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P46246

- RL20_BUCAP

UniProt

P46246 - RL20_BUCAP

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Protein

50S ribosomal protein L20

Gene

rplT

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity.By similarity

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-130-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L20
Gene namesi
Name:rplT
Ordered Locus Names:BUsg_120
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 11811750S ribosomal protein L20PRO_0000177133Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg120.

Structurei

3D structure databases

ProteinModelPortaliP46246.
SMRiP46246. Positions 2-117.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L20P family.Curated

Phylogenomic databases

eggNOGiCOG0292.
KOiK02887.
OMAiINAEARN.
OrthoDBiEOG6CGCMB.

Family and domain databases

HAMAPiMF_00382. Ribosomal_L20.
InterProiIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERiPTHR10986. PTHR10986. 1 hit.
PfamiPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSiPR00062. RIBOSOMALL20.
TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P46246-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARVKRGVTA HARHKKVLKQ AKGYYGARSR IYRVACQAVI KAGQYAYRDR
60 70 80 90 100
RQRKRQFRQL WITRINAAVR QSQMSYSSFM YGLKKASINI DRKILSDIAI
110
FDGFSFNILI KKAKEALL
Length:118
Mass (Da):13,758
Last modified:January 23, 2007 - v3
Checksum:i64C38C0FA9AF0D24
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67688.1.
U11066 Genomic DNA. Translation: AAC43608.1.
PIRiI40074.
RefSeqiNP_660477.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67688; AAM67688; BUsg_120.
GeneIDi1005937.
KEGGibas:BUsg120.
PATRICi21247021. VBIBucAph100086_0124.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67688.1 .
U11066 Genomic DNA. Translation: AAC43608.1 .
PIRi I40074.
RefSeqi NP_660477.1. NC_004061.1.

3D structure databases

ProteinModelPortali P46246.
SMRi P46246. Positions 2-117.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 198804.BUsg120.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM67688 ; AAM67688 ; BUsg_120 .
GeneIDi 1005937.
KEGGi bas:BUsg120.
PATRICi 21247021. VBIBucAph100086_0124.

Phylogenomic databases

eggNOGi COG0292.
KOi K02887.
OMAi INAEARN.
OrthoDBi EOG6CGCMB.

Enzyme and pathway databases

BioCyci BAPH198804:GHMG-130-MONOMER.

Family and domain databases

HAMAPi MF_00382. Ribosomal_L20.
InterProi IPR005813. Ribosomal_L20.
[Graphical view ]
PANTHERi PTHR10986. PTHR10986. 1 hit.
Pfami PF00453. Ribosomal_L20. 1 hit.
[Graphical view ]
PRINTSi PR00062. RIBOSOMALL20.
TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.
  2. "Aromatic amino acid biosynthesis in Buchnera aphidicola (endosymbiont of aphids): cloning and sequencing of a DNA fragment containing aroH-thrS-infC-rpmI-rplT."
    Kolibachuk D., Rouhbakhsh D., Baumann P.
    Curr. Microbiol. 30:313-316(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-27.

Entry informationi

Entry nameiRL20_BUCAP
AccessioniPrimary (citable) accession number: P46246
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: January 23, 2007
Last modified: October 29, 2014
This is version 96 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3