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Protein

Probable metabolite transport protein CsbC

Gene

csbC

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Could serve either a nutritional or an osmotic protection function.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciBSUB:BSU39810-MONOMER.

Protein family/group databases

TCDBi2.A.1.1.106. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Probable metabolite transport protein CsbC
Gene namesi
Name:csbC
Synonyms:yxcC
Ordered Locus Names:BSU39810
ORF Names:SS92BR
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1414CytoplasmicSequence analysisAdd
BLAST
Transmembranei15 – 3521Helical; Name=1Sequence analysisAdd
BLAST
Topological domaini36 – 383ExtracellularSequence analysis
Transmembranei39 – 5921Helical; Name=2Sequence analysisAdd
BLAST
Topological domaini60 – 7617CytoplasmicSequence analysisAdd
BLAST
Transmembranei77 – 9721Helical; Name=3Sequence analysisAdd
BLAST
Topological domaini98 – 1047ExtracellularSequence analysis
Transmembranei105 – 12521Helical; Name=4Sequence analysisAdd
BLAST
Topological domaini126 – 13914CytoplasmicSequence analysisAdd
BLAST
Transmembranei140 – 16021Helical; Name=5Sequence analysisAdd
BLAST
Topological domaini161 – 1633ExtracellularSequence analysis
Transmembranei164 – 18421Helical; Name=6Sequence analysisAdd
BLAST
Topological domaini185 – 24157CytoplasmicSequence analysisAdd
BLAST
Transmembranei242 – 26221Helical; Name=7Sequence analysisAdd
BLAST
Topological domaini263 – 28018ExtracellularSequence analysisAdd
BLAST
Transmembranei281 – 30121Helical; Name=8Sequence analysisAdd
BLAST
Topological domaini302 – 3087CytoplasmicSequence analysis
Transmembranei309 – 32921Helical; Name=9Sequence analysisAdd
BLAST
Topological domaini330 – 34112ExtracellularSequence analysisAdd
BLAST
Transmembranei342 – 36221Helical; Name=10Sequence analysisAdd
BLAST
Topological domaini363 – 37816CytoplasmicSequence analysisAdd
BLAST
Transmembranei379 – 39921Helical; Name=11Sequence analysisAdd
BLAST
Topological domaini400 – 4023ExtracellularSequence analysis
Transmembranei403 – 42321Helical; Name=12Sequence analysisAdd
BLAST
Topological domaini424 – 46138CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 461461Probable metabolite transport protein CsbCPRO_0000050303Add
BLAST

Proteomic databases

PaxDbiP46333.

Interactioni

Protein-protein interaction databases

IntActiP46333. 12 interactions.
STRINGi224308.Bsubs1_010100021471.

Structurei

3D structure databases

ProteinModelPortaliP46333.
SMRiP46333. Positions 358-423.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107QNK. Bacteria.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiP46333.
OMAiIMNITHD.
OrthoDBiEOG62RS8B.
PhylomeDBiP46333.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 2 hits.
PS00217. SUGAR_TRANSPORT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P46333-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKDTRKYMI YFFGALGGLL YGYDTGVISG ALLFINNDIP LTTLTEGLVV
60 70 80 90 100
SMLLLGAIFG SALSGTCSDR WGRRKVVFVL SIIFIIGALA CAFSQTIGML
110 120 130 140 150
IASRVILGLA VGGSTALVPV YLSEMAPTKI RGTLGTMNNL MIVTGILLAY
160 170 180 190 200
IVNYLFTPFE AWRWMVGLAA VPAVLLLIGI AFMPESPRWL VKRGSEEEAR
210 220 230 240 250
RIMNITHDPK DIEMELAEMK QGEAEKKETT LGVLKAKWIR PMLLIGVGLA
260 270 280 290 300
IFQQAVGINT VIYYAPTIFT KAGLGTSASA LGTMGIGILN VIMCITAMIL
310 320 330 340 350
IDRVGRKKLL IWGSVGITLS LAALSGVLLT LGLSASTAWM TVVFLGVYIV
360 370 380 390 400
FYQATWGPVV WVLMPELFPS KARGAATGFT TLVLSAANLI VSLVFPLMLS
410 420 430 440 450
AMGIAWVFMV FSVICLLSFF FAFYMVPETK GKSLEEIEAS LKKRFKKKKS
460
TQNQVLNERT L
Length:461
Mass (Da):50,140
Last modified:August 4, 2003 - v3
Checksum:iAD59CB5DD6372FE0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti400 – 4012SA → RP in BAA21604 (PubMed:7584049).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB005554 Genomic DNA. Translation: BAA21604.1.
AL009126 Genomic DNA. Translation: CAB16017.1.
PIRiD70073.
RefSeqiNP_391860.1. NC_000964.3.
WP_003244055.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB16017; CAB16017; BSU39810.
GeneIDi937639.
KEGGibsu:BSU39810.
PATRICi18980030. VBIBacSub10457_4177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB005554 Genomic DNA. Translation: BAA21604.1.
AL009126 Genomic DNA. Translation: CAB16017.1.
PIRiD70073.
RefSeqiNP_391860.1. NC_000964.3.
WP_003244055.1. NZ_JNCM01000034.1.

3D structure databases

ProteinModelPortaliP46333.
SMRiP46333. Positions 358-423.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP46333. 12 interactions.
STRINGi224308.Bsubs1_010100021471.

Protein family/group databases

TCDBi2.A.1.1.106. the major facilitator superfamily (mfs).

Proteomic databases

PaxDbiP46333.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB16017; CAB16017; BSU39810.
GeneIDi937639.
KEGGibsu:BSU39810.
PATRICi18980030. VBIBacSub10457_4177.

Phylogenomic databases

eggNOGiENOG4107QNK. Bacteria.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiP46333.
OMAiIMNITHD.
OrthoDBiEOG62RS8B.
PhylomeDBiP46333.

Enzyme and pathway databases

BioCyciBSUB:BSU39810-MONOMER.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 2 hits.
PS00217. SUGAR_TRANSPORT_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and sequencing of a 36-kb region of the Bacillus subtilis genome between the gnt and iol operons."
    Yoshida K., Seki S., Fujimura M., Miwa Y., Fujita Y.
    DNA Res. 2:61-69(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / BGSC1A1.
  2. Fujita Y., Shibayama T., Ishio I., Aoyama D., Yoshida K.
    Submitted (JUN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  4. "Two genes from Bacillus subtilis under the sole control of the general stress transcription factor sigmaB."
    Akbar S., Lee S.Y., Boylan S.A., Price C.W.
    Microbiology 145:1069-1078(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: CHARACTERIZATION.

Entry informationi

Entry nameiCSBC_BACSU
AccessioniPrimary (citable) accession number: P46333
Secondary accession number(s): O32289
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: August 4, 2003
Last modified: February 17, 2016
This is version 110 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.