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Protein

Ribosome-associated protein L7Ae-like

Gene

rplGB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

RNA-binding protein that recognizes the K-turn motif present in ribosomal RNA, but also in box C/D and box C'/D' sRNAs.1 Publication

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU01090-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome-associated protein L7Ae-like
Gene namesi
Name:rplGB
Synonyms:ybaB, ybxF
Ordered Locus Names:BSU01090
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm
  • Note: Localizes to the cell pole in exponential growth.

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

Pathology & Biotechi

Disruption phenotypei

None; has no effect on viability, growth or sporulation at low, normal or elevated temperatures.1 Publication

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Mutagenesisi17K → A: No effect. 1 Publication1
Mutagenesisi21K → A: No effect. 1 Publication1
Mutagenesisi24K → A: Decreased ribosomal association. 1 Publication1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001368121 – 82Ribosome-associated protein L7Ae-likeAdd BLAST82

Proteomic databases

PaxDbiP46350.

Interactioni

Subunit structurei

Found associated with the 50S subunit of the ribosome during exponential growth but not during stationary phase.2 Publications

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100000565.

Structurei

Secondary structure

182
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 8Combined sources6
Beta strandi10 – 15Combined sources6
Helixi16 – 23Combined sources8
Turni24 – 26Combined sources3
Beta strandi28 – 34Combined sources7
Helixi39 – 52Combined sources14
Beta strandi56 – 60Combined sources5
Helixi62 – 68Combined sources7
Beta strandi76 – 81Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3V7EX-ray2.80A/B2-82[»]
4LCKX-ray3.20A/D2-82[»]
4TZPX-ray8.50A/D2-82[»]
4TZVX-ray5.03A2-82[»]
4TZWX-ray4.67A2-82[»]
4TZZX-ray3.64A/D/G/J2-82[»]
ProteinModelPortaliP46350.
SMRiP46350.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL8 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105XPM. Bacteria.
COG1358. LUCA.
HOGENOMiHOG000055225.
InParanoidiP46350.
KOiK07590.
OMAiYIDTMKE.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00574. Ribosomal_L7Ae_Bact. 1 hit.
InterProiView protein in InterPro
IPR029064. L30e-like.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
IPR000948. Ribosomal_L7Ae_prok.
IPR023460. Ribosomal_L7Ae_putative.
PfamiView protein in Pfam
PF01248. Ribosomal_L7Ae. 1 hit.
PRINTSiPR00884. RIBOSOMALHS6.
SUPFAMiSSF55315. SSF55315. 1 hit.

Sequencei

Sequence statusi: Complete.

P46350-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYDKVSQAK SIIIGTKQTV KALKRGSVKE VVVAKDADPI LTSSVVSLAE
60 70 80
DQGISVSMVE SMKKLGKACG IEVGAAAVAI IL
Length:82
Mass (Da):8,462
Last modified:July 26, 2002 - v3
Checksum:iB8E301C141E77211
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L43593 Genomic DNA. Translation: AAB59113.1.
D64127 Genomic DNA. Translation: BAA11000.1.
AL009126 Genomic DNA. Translation: CAB11885.1.
PIRiG69751.
RefSeqiNP_387990.1. NC_000964.3.
WP_003225778.1. NZ_JNCM01000029.1.

Genome annotation databases

EnsemblBacteriaiCAB11885; CAB11885; BSU01090.
GeneIDi936829.
KEGGibsu:BSU01090.
PATRICifig|224308.179.peg.112.

Similar proteinsi

Entry informationi

Entry nameiRXL7_BACSU
AccessioniPrimary (citable) accession number: P46350
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 26, 2002
Last modified: October 25, 2017
This is version 119 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families