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Protein

50S ribosomal protein L20

Gene

rplT

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L20
Gene namesi
Name:rplT
Ordered Locus Names:BUsg_120
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaeBuchnera
Proteomesi
  • UP000000416 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001771332 – 11850S ribosomal protein L20Add BLAST117

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg120.

Structurei

3D structure databases

ProteinModelPortaliP46246.
SMRiP46246.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108YZX. Bacteria.
COG0292. LUCA.
KOiK02887.
OMAiDLAMNHP.
OrthoDBiPOG091H01B4.

Family and domain databases

CDDicd07026. Ribosomal_L20. 1 hit.
Gene3Di1.10.1900.20. 1 hit.
HAMAPiMF_00382. Ribosomal_L20. 1 hit.
InterProiView protein in InterPro
IPR005813. Ribosomal_L20.
IPR035566. Ribosomal_protein_L20_C.
PANTHERiPTHR10986. PTHR10986. 1 hit.
PfamiView protein in Pfam
PF00453. Ribosomal_L20. 1 hit.
PRINTSiPR00062. RIBOSOMALL20.
SUPFAMiSSF74731. SSF74731. 1 hit.
TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00937. RIBOSOMAL_L20. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P46246-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARVKRGVTA HARHKKVLKQ AKGYYGARSR IYRVACQAVI KAGQYAYRDR
60 70 80 90 100
RQRKRQFRQL WITRINAAVR QSQMSYSSFM YGLKKASINI DRKILSDIAI
110
FDGFSFNILI KKAKEALL
Length:118
Mass (Da):13,758
Last modified:January 23, 2007 - v3
Checksum:i64C38C0FA9AF0D24
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67688.1.
U11066 Genomic DNA. Translation: AAC43608.1.
PIRiI40074.
RefSeqiWP_011053655.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67688; AAM67688; BUsg_120.
KEGGibas:BUsg_120.

Similar proteinsi

Entry informationi

Entry nameiRL20_BUCAP
AccessioniPrimary (citable) accession number: P46246
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: January 23, 2007
Last modified: November 22, 2017
This is version 116 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families