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Protein

Sodium-type flagellar protein MotY

Gene

motY

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall.

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Flagellar rotation

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-2167-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Sodium-type flagellar protein MotY
Gene namesi
Name:motY
Ordered Locus Names:VP2111
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002493 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence AnalysisAdd
BLAST
Chaini22 – 293272Sodium-type flagellar protein MotYPRO_0000020136Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi223926.VP2111.

Structurei

3D structure databases

ProteinModelPortaliP46233.
SMRiP46233. Positions 22-292.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini175 – 292118OmpA-likePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the OmpA family.Curated
Contains 1 OmpA-like domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2885.
HOGENOMiHOG000279336.
OMAiMGETRNV.
OrthoDBiEOG6PP9QB.

Family and domain databases

Gene3Di3.30.1330.60. 1 hit.
InterProiIPR006690. OMPA-like_CS.
IPR006665. OmpA/MotB_C.
[Graphical view]
PfamiPF00691. OmpA. 1 hit.
[Graphical view]
SUPFAMiSSF103088. SSF103088. 1 hit.
PROSITEiPS01068. OMPA_1. 1 hit.
PS51123. OMPA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P46233-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKWLITSGV MLSLLSANSY AVMGKRYVAT PQQSQWEMVV NTPLECQLVH
60 70 80 90 100
PIPSFGDAVF SSRASKKINL DFELKMRRPM GETRNVSLIS MPPPWRPGEH
110 120 130 140 150
ADRITNLKFF KQFDGYVGGQ TAWGILSELE KGRYPTFSYQ DWQSRDQRIE
160 170 180 190 200
VALSSVLFQS KYNAFSDCIA NLLKYSFEDI AFTILHYERQ GDQLTKASKK
210 220 230 240 250
RLAQIADYVR HNQDIDLVLV ATYTDSTDGK SESQSLSERR AESLRTYFES
260 270 280 290
LGLPEDRIQV QGYGKRRPIA DNGTPIGKDK NRRVVISLGR TQV
Length:293
Mass (Da):33,406
Last modified:November 1, 1995 - v1
Checksum:iFD9F3A11BB5DCFA5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U06949 Genomic DNA. Translation: AAA21574.1.
BA000031 Genomic DNA. Translation: BAC60374.1.
RefSeqiNP_798490.1. NC_004603.1.
WP_005494483.1. NC_004603.1.

Genome annotation databases

EnsemblBacteriaiBAC60374; BAC60374; BAC60374.
GeneIDi1189623.
KEGGivpa:VP2111.
PATRICi20142382. VBIVibPar50997_2021.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U06949 Genomic DNA. Translation: AAA21574.1.
BA000031 Genomic DNA. Translation: BAC60374.1.
RefSeqiNP_798490.1. NC_004603.1.
WP_005494483.1. NC_004603.1.

3D structure databases

ProteinModelPortaliP46233.
SMRiP46233. Positions 22-292.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223926.VP2111.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC60374; BAC60374; BAC60374.
GeneIDi1189623.
KEGGivpa:VP2111.
PATRICi20142382. VBIVibPar50997_2021.

Phylogenomic databases

eggNOGiCOG2885.
HOGENOMiHOG000279336.
OMAiMGETRNV.
OrthoDBiEOG6PP9QB.

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-2167-MONOMER.

Family and domain databases

Gene3Di3.30.1330.60. 1 hit.
InterProiIPR006690. OMPA-like_CS.
IPR006665. OmpA/MotB_C.
[Graphical view]
PfamiPF00691. OmpA. 1 hit.
[Graphical view]
SUPFAMiSSF103088. SSF103088. 1 hit.
PROSITEiPS01068. OMPA_1. 1 hit.
PS51123. OMPA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "MotY, a component of the sodium-type flagellar motor."
    McCarter L.L.
    J. Bacteriol. 176:4219-4225(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: BB22.
  2. "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae."
    Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.
    Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RIMD 2210633.

Entry informationi

Entry nameiMOTY_VIBPA
AccessioniPrimary (citable) accession number: P46233
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: July 22, 2015
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.