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P46205 (CCMO_SYNE7) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein CcmO
Gene names
Name:ccmO
Ordered Locus Names:Synpcc7942_1425
OrganismSynechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) [Complete proteome] [HAMAP]
Taxonomic identifier1140 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length276 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Domain

Contains 2 homologous domains.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Ontologies

Keywords
   DomainRepeat
Signal
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 276247Uncharacterized protein CcmO
PRO_0000004789

Experimental info

Sequence conflict351Missing in AAA27327. Ref.1

Sequences

Sequence LengthMass (Da)Tools
P46205 [UniParc].

Last modified April 18, 2006. Version 2.
Checksum: F25514DB099D931F

FASTA27629,431
        10         20         30         40         50         60 
MSASLPAYSQ PRNAGALGVI CTRSFPAVVG TADMMLKSAD VTLIGYEKTG SGFCTAIIRG 

        70         80         90        100        110        120 
GYADIKLALE AGVATARQFE QYVSSTILPR PQGNLEAVLP ISRRLSQEAM ATRSHQNVGA 

       130        140        150        160        170        180 
IGLIETNGFP ALVGAADAML KSANVKLICY EKTGSGLCTA IVQGTVSNVT VAVEAGMYAA 

       190        200        210        220        230        240 
ERIGQLNAIM VIPRPLDDLM DSLPEPQSDS EAAQPLQLPL RVREKQPLLE LPELERQPIA 

       250        260        270 
IEAPRLLAEE RQSALELAQE TPLAEPLELP NPRDDQ 

« Hide

References

« Hide 'large scale' references
[1]"The 5'-flanking region of the gene encoding the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is crucial for growth of the cyanobacterium Synechococcus sp. strain PCC 7942 at the level of CO2 in air."
Friedberg D., Kaplan A., Ariel R., Kessel M., Seijffers J.
J. Bacteriol. 171:6069-6076(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 7942.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M30808 Genomic DNA. Translation: AAA27327.1.
CP000100 Genomic DNA. Translation: ABB57455.1.
RefSeqYP_400442.1. NC_007604.1.

3D structure databases

ProteinModelPortalP46205.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1140.Synpcc7942_1425.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB57455; ABB57455; Synpcc7942_1425.
GeneID3773597.
KEGGsyf:Synpcc7942_1425.
PATRIC23788199. VBISynElo51371_1626.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000035855.
KOK08700.
OrthoDBEOG6ZH2H4.

Enzyme and pathway databases

BioCycSYNEL:SYNPCC7942_1425-MONOMER.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 2 hits.
[Graphical view]
SMARTSM00877. BMC. 2 hits.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCCMO_SYNE7
AccessionPrimary (citable) accession number: P46205
Secondary accession number(s): Q31NB4
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: April 18, 2006
Last modified: May 14, 2014
This is version 62 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families