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P46246

- RL20_BUCAP

UniProt

P46246 - RL20_BUCAP

Protein

50S ribosomal protein L20

Gene

rplT

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBAPH198804:GHMG-130-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L20
    Gene namesi
    Name:rplT
    Ordered Locus Names:BUsg_120
    OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
    Taxonomic identifieri198804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000000416: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 11811750S ribosomal protein L20PRO_0000177133Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi198804.BUsg120.

    Structurei

    3D structure databases

    ProteinModelPortaliP46246.
    SMRiP46246. Positions 2-117.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L20P family.Curated

    Phylogenomic databases

    eggNOGiCOG0292.
    KOiK02887.
    OMAiINAEARN.
    OrthoDBiEOG6CGCMB.

    Family and domain databases

    HAMAPiMF_00382. Ribosomal_L20.
    InterProiIPR005813. Ribosomal_L20.
    [Graphical view]
    PANTHERiPTHR10986. PTHR10986. 1 hit.
    PfamiPF00453. Ribosomal_L20. 1 hit.
    [Graphical view]
    PRINTSiPR00062. RIBOSOMALL20.
    TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
    PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P46246-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARVKRGVTA HARHKKVLKQ AKGYYGARSR IYRVACQAVI KAGQYAYRDR    50
    RQRKRQFRQL WITRINAAVR QSQMSYSSFM YGLKKASINI DRKILSDIAI 100
    FDGFSFNILI KKAKEALL 118
    Length:118
    Mass (Da):13,758
    Last modified:January 23, 2007 - v3
    Checksum:i64C38C0FA9AF0D24
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67688.1.
    U11066 Genomic DNA. Translation: AAC43608.1.
    PIRiI40074.
    RefSeqiNP_660477.1. NC_004061.1.
    WP_011053655.1. NC_004061.1.

    Genome annotation databases

    EnsemblBacteriaiAAM67688; AAM67688; BUsg_120.
    GeneIDi1005937.
    KEGGibas:BUsg120.
    PATRICi21247021. VBIBucAph100086_0124.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67688.1 .
    U11066 Genomic DNA. Translation: AAC43608.1 .
    PIRi I40074.
    RefSeqi NP_660477.1. NC_004061.1.
    WP_011053655.1. NC_004061.1.

    3D structure databases

    ProteinModelPortali P46246.
    SMRi P46246. Positions 2-117.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 198804.BUsg120.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM67688 ; AAM67688 ; BUsg_120 .
    GeneIDi 1005937.
    KEGGi bas:BUsg120.
    PATRICi 21247021. VBIBucAph100086_0124.

    Phylogenomic databases

    eggNOGi COG0292.
    KOi K02887.
    OMAi INAEARN.
    OrthoDBi EOG6CGCMB.

    Enzyme and pathway databases

    BioCyci BAPH198804:GHMG-130-MONOMER.

    Family and domain databases

    HAMAPi MF_00382. Ribosomal_L20.
    InterProi IPR005813. Ribosomal_L20.
    [Graphical view ]
    PANTHERi PTHR10986. PTHR10986. 1 hit.
    Pfami PF00453. Ribosomal_L20. 1 hit.
    [Graphical view ]
    PRINTSi PR00062. RIBOSOMALL20.
    TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
    PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Sg.
    2. "Aromatic amino acid biosynthesis in Buchnera aphidicola (endosymbiont of aphids): cloning and sequencing of a DNA fragment containing aroH-thrS-infC-rpmI-rplT."
      Kolibachuk D., Rouhbakhsh D., Baumann P.
      Curr. Microbiol. 30:313-316(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-27.

    Entry informationi

    Entry nameiRL20_BUCAP
    AccessioniPrimary (citable) accession number: P46246
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 95 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Buchnera aphidicola (subsp. Schizaphis graminum)
      Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3