VIPRLPSETS FVEWKGNRVI DHQLPTHISP PRVYPPVPET
810 820 830 840 850
HQPQIYSTID QFPKDLLPKI PELATAEKTY AQQYQNHIHG SVVSGGHNHQ
860 870 880 890 900
VVRPIAPTPT IAPNSNVPVS YQISQSQNSL STNSIKSEID LSHIHPLFPR
910 920 930 940 950
VQPDFLSRML PSLNFKMHDE NSGAQSLGSV VKPVLKKIAL NQTEQFLDRL
960 970 980
LADQKNDEKL RKETIDRLKS SNSDNITKKN
Length:980
Mass (Da):115,346
Last modified:February 7, 2006 - v2
Checksum:i36CD1D19DA10E6C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081210 Genomic DNA. Translation: CCD69927.1.
PIRiG88484.
H88484.
RefSeqiNP_498427.2. NM_066026.2.
UniGeneiCel.10576.

Genome annotation databases

EnsemblMetazoaiF23F12.8; F23F12.8; WBGene00017754.
GeneIDi184907.
KEGGicel:CELE_F23F12.8.
UCSCiF23F12.8. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081210 Genomic DNA. Translation: CCD69927.1.
PIRiG88484.
H88484.
RefSeqiNP_498427.2. NM_066026.2.
UniGeneiCel.10576.

3D structure databases

ProteinModelPortaliP46504.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F23F12.8.

Proteomic databases

PaxDbiP46504.
PRIDEiP46504.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF23F12.8; F23F12.8; WBGene00017754.
GeneIDi184907.
KEGGicel:CELE_F23F12.8.
UCSCiF23F12.8. c. elegans.

Organism-specific databases

CTDi184907.
WormBaseiF23F12.8; CE38952; WBGene00017754.

Phylogenomic databases

eggNOGiNOG241959.
HOGENOMiHOG000018743.
InParanoidiP46504.
OMAiSIGRCEK.
OrthoDBiEOG7KH9PG.

Miscellaneous databases

NextBioi926362.

Family and domain databases

InterProiIPR002557. Chitin-bd_dom.
[Graphical view]
SMARTiSM00494. ChtBD2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiYLX8_CAEEL
AccessioniPrimary (citable) accession number: P46504
Secondary accession number(s): P46503, Q45EL6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: February 7, 2006
Last modified: January 7, 2015
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.